Section for Plant and Soil Sciences

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  1. Published

    Transcriptome analysis sheds light on the Serendipita indica-tomato interaction

    Ntana, F., Jensen, Birgit, Jørgensen, Hans Jørgen Lyngs, Collinge, David B. & Hamberger, B., 2017, Microbe-assisted crop production - opportunities, challenges & needs: abstract book 2017. miCROPe, p. 119 1 p.

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  2. Published

    Transcriptome Analysis Reveals Candidate Genes Related to Anthocyanin Biosynthesis in Different Carrot Genotypes and Tissues

    Meng, G., Clausen, S. K. & Rasmussen, S. K., 2020, In: Plants. 9, 17 p., 344.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Transcriptional reprogramming of wheat and the hemibiotrophic pathogen Septoria tritici during two phases of the compatible interaction

    Yang, F., Li, W. & Jørgensen, Hans Jørgen Lyngs, 2013, In: P L o S One. 8, 11, 15 p., e81606.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Trans-kingdom cross-talk: small RNAs on the move

    Knip, M., Constantin, M. & Thordal-Christensen, Hans, 2014, In: PLoS Genetics. 10, 9, 7 p., e1004602.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Trait Expression and Environmental Responses of Pea (Pisum sativum L.) Genetic Resources Targeting Cultivation in the Arctic

    Carlson-Nilsson, U., Aloisi, K., Vågen, I. M., Rajala, A., Mølmann, J. B., Rasmussen, S. K., Niemi, M., Wojciechowska, E., Pärssinen, P., Poulsen, G. & Leino, M. W., 2021, In: Frontiers in Plant Science. 12, 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Towards single-cell ionomics: a novel micro-scaled method for multi-element analysis of nanogram-sized biological samples

    Chen, A., Hansen, Thomas Hesselhøj, Olsen, L. I., Palmgren, Michael, Husted, Søren, Schjoerring, Jan K. & Persson, Daniel Pergament, 2020, In: Plant Methods. 16, 13 p., 31.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Towards integrated cover crop management: N, P and S release from aboveground and belowground residues

    Hansen, Veronika, Eriksen, J., Jensen, Lars Stoumann, Thorup-Kristensen, Kristian & Magid, Jakob, 2021, In: Agriculture, Ecosystems and Environment. 313, 11 p., 107392.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Towards an Integration of the Physical and the Genetic Chromosome Maps of Barley by in Situ Hybridization

    Pedersen, Carsten, Giese, H. & Linde‐Laursen, I., 1 Jan 1995, In: Hereditas. 123, 1, p. 77-88 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Toward a sustainable biorefinery using high-gravity technology

    Xiros, C., Janssen, M., Byström, R., Børresen, B. T., Cannella, D., Jørgensen, H., Koppram, R., Larsson, C., Olsson, L., Tillman, A. & Wännström, S., 2017, In: Biofuels, Bioproducts and Biorefining. 11, 1, p. 15-27 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Topical delivery of PD-1 inhibitors with laser-assisted passive diffusion and active intradermal injection: Investigation of cutaneous pharmacokinetics and biodistribution patterns

    Christensen, R. L., Hendel, K. K., Persson, Daniel Pergament, Husted, Søren, Olesen, U. H. & Hædersdal, Merete, 2022, In: Lasers in Surgery and Medicine. 54, 1, p. 170-181

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Topical Delivery of Nivolumab, a Therapeutic Antibody, by Fractional Laser and Pneumatic Injection

    Christensen, R. L., Omland, S. H., Persson, Daniel Pergament, Husted, Søren, Hædersdal, Merete & Olesen, U. H., 2021, In: Lasers in Surgery and Medicine. 53, 1, p. 154-161 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Tonoplast aquaporins facilitate lateral root emergence

    Reinhardt, H., Hachez, C., Bienert, M. D., Beebo, A., Swarup, K., Voß, U., Bouhidel, K., Frigerio, L., Schjoerring, Jan K., Bennett, M. J. & Chaumont, F., 2016, In: Plant Physiology. 170, 3, p. 1640-1654 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    To target or not to target? Definitions and nomenclature for targeted versus non-targeted analytical food authentication

    Laursen, Kristian Holst & Z. Ballin, N., 2018, p. 114-115. 2 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  14. Published

    To target or not to target? Definitions and nomenclature for targeted versus non-targeted analytical food authentication

    Ballin, N. Z. & Laursen, Kristian Holst, 2019, In: Trends in Food Science and Technology. 86, p. 537-543

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Tissue specific ionomic analysis of barley (Hordeum vulgare) root tissue using Laser Microdissection (LMD) and ICP-MS

    Chen, A., Hansen, Thomas Hesselhøj, Persson, Daniel Pergament, Schjoerring, Jan K. & Husted, Søren, 2017, Proceedings Book: XVIII International Plant Nutrition Colloquium with Boron and Manganese Satellite Meetings. Carstensen, A., Laursen, K. H. & Schjoerring, J. K. (eds.). University of Copenhagen, p. 831-832 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  16. Published

    Three differentially expressed basic peroxidases from wound-lignifying Asparagus officinalis

    Holm, Kirsten, Andreasen, P. H., Eckloff, R. M. G., Kristensen, B. K. & Rasmussen, S. K., 1 Oct 2003, In: Journal of Experimental Botany. 54, 391, p. 2275-2284 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Three different Fourier-transform mid-infrared sampling techniques to characterize bio-organic samples

    Bekiaris, G., Peltre, C., Barsberg, S. T., Bruun, Sander, Sørensen, Klavs Martin, Engelsen, Søren Balling, Magid, Jakob, Hansen, M. & Jensen, Lars Stoumann, 2020, In: Journal of Environmental Quality. 49, 5, p. 1310-1321 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Threatened status of neglected and underutilised Jatropha (Euphorbiaceae) species endemic to Mexico

    Christensen, C. S. L., Seal, C. E. & Rico-Arce, L., 2019, In: Revista Mexicana de Biodiversidad. 90, p. 1-16 e902903.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Thlaspi caerulescens, an attractive model species to study heavy metal hyperaccumulation in plants

    Assuncao, Ana, Schat, H. & Aarts, M. G. M., 1 Aug 2003, In: New Phytologist. 159, 2, p. 351-360 10 p.

    Research output: Contribution to journal › Review › Research › peer-review

  20. Published

    Thermochemical treatment of biogas digestate solids to produce organic fertilisers: The effect of acidification and drying on N losses, soil N turnover and plant fertilizer value

    Pantelopoulos, A., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 118 p.

    Research output: Book/Report › Ph.D. thesis › Research

  21. Published

    Thermal drying of the solid fraction from biogas digestate: effects of acidification, temperature and ventilation on nitrogen content

    Pantelopoulos, A., Magid, Jakob & Jensen, Lars Stoumann, 2016, In: Waste Management. 48, p. 218-226 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    The use of agro-ecological methods in organic farming

    Qiao, Y., Halberg, N. & Oelofse, M., 2013, Organic agriculture for sustainable livelihoods. Halberg, N. & Muller, A. (eds.). Routledge, p. 79-100 22 p. (Earthscan Food and Agriculture).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  23. Published

    The use of AFLP markers to elucidate relationships within Cryptocoryne (Araceae)

    Jacobsen, Niels, Bastmeijer, J., Christensen, C., Idei, T., Lange, Conny Bruun Asmussen, Orabi, J., Sookchaloem, D., Toneatto, F. & Ørgaard, Marian, 2015, In: Aroideana. 38E, 1, p. 186-193 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    The transporter SynPAM71 is located in the plasma membrane and thylakoids, and mediates manganese tolerance in Synechocystis PCC6803

    Gandini, C., Schmidt, Sidsel Birkelund, Husted, Søren, Schneider, A. & Leister, D., 2017, In: New Phytologist. 215, 1, p. 256-268 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    The stripe rust fungal effector PEC6 suppresses pattern-triggered immunity in a host species-independent manner and interacts with adenosine kinases

    Liu, C., Pedersen, Carsten, Schultz-Larsen, T., Aguilar, G. B., Hovmøller, M. S., Thordal-Christensen, Hans & Madriz Ordenana, Kenneth, 2016, In: New Phytologist. 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    The status and prospects for biotechnological approaches for attaining sustainable disease resistance

    Collinge, David B., Mullins, E., Jensen, Birgit & Jørgensen, Hans Jørgen Lyngs, 2016, Plant pathogen resistance biotechnology. Collinge, D. B. (ed.). Wiley-Blackwell, p. 1-20 20 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  27. Published

    The source of inorganic nitrogen has distinct effects on cell wall composition in Brachypodium distachyon

    Głazowska, S., Baldwin, L., Mravec, Jozef, Bukh, C., Fangel, J. U., Willats, W. G. & Schjoerring, Jan K., 1 Nov 2019, In: Journal of Experimental Botany. 70, 21, p. 6461-6473

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    The slippery slope of cisgenesis

    Eriksson, U. D., Stymne, S. & Schjoerring, Jan K., 2014, In: Nature Biotechnology. 32, 1 p., 727.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  29. Published

    The search for candidate genes associated with natural variation of grain Zn accumulation in barley

    Detterbeck, A., Nagel, M., Rensch, S., Weber, M., Börner, A., Persson, Daniel Pergament, Schjoerring, Jan K., Christov, V. & Clemens, S., 2 Jul 2019, In: Biochemical Journal. 476, 13, p. 1889-1909

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    The root external mycelium of mycorrhizal fungi has a key role in plant nutrition but is suppressed by the soil microbiota

    Cruz Paredes, C., Watts-Williams, S. J., Battini, F., Joner, E. J., Svenningsen, N. B., Dela Cruz, Majbrit, Christensen, Jan H., Nybroe, O. & Jakobsen, Iver, 2017, Proceedings Book: XVIII International Plant Nutrition Colloquium with Boron and Manganese Satellite Meetings. Carstensen, A., Laursen, K. H. & Schjoerring, J. K. (eds.). University of Copenhagen, p. 116-117 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  31. Published

    The roles of mycorrhiza and Penicillium inoculants in phosphorus uptake by biochar-amended wheat

    Efthymiou, A., Jensen, Birgit & Jakobsen, Iver, 2018, In: Soil Biology & Biochemistry. 127, p. 168-177

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    The role of waste biorefineries towards climate neutrality: Insights from a life cycle perspective

    Ravi, Rahul, 2024, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 146 p.

    Research output: Book/Report › Ph.D. thesis › Research

  33. Published

    The role of soil in defining planetary boundaries and the safe operating space for humanity

    Kopittke, P. M., Menzies, N. W., Dalal, R. C., McKenna, B. A., Husted, Søren, Wang, P. & Lombi, E., 2021, In: Environment International. 146, 8 p., 106245.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    The role of local government in promoting sustainable urban agriculture in Dar es Salaam and Copenhagen

    Halloran, A. M. S. & Magid, Jakob, 2013, In: Geografisk Tidsskrift. 113, 2, p. 121-132 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    The responses of plants to pathogens

    Collinge, David B., Borch, J., Madriz Ordenana, Kenneth & Newman, Mari-Anne, 2001, Molecular analysis of plant adaptation to the environment. Hawkesford, M. J. & Buchner, P. (eds.). Kluwer Academic Publishers Group, Vol. 1. p. 131-158 28 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Communication

  36. Published

    The relationship between physical and genetic distances at the Hor1 and Hor2 loci of barley estimated by two-colour fluorescent in situ hybridization

    Pedersen, Carsten & Linde-Laursen, I., 1 Nov 1995, In: Theoretical and Applied Genetics. 91, 6-7, p. 941-946 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    The potential of laser-induced breakdown spectroscopy for industrial at-line monitoring of calcium content in comminuted poultry meat

    Andersen, M. S., Frydenvang, Jens, Henckel, P. & Rinnan, Åsmund, 2016, In: Food Control. 64, p. 226-233 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    The potential of Fusarium oxysporum f.sp. orthoceras as a biological control agent for Orobanche cumana in sunflower

    Thomas, H., Sauerborn, J., Müller-Stöver, Dorette Sophie, Ziegler, A., Bedi, J. & Kroschel, J., Sep 1998, In: Biological Control. 13, 1, p. 41-48

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    The potential for biorefining of triticale to protein and sugar depends on nitrogen supply and harvest time

    Jørgensen, H., Thomsen, Sune Tjalfe & Schjoerring, Jan K., 2020, In: Industrial Crops and Products. 112333.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    The plastid envelope chloroplast manganese transporter1 is essential for manganese homeostasis in Arabidopsis

    Eisenhut, M., Hoecker, N., Schmidt, Sidsel Birkelund, Basgaran, R. M., Flachbart, S., Jahns, P., Eser, T., Geimer, S., Husted, Søren, Webers, A. P. M., Leister, D. & Schneider, A., 2018, In: Molecular Plant. 11, 7, p. 955-969 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    The plant membrane surrounding powdery mildew haustoria shares properties with the endoplasmic reticulum membrane

    Kwaaitaal, M. A. C. J., Nielsen, Mads Eggert, Böhlenius, H. & Thordal-Christensen, Hans, 2017, In: Journal of Experimental Botany. 68, 21-22, p. 5731-5743 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    The oxygen isotopic signature of soil- and plant-derived sulphate is controlled by fertilizer type and water source

    Novak, V., Khatri, P. K. & Laursen, Kristian Holst, 2021, In: Plant, Cell and Environment. 44, 1, p. 203-215 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    The nature of induced defences in plants

    Collinge, David B., Andersen, C. H., Bryngelsson, T., Bentsen Christensen, A., Gregersen, P. L., Madriz Ordenana, Kenneth, Smedegaard-Petersen, V., Zhang, Z. & Thordal-Christensen, Hans, 1995, In: Aktuelt fra Skogforsk. 6, p. 4-5 2 p.

    Research output: Contribution to journal › Journal article › Communication

  44. Published

    The molecular–physiological functions of mineral macronutrients and their consequences for deficiency symptoms in plants

    de Bang, T. C., Husted, Søren, Laursen, Kristian Holst, Persson, Daniel Pergament & Schjoerring, Jan K., 2021, In: New Phytologist. 229, 5, p. 2446-2469 24 p.

    Research output: Contribution to journal › Review › Research › peer-review

  45. Published

    The molecular characterization of two barley proteins establishes the novel PR-17 family of pathogenesis-related proteins

    Christensen, A. B., Cho, B., Naesby, M., Gregersen, P., Brandt, J., Madriz Ordenana, Kenneth, Collinge, David B. & Thordal-Christensen, Hans, May 2002, In: Molecular Plant Pathology. 3, 3, p. 135-144

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    The last swiddens of Sarawak, Malaysia

    Mertz, Ole, Egay, K., Bruun, Thilde Bech & Colding, T. S., 2013, In: Human Ecology: An Interdisciplinary Journal. 41, 1, p. 109-118 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    The isoelectric point of proteins influences their translocation to the extrahaustorial matrix of the barley powdery mildew fungus

    Smigielski, L., Aguilar, G. B., Kwaaitaal, M., Zhang, W. & Thordal-Christensen, Hans, 2019, In: Cellular Microbiology. 21, 12, 31 p., e13091.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    The iron-regulated transporter 1 plays an essential role in uptake, translocation and grain-loading of manganese, but not iron, in barley

    Long, L., Persson, Daniel Pergament, Duan, F., Jørgensen, Kirsten, Yuan, L., Schjoerring, Jan K. & Pedas, P. R., 2018, In: New Phytologist. 217, 4, p. 1640-1653 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    The iron-regulated transporter 1 (IRT1) plays an essential role in uptake, translocation and grain-loading of manganese in barley

    Long, L., Persson, Daniel Pergament, Duan, F., Jørgensen, Kirsten, Yuan, L., Schjoerring, Jan K. & Pedas, P. R., 2017, Proceedings Book: XVIII International Plant Nutrition Colloquium with Boron and Manganese Satellite Meetings. Carstensen, A., Laursen, K. H. & Schjoerring, J. K. (eds.). University of Copenhagen, p. 917-918 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  50. Published

    The intracellular localization of the vanillin biosynthetic machinery in pods of Vanilla planifolia

    Gallage, N. J., Jørgensen, Kirsten, Janfelt, Christian, Nielsen, A. J. Z., Naake, T., Dunski, E., Dalsten, L., Grisoni, M. & Møller, Birger Lindberg, 2018, In: Plant and Cell Physiology. 59, 2, p. 304-318 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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