Section for Plant and Soil Sciences

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  1. Published

    The influence of the pig manure separation system on the energy production potentials

    Wnetrzak, R., Kwapinski, W., Peters, K., Sommer, S. G., Jensen, Lars Stoumann & Leahy, J. J., 2013, In: Bioresource Technology. 136, p. 502-508 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    The importance of manganese in photosynthesis - perspectives for improving manganese efficiency in plants

    Schmidt, Sidsel Birkelund, Brown, L. K., Booth, A., Wishart, J., Martin, P., Hedley, P. E., Russell, J., George, T. S. & Husted, Søren, 2017, Proceedings Book: XVIII International Plant Nutrition Colloquium with Boron and Manganese Satellite Meetings. Carstensen, A., Laursen, K. H. & Schjoerring, J. K. (eds.). University of Copenhagen, p. 925-926 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  3. Published

    The implications of phasing out conventional nutrient supply in organic agriculture: Denmark as a case

    Oelofse, M., Jensen, Lars Stoumann & Magid, Jakob, 2013, In: Organic Agriculture - Official journal of The International Society of Organic Agriculture Research. 3, 1, p. 41-55 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    The impacts of phosphorus deficiency on the photosynthetic electron transport chain

    Carstensen, A., Herdean, A., Schmidt, Sidsel Birkelund, Sharma, A., Spetea, C., Pribil, Mathias & Husted, Søren, 2018, In: Plant Physiology. 177, p. 271-284 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    The impact of silicon on cell wall composition and enzymatic saccharification of Brachypodium distachyon

    Glazowska, S. E., Baldwin, L. A., Mravec, Jozef, Bukh, C., Hansen, Thomas Hesselhøj, Jensen, M. M., Fangel, J. U., Willats, W. G. T., Glasius, M., Felby, C. & Schjoerring, Jan K., 20 Jun 2018, In: Biotechnology for Biofuels. 11, 18 p., 171.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    The impact of certification on the natural and financial capitals of Ghanaian cocoa farmers

    Fenger, N. A., Bosselmann, Aske Skovmand, Richard, A. & de Neergaard, Andreas, 2017, In: Agroecology and Sustainable Food Systems. 41, 2, p. 143-166 24 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    The impact of black wattle encroachment of indigenous grasslands on soil carbon, Eastern Cape, South Africa

    Oelofse, M., Birch-Thomsen, Torben, Magid, Jakob, de Neergaard, Andreas, van Deventer, R., Bruun, Sander & Hill, T., 2016, In: Biological Invasions. 18, 2, p. 445-456 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    The germinlike protein GLP4 exhibits superoxide dismutase activity and is an important component of quantitative resistance in wheat and barley

    Christensen, Anders, Thordal-Christensen, Hans, Zimmermann, G., Gjetting, T., Lyngkjær, M. F., Dudler, R. & Schweizer, P., 2004, In: Molecular Plant - Microbe Interactions. 17, 1, p. 109-117 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    The fungal endophyte Penicillium olsonii ML37 reduces Fusarium head blight by local induced resistance in wheat spikes

    Rojas, E. C., Jensen, Birgit, Jørgensen, Hans Jørgen Lyngs, Latz, Meike, Esteban, P. & Collinge, David B., 2022, In: Journal of Fungi. 8, 4, 17 p., 345.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    The fungal endophyte Penicillium olsonii ML37 reduces Fusarium head blight by local induced resistance in wheat spikes

    Rojas Tayo, E. C., Jensen, Birgit, Jørgensen, Hans Jørgen Lyngs, Latz, Meike, Esteban, P. & Collinge, David B., 2021. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  11. Published

    The extrahaustorial membrane of barley powdery mildew – new insights into transport mechanisms and membrane characteristics

    Smigielski, L., 2020, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  12. Published

    The evolutionarily conserved protein PHOTOSYNTHESIS AFFECTED MUTANT71 is required for efficient manganese uptake at the thylakoid membrane in Arabidopsis

    Schneider, A., Steinberger, I., Herdean, A., Gandini, C., Eisenhut, M., Kurz, S., Morper, A., Hoecker, N., Rühle, T., Labs, M., Flügge, U. I., Geimer, S., Schmidt, Sidsel Birkelund, Husted, Søren, Weber, A. P. M., Spetea, C. & Leister, D. M., 2016, In: Plant Cell. 28, 4, p. 892-910 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    The evolution of plant proton pump regulation via the R domain may have facilitated plant terrestrialization

    Stéger, A., Hayashi, M., Lauritzen, E. W., Herburger, K., Shabala, L., Wang, Cuiwei, Bendtsen, Amalie Kofoed, Nørrevang, Anton Frisgaard, Madriz Ordenana, Kenneth, Ren, S., Trinh, Mai Duy Luu, Thordal-Christensen, Hans, Fuglsang, Anja Thoe, Shabala, S., Østerberg, J. T. & Palmgren, Michael, 2022, In: Communications Biology . 5, 15 p., 1312.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    The effects of straw or straw-derived gasification biochar applications on soil quality and crop productivity: a farm case study

    Hansen, Veronika, Müller-Stöver, Dorette Sophie, Imparato, V., Krogh, P. H., Jensen, Lars Stoumann, Dolmer, A. & Hauggaard-Nielsen, H., 2017, In: Journal of Environmental Management. 186, Part 1, p. 88-95 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    The effects of management practices on soil organic carbon stocks of oil palm plantations in Sumatra, Indonesia

    Rahman, N., Giller, K. E., de Neergaard, Andreas, Magid, Jakob, van de Ven, G. & Bruun, Thilde Bech, 2021, In: Journal of Environmental Management. 278, 9 p., 111446.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    The effects of long-term mineral and organic input history on phosphorus availability and speciation

    van der Bom, Frederik, McLaren, T., Doolette, A. L., Magid, Jakob, Frossard, E., Oberson, A. & Jensen, Lars Stoumann, 2017, Proceedings Book XVIII International Plant Nutrition Colloquium: with Boron and Manganese Satellite Meeting. Copenhagen: Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  17. Published

    The effective mitigation of greenhouse gas emissions from rice paddies without compromising yield by early-season drainage

    Islam, S. F., van Groenigen, J. W., Jensen, Lars Stoumann, Sander, B. O. & de Neergaard, Andreas, 15 Jan 2018, In: Science of the Total Environment. 612, p. 1329-1339 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    The effect of straw and wood gasification biochar on carbon sequestration, selected soil fertility indicators and functional groups in soil: an incubation study

    Hansen, Veronika, Müller-Stöver, Dorette Sophie, Munkholm, L. J., Peltre, C., Hauggaard-Nielsen, H. & Jensen, Lars Stoumann, 2016, In: Geoderma. 269, p. 99-107 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    The effect of organic amendments and water pulses on GHG emissions from rice production systems

    Tariq, Azeem, Jensen, Lars Stoumann, de Tourdonnet, S., Wassmann, R., Sander, B. O., Islam, S. F. & de Neergaard, Andreas, 2015.

    Research output: Contribution to conference › Poster › Research › peer-review

  20. Published

    The effect of different pyrolysis temperatures on the speciation and availability in soil of P in biochar produced from the solid fraction of manure

    Bruun, Sander, Harmer, S. L., Bekiaris, G., Christel, W., Zuin, L., Hu, Y., Jensen, Lars Stoumann & Lombi, E., 2017, In: Chemosphere. 169, p. 377-386 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    The effect of Penicillium bilaii on wheat growth and phosphorus uptake as affected by soil pH, soil P and application of sewage sludge

    Sánchez-Esteva, S., Gomez Muñoz, B., Jensen, Lars Stoumann, de Neergaard, Andreas & Magid, Jakob, 2016, In: Chemical and Biological Technologies in Agriculture. 3, 1, 11 p., 21.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    The different effects of applying fresh, composted or charred manure on soil N2O emissions

    Zhu, K., Christel, W., Bruun, Sander & Jensen, Lars Stoumann, 2014, In: Soil Biology & Biochemistry. 74, p. 61-69 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    The complexity of wood ash fertilization disentangled: Effects on soil pH, nutrient status, plant growth and cadmium accumulation

    Johansen, Jesper Liengaard, Nielsen, M. L., Vestergård, M., Mortensen, Louise Hindborg, Cruz-Paredes, C., Rønn, Regin, Kjøller, Rasmus, Hovmand, Mads Frederik, Christensen, Søren & Ekelund, Flemming, 2021, In: Environmental and Experimental Botany. 185, 9 p., 104424.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    The biochemical properties of manganese in plants

    Schmidt, Sidsel Birkelund & Husted, Søren, 27 Sep 2019, In: Plants. 8, 10, p. 1-15 381.

    Research output: Contribution to journal › Review › Research › peer-review

  25. Published

    The bifurcation of the cyanogenic glucoside and glucosinolate biosynthetic pathways

    Sørensen, Mette, Kannangara, R. M., Olsen, C. E., Blomstedt, C. K., Gleadow, R. M., Jørgensen, Kirsten, Bak, Søren, Motawie, Mohammed Saddik & Møller, Birger Lindberg, 2015, In: The Plant Journal. 84, 3, p. 558-573 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    The barley powdery mildew effector candidates CSEP0081 and CSEP0254 promote fungal infection success

    Ahmed, A. A., Pedersen, Carsten & Thordal-Christensen, Hans, 2016, In: P L o S One. 11, 6, 12 p., e0157586.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    The barley powdery mildew candidate secreted effector protein CSEP0105 inhibits the chaperone activity of a small heat shock protein

    Ahmed, A. A., Pedersen, Carsten, Schultz-Larsen, T., Kwaaitaal, M. A. C. J., Jørgensen, Hans Jørgen Lyngs & Thordal-Christensen, Hans, 2015, In: Plant Physiology. 168, 1, p. 321-333 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    The alleviating effect of elevated CO2 on heat stress susceptibility of two wheat (Triticum aestivum L.) cultivars

    Shanmugam, S., Kjær, K. H., Ottosen, C., Rosenqvist, Eva, Sharma, D. K. & Wollenweber, B., 2013, In: Journal of Agronomy and Crop Science. 199, 5, p. 340-350 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    The State of Play of Copper, Mineral Oil, External Nutrient Input, Anthelmintics, Antibiotics and Vitamin Usage and Available Reduction Strategies in Organic Farming across Europe

    Varga, K., Fehér, J., Trugly, B., Drexler, D., Leiber, F., Verrastro, V., Magid, Jakob, Chylinski, C., Athanasiadou, S., Thuerig, B., László, A., Ladányi, M., Moeskops, B., Herforth-Rahmé, J. & Tamm, L., 2022, In: Sustainability. 14, 6, 36 p., 3182.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    The Role of Soil Organic Matter for Maintaining Crop Yields: Evidence for a Renewed Conceptual Basis

    Schjønning, P., Jensen, J. L., Bruun, Sander, Jensen, Lars Stoumann, Christensen, B. T., Munkholm, L. J., Oelofse, M., Baby, S. & Knudsen, L., 2018, Advances in Agronomy. Academic Press, p. 35-79 (Advances in Agronomy, Vol. 150).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  31. Published

    The Intensity of Manganese Deficiency Strongly Affects Root Endodermal Suberization and Ion Homeostasis

    Chen, A., Husted, Søren, Salt, D. E., Schjoerring, Jan K. & Persson, Daniel Pergament, Oct 2019, In: Plant Physiology. 181, 2, p. 729-742

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    The Genome of BAM-degrading Aminobacter sp. MSH1 with Several Low Copy Plasmids

    Nielsen, Tue Kjærgaard, Hylling, Ole & Ellegaard-Jensen, L., 2018, 12 p.

    Research output: Working paper › Preprint › Research

  33. Published

    The F-bZIP-regulated Zn deficiency response in land plants

    Assuncao, Ana, 2022, In: Planta. 256, 6, 108.

    Research output: Contribution to journal › Review › Research › peer-review

  34. Published

    The Effects of Management Practices on Soil Organic Carbon Stocks in Oil Palm Plantation

    Niharika Rahman, Jakob Magid, Andreas de Neergaard, Ken Giller, Thilde Bech Bruun, N. R. J. M. A. D. N. K. G. T. B. B., 2014.

    Research output: Contribution to conference › Poster › Research

  35. Published

    The Effect of Gasification Biochar on Soil Carbon Sequestration, Soil Quality and Crop Growth

    Hansen, Veronika, 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  36. Published

    The CUP-SHAPED COTYLEDON3 gene is required for boundary and shoot meristem formation in Arabidopsis

    Vroemen, C. W., Mordhorst, A. P., Albrecht, C., Kwaaitaal, M. A. C. J. & de Vries, S. C., Jul 2003, In: Plant Cell. 15, 7, p. 1563-77 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    The CLE53-SUNN genetic pathway negatively regulates arbuscular mycorrhiza root colonization in Medicago truncatula

    Karlo, M., Boschiero, C., Landerslev, K. G., Blanco, G. S., Wen, J., Mysore, K. S., Dai, X., Zhao, P. X. & de Bang, T. C., 2020, In: Journal of Experimental Botany. 71, 16, p. 4972-4984 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    The Arabidopsis bZIP19 and bZIP23 Activity Requires Zinc Deficiency – Insight on Regulation From Complementation Lines

    Lilay, Grmay Hailu, Castro, P. H., Campilho, A. & Assuncao, Ana, 2019, In: Frontiers in Plant Science. 9, p. 1-13 1955.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    The AMSH3 ESCRT-III-Associated Deubiquitinase Is Essential for Plant Immunity

    Schultz-Larsen, T., Lenk, Andrea, Kalinowska, K., Vestergaard, L. K., Pedersen, Carsten, Isono, E. & Thordal-Christensen, Hans, 2018, In: Cell Reports. 25, 9, p. 2329-2338.e5 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    The Bacillus cereus Strain EC9 Primes the Plant Immune System for Superior Biocontrol of Fusarium oxysporum

    Madriz Ordenana, Kenneth, Pazarlar, S., Jørgensen, Hans Jørgen Lyngs, Nielsen, Tue Kjærgaard, Zhang, Y., Nielsen, K. L., Hansen, Lars Hestbjerg & Thordal-Christensen, Hans, 2022, In: Plants. 11, 5, 19 p., 687.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Testing for plant available phosphorus in soils

    Mundus, S., Carstensen, A. & Husted, Søren, 2013, In: International Fertiliser Society. Proceedings. 738, p. 2-24 23 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  42. Published

    Testing biowaste materials as peat replacement in organo-mineral fertilizers

    Sitzmann, T. J., Sica, P., Grignani, C. & Magid, Jakob, 2024, In: Frontiers in Sustainable Food Systems. 8, 11 p., 1330843.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Test of efficacy of cellulases for biomass degradation

    Jørgensen, H., 2018, Cellulases: methods and protocols. Lübeck, M. (ed.). Springer, p. 283-297 (Methods in Molecular Biology, Vol. 1796).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  44. Published

    Temporal effects of thinning on soil organic carbon and carbon cycling-related enzyme activities in oak-pine mixed forests

    Li, Y., Ajloon, F. H., Wang, X., Malghani, Saadatullah, Yu, S., Ma, X., Li, Y. & Wang, W., 2023, In: Forest Ecology and Management. 545, 9 p., 121293.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Temporal and Spatial Patterns of Zinc and Iron Accumulation during Barley (Hordeum vulgare L.) Grain Development

    Detterbeck, A., Pongrac, P., Persson, Daniel Pergament, Vogel-Mikus, K., Kelemen, M., Vavpetic, P., Pelicon, P., Arcon, I., Husted, Søren, Schjoerring, Jan K. & Clemens, S., 2020, In: Journal of Agricultural and Food Chemistry. 68, 44, p. 12229-12240 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    TILLING in plant disease control: applications and perspectives

    Desiderio, F., Torp, A. M., Vale, G. & Rasmussen, S. K., 2016, Plant pathogen resistance biotechnology. Collinge, D. B. (ed.). Wiley-Blackwell, p. 365-384 20 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  47. Published

    TILLING in Brachypodium distachyon

    de Bang, L., Torp, A. M. & Rasmussen, S. K., 2017, Brachypodium genomics: methods and protocols. Sablok, G., Budak, H. & Ralph, P. J. (eds.). Springer, p. 173-186 14 p. (Methods in Molecular Biology, Vol. 1667).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  48. Published

    Synthesis of new MKC-442 analogues containing alkenyl chains or reactive functionalities at C-5

    Petersen, L., Hansen, Thomas Hesselhøj, Khalifa, N. M., Jørgensen, P. T., Pedersen, E. B. & Nielsen, C., 1 Jan 2002, In: Monatshefte fur Chemie. 133, 7, p. 1031-1043 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. E-pub ahead of print

    Sustainable growth of organic farming in the EU requires a rethink of nutrient supply

    Reimer, M., Oelofse, M., Müller-Stöver, Dorette Sophie, Möller, K., Bünemann, E. K., Bianchi, S., Vetemaa, A., Drexler, D., Trugly, B., Raskin, B., Blogg, H., Rasmussen, A., Verrastro, V. & Magid, Jakob, 2023, (E-pub ahead of print) In: Nutrient Cycling in Agroecosystems.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Survival of chicken ascarid eggs exposed to different soil types and fungi

    Thapa, S., Mejer, Helena, Thamsborg, Stig Milan, Lekfeldt, J. D. S., Wang, R., Jensen, Birgit, Magid, Jakob & Meyling, Nicolai Vitt, 2017, In: Agriculture, Ecosystems & Environment. 121, p. 143-151 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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