Section for Molecular Plant Biology

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  1. Published

    the role of GTR importers in rhizosecretion of glucosinolates in arabidopsis

    Xu, Deyang, Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2016.

    Research output: Contribution to conference › Conference abstract for conference › Research

  2. Published

    mGWAS Uncovers Gln-Glucosinolate Seed-Specific Interaction and its Role in Metabolic Homeostasis

    Slaten, M. L., Yobi, A., Bagaza, C., Chan, Y. O., Shrestha, V., Holden, S., Katz, E., Kanstrup, Christa, Lipka, A. E., Kliebenstein, D. J., Nour-Eldin, Hussam Hassan & Angelovici, R., 2020, In: Plant Physiology. 183, 2, p. 483-500 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    cDNA, amino acid and carbohydrate sequence of barley seed-specific peroxidase BP 1

    Johansson, A., Rasmussen, S. K., Harthill, J. E. & Welinder, K. G., 1 Apr 1992, In: Plant Molecular Biology. 18, 6, p. 1151-1161 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    cDNA library screening to identify interacting proteins of Golgi-localized type II membrane proteins

    Lund, C. H., Bromley, J. R., Lopez Marques, Rosa Laura & Sakuragi, Y., 2020, 15 p. (bioRxiv).

    Research output: Working paper › Preprint › Research

  5. Published

    cDNA cloning and characterization of two barley peroxidase transcripts induced differentially by the powdery mildew fungus Erysiphe graminis

    Thordal-Christensen, Hans, Brandt, J., Cho, B. H., Rasmussen, S. K., Gregersen, P. L., Smedegaard-Petersen, V. & Collinge, David B., 1 Jan 1992, In: Physiological and Molecular Plant Pathology. 40, 6, p. 395-409 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Winter fields antisense RNAs to kick off flowering

    Jin, Yu & Marquardt, Sebastian, 2021, In: Genes and Development. 38, 11-12, p. 785-786 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Vitamin D-5 in Arabidopsis thaliana

    Silvestro, D., Villette, C., Delecolle, J., Olsen, C. E., Motawie, Mohammed Saddik, Geoffroy, P., Miesch, M., Jensen, Poul Erik, Heintz, D. & Schaller, H., 2018, In: Scientific Reports. 8, p. 1-8 16348.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    VC1 catalyses a key step in the biosynthesis of vicine in faba bean

    Björnsdotter, E., Nadzieja, M., Chang, W., Escobar-Herrera, L., Mancinotti, Davide, Angra, D., Xia, Xinxing, Tacke, R., Khazaei, H., Crocoll, C., Vandenberg, A., Link, W., Stoddard, F. L., O'Sullivan, D. M., Stougaard, J., Schulman, A. H., Andersen, S. U. & Geu-Flores, Fernando, 2021, In: Nature Plants. 7, p. 923–931

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Using networks to identify and interpret natural variation

    Kliebenstein, D. J., 2020, In: Current Opinion in Plant Biology. 54, p. 122-126 5 p.

    Research output: Contribution to journal › Review › Research › peer-review

  10. Published

    Uptake Assays in Xenopus laevis Oocytes Using Liquid Chromatography-mass Spectrometry to Detect Transport Activity

    Jørgensen, M., Crocoll, C., Halkier, Barbara Ann & Nour-Eldin, Hussam Hassan, 2017, In: Bio-protocol. 7, 20, 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Upon bolting the GTR1 and GTR2 transporters mediate transport of glucosinolates to the inflorescence rather than roots

    Andersen, T. G. & Halkier, Barbara Ann, 2014, In: Plant Signalling & Behavior. 9, 1, 2 p., e27740.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Unravelling the Transport Mechanism of NPF Transporters

    Wulff, N., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  13. Published

    Unravelling protein-protein interaction networks linked to aliphatic and indole glucosinolate biosynthetic pathways in arabidopsis

    Kjeldgaard-Nintemann, Sebastian J, Vik, D., Svozil, J., Bak, M., Baerenfaller, K., Burow, Meike & Halkier, Barbara Ann, 2017, In: Frontiers in Plant Science. 8, 20 p., 2028.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Unraveling incompatibility between wheat and the fungal pathogen Zymoseptoria tritici through apoplastic proteomics

    Yang, F., Li, W., Derbyshire, M., Larsen, M. R., Rudd, J. J. & Palmisano, G., 2015, In: B M C Genomics. 16, 12 p., 362.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Understanding the Biological Roles of Pectins in Plants through Physiological and Functional Characterizations of Plant and Fungal Mutants

    Stranne, M., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 233 p.

    Research output: Book/Report › Ph.D. thesis › Research

  16. Published

    Understanding CrRLK1L Function: Cell Walls and Growth Control

    Nissen, Karen Stoltenberg, Willats, W. G. T. & Malinovsky, F. G., 2016, In: Trends in Plant Science. 21, 6, p. 516-527 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Ultrastructural modeling of small angle scattering from photosynthetic membranes

    Jakubauskas, D., Kowalewska, Ł., Sokolova, A. V., Garvey, C. J., Mortensen, Kell, Jensen, Poul Erik & Kirkensgaard, Jacob Judas Kain, 1 Dec 2019, In: Scientific Reports. 9, 13 p., 19405.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    USER-derived cloning methods and their primer design

    Salomonsen, B., Mortensen, U. H. & Halkier, Barbara Ann, 2014, DNA cloning and assembly methods. Humana Press, p. 59-72 13 p. (Methods in Molecular Biology, Vol. 1116).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  19. Published

    Trichoderma harzianum Peptaibols Stimulate Plant Plasma Membrane H+-ATPase Activity

    Bjørk, Peter Klemmed, Johansen, Nicolai Tidemand, Havshøi, N. W., Rasmussen, S. A., Ipsen, J. Ø., Isbrandt, T., Larsen, T. O. & Fuglsang, Anja Thoe, 2023, In: ACS Omega. 8, 38, p. 34928-34937 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Transport of defense compounds from source to sink: lessons learned from glucosinolates

    Jørgensen, M. E., Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2015, In: Trends in Plant Science. 20, 8, p. 508-514 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Transport engineering in microbial cell factories producing plant-specialized metabolites

    Belew, Zeinu Mussa, Poborsky, Michal, Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2022, In: Current Opinion in Green and Sustainable Chemistry. 33, 100576.

    Research output: Contribution to journal › Review › Research › peer-review

  22. Published

    Transport Engineering in Synthetic Biology: Identification and characterization of phlorizin transporters enables increased production in yeast

    Belew, Zeinu Mussa, 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  23. Published

    Transforming yeast peroxisomes into microfactories for the efficient production of high-value isoprenoids

    hmq634, hmq634, Wajn, William Thomas, Liu, Y., Ignea, C. & Kampranis, Sotirios, 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 50, p. 31789-31799 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Transfer of the cytochrome P450-dependent dhurrin pathway from Sorghum bicolor into Nicotiana tabacum chloroplasts for light-driven synthesis

    Gnanasekaran, Thiyagarajan, Karcher, D., Nielsen, A. J. Z., Martens, Helle Jakobe, Ruf, S., Kroop, X., Olsen, C. E., Motawie, Mohammed Saddik, Pribil, Mathias, Møller, Birger Lindberg, Bock, R. & Jensen, Poul Erik, 2016, In: Journal of Experimental Botany. 67, 8, p. 2495-2506 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Transcriptome and metabolite changes during hydrogen cyanamide-induced floral bud break in sweet cherry

    Ionescu, I. A., Lopez-Ortega, G., Burow, Meike, Bayo-Canha, A., Junge, A., Gericke, Oliver, Møller, Birger Lindberg & Sánchez Pérez, R., 2017, In: Frontiers in Plant Science. 8, 17 p., 1233.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Transcriptional reprogramming of wheat and the hemibiotrophic pathogen Septoria tritici during two phases of the compatible interaction

    Yang, F., Li, W. & Jørgensen, Hans Jørgen Lyngs, 2013, In: P L o S One. 8, 11, 15 p., e81606.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Transcriptional regulation of nitrogen-associated metabolism and growth

    Gaudinier, A., Rodriguez-Medina, J., Zhang, L., Olson, A., Liseron-Monfils, C., Bågman, A. M., Foret, J., Abbitt, S., Tang, M., Li, B., Runcie, D. E., Kliebenstein, D. J., Shen, B., Frank, M. J., Ware, D. & Brady, S. M., 8 Nov 2018, In: Nature. 563, 7730, p. 259-264

    Research output: Contribution to journal › Letter › Research › peer-review

  28. Published

    Transcriptional read-through of the long non-coding RNA SVALKA governs plant cold acclimation

    Kindgren, P. R., Ard, R., Ivanov, M. & Marquardt, Sebastian, 2018, In: Nature Communications. 9, p. 1-11 4561.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Transcriptional networks governing plant metabolism

    Gaudinier, A., Tang, M. & Kliebenstein, D. J., 2015, In: Current Plant Biology. 3-4, p. 56-64 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Transcription-driven chromatin repression of Intragenic transcription start sites

    Nielsen, M., Ard, R., Leng, Xueyuan, Ivanov, M., Kindgren, P. R., Pelechano, V. & Marquardt, Sebastian, 1 Feb 2019, In: PLOS Genetics. 15, 2, p. 1-33 e1007969.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Transcript profiling of a bitter variety of narrow-leafed lupin to discover alkaloid biosynthetic genes

    Yang, T., Nagy, I., Mancinotti, Davide, Otterbach, S. L., Andersen, T. B., Motawie, Mohammed Saddik, Asp, T. & Geu-Flores, Fernando, 2017, In: Journal of Experimental Botany. 68, 20, p. 5527-5537 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Transcript isoform sequencing reveals widespread promoter-proximal transcriptional termination in Arabidopsis

    Thomas, Quentin, Ard, R., Liu, J., Li, B., Wang, J., Pelechano, V. & Marquardt, Sebastian, 2020, In: Nature Communications. 11, 1, p. 1-15

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    TrancriptomeReconstructoR: data-driven annotation of complex transcriptomes

    Ivanov, M., Sandelin, Albin Gustav & Marquardt, Sebastian, 2021, In: BMC Bioinformatics. 22, 15 p., 290.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Tracking developmentally regulated post-synthetic processing of homogalacturonan and chitin using reciprocal oligosaccharide probes

    Mravec, Jozef, Kracun, S. K., Rydahl, M. G., Westereng, B., Miart, F., Clausen, M. H., Fangel, J. U., Daugaard, M., Van Cutsem, P., de Fine Licht, Henrik Hjarvard, Höfte, H., Malinovsky, F. G., Domozych, D. S. & Willats, W. G. T., 2014, In: Development. 141, p. 4841-4850 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Towards understanding the evolution and functional diversification of DNA-containing plant organelles: [version 1; referees: 3 approved]

    Leister, D. M., 2016, In: F1000Research. 5, 330.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Tomato fruit carotenoid biosynthesis is adjusted to actual ripening progression by a light-dependent mechanism

    Llorente, B., D'Andrea, L., Aguila Ruiz-Sola, M., Botterweg Paredes, E., Pulido, P., Andilla, J., Loza-Alvarez, P. & Rodriguez-Concepcion, M., 2016, In: Plant Journal. 85, 1, p. 107-119 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Tissue-specific gene-expression patterns of genes associated with thymol/carvacrol biosynthesis in thyme (Thymus vulgaris L.) and their differential changes upon treatment with abiotic elicitors

    Majdi, M., Malekzadeh-Mashhady, A., Maroufi, A. & Crocoll, C., 2017, In: Plant Physiology and Biochemistry. 115, p. 152-162 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Thermal unfolding and refolding of a lytic polysaccharide monooxygenase from Thermoascus aurantiacus

    Singh, R. K., Blossom, B. M., Russo, D. A., van Oort, B., Croce, R., Jensen, P. E., Felby, C. & Bjerrum, Morten Jannik, 2019, In: R S C Advances. 9, 9 p., 29734.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    The γ-hydroxybutyric acid (GHB) analogue NCS-382 is a substrate for both monocarboxylate transporters subtypes 1 and 4

    Thiesen, L., Belew, Zeinu Mussa, Griem-Krey, Nane, Pedersen, Stine Helene Falsig, Crocoll, C., Nour-Eldin, Hussam Hassan & Wellendorph, Petrine, 15 Feb 2020, In: European Journal of Pharmaceutical Sciences. 143, p. 1-9 105203.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    The two Dps proteins, NpDps2 and NpDps5, are involved in light-induced oxidative stress tolerance in the N2-fixing cyanobacterium Nostoc punctiforme

    Moparthi, V. K., Li, X., Vavitsas, K., Dzhygyr, I., Sandh, G., Magnuson, A. & Stensjö, K., 2016, In: Biochimica et Biophysica Acta (BBA) - Bioenergetics. 1857, 11, p. 1766-1776 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    The synergy between LPMOs and cellulases in enzymatic saccharification of cellulose is both enzyme- and substrate-dependent

    Tokin, Radina, Ipsen, J. Ø., Westh, P. & Johansen, Katja Salomon, 1 Oct 2020, In: Biotechnology Letters. 42, 10, p. 1975-1984 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    The role of the cell wall in plant immunity

    Malinovsky, F. G., Fangel, J. U. & Willats, W. G. T., 2014, In: Frontiers in Plant Science. 5, 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    The role of cysteine residues in redox regulation and protein stability of Arabidopsis thaliana starch synthase 1

    Skryhan, K., Cuesta-Seijo, J. A., Nielsen, M. M., Marri, L., Mellor, Silas Busck, Glaring, M. A., Jensen, Poul Erik, Palcic, M. M. & Blennow, Andreas, 2015, In: PLOS ONE. 10, 9, p. e0136997

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    The quantitative basis of the Arabidopsis innate immune system to endemic pathogens depends on pathogen genetics

    Corwin, J. A., Copeland, D., Feusier, J., Subedy, A., Eshbaugh, R., Palmer, C., Maloof, J. & Kliebenstein, D. J., 2016, In: P L o S Genetics. 12, 2, 29 p., e1005789.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    The primary sequence of cytochrome P-450TYR, the multifunctional N-hydroxylase catalyzing the conversion of L-tyrosine to p-hydroxyphenylacetaldehyde oxime in the biosynthesis of the cyanogenic glucoside dhurrin in Sorghum bicolor (L.) Moench

    Koch, B. M., Sibbesen, O., Halkier, Barbara Ann, Svendsen, I. & Møller, Birger Lindberg, 20 Oct 1995, In: Archives of Biochemistry and Biophysics. 323, 1, p. 177-186 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    The organization of the Fe-S acceptors of photosystem I

    Møller, Birger Lindberg, Halkier, Barbara Ann & Høj, P. B., 1986, Progress in Photosynthesis Research. Biggins, J. (ed.). 1 ed. Vol. II. p. 53-56 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  47. Published

    The non-coding RNA Ncr0700/PmgR1 is required for photomixotrophic growth and the regulation of glycogen accumulation in the cyanobacterium Synechocystis sp. PCC 6803

    de Porcellinis, A. J., Klähn, S., Rosgaard, L., Kirsch, R., Gutekunst, K., Georg, J., Hess, W. R. & Sakuragi, Y., 2016, In: Plant and Cell Physiology. 57, 10, p. 2091-2103 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    The next step in microbial production of plant natural compounds - pathway optimization and stable integration

    Crocoll, C., Petersen, A. & Halkier, Barbara Ann, 2016, In: Planta Medica. 82, S 01, 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  49. Published

    The low molecular weight protein PsaI stabilizes the light-harvesting complex II docking site of photosystem I

    Plöchinger, M., Torabi, S., Rantala, M., Tikkanen, M., Suorsa, M., Jensen, Poul Erik, Aro, E. M. & Meurer, J., 2016, In: Plant Physiology. 172, 1, p. 450-463 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    The involvement of cytochrome P450 in the biosynthesis of cyanogenic glucosides

    Halkier, Barbara Ann, Scheller, H. V. & Møller, Birger Lindberg, 1989, Cytochrome P-450: Biochemistry and Biophysics. Schuster, I. (ed.). Taylor & Francis, p. 154-157 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  51. Published

    The intracellular localization of the vanillin biosynthetic machinery in pods of Vanilla planifolia

    Gallage, N. J., Jørgensen, Kirsten, Janfelt, Christian, Nielsen, A. J. Z., Naake, T., Dunski, E., Dalsten, L., Grisoni, M. & Møller, Birger Lindberg, 2018, In: Plant and Cell Physiology. 59, 2, p. 304-318 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    The ins and outs of transporters at plasma membrane and tonoplast in plant specialized metabolism: [Correction]

    Xu, Deyang & Halkier, Barbara Ann, 2022, In: Natural Product Reports. 39, 7, p. 1483-1491

    Research output: Contribution to journal › Review › Research › peer-review

  53. Published

    The impacts of phosphorus deficiency on the photosynthetic electron transport chain

    Carstensen, A., Herdean, A., Schmidt, Sidsel Birkelund, Sharma, A., Spetea, C., Pribil, Mathias & Husted, Søren, 2018, In: Plant Physiology. 177, p. 271-284 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    The glucosinolate biosynthetic gene AOP2 mediates feed-back regulation of jasmonic acid signaling in Arabidopsis

    Burow, Meike, Atwell, S., Francisco, M., Kerwin, R. E., Halkier, Barbara Ann & Kliebenstein, D. J., 2015, In: Molecular Plant. 8, 8, p. 1201-1212 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    The evolutionarily conserved protein PHOTOSYNTHESIS AFFECTED MUTANT71 is required for efficient manganese uptake at the thylakoid membrane in Arabidopsis

    Schneider, A., Steinberger, I., Herdean, A., Gandini, C., Eisenhut, M., Kurz, S., Morper, A., Hoecker, N., Rühle, T., Labs, M., Flügge, U. I., Geimer, S., Schmidt, Sidsel Birkelund, Husted, Søren, Weber, A. P. M., Spetea, C. & Leister, D. M., 2016, In: Plant Cell. 28, 4, p. 892-910 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    The emerging role of the nitrate and peptide transporter family: NPF in plant specialized metabolism

    Kanstrup, Christa & Nour-Eldin, Hussam Hassan, 2022, In: Current Opinion in Plant Biology. 68, 10 p., 102243.

    Research output: Contribution to journal › Review › Research › peer-review

  57. Published

    The emerging field of transport engineering of plant specialized metabolites

    Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2013, In: Current Opinion in Biotechnology. 24, 2, p. 263-270 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    The effect of modulating the quantity of enzymes in a model ethanol pathway on metabolic flux in Synechocystis sp. PCC 6803

    Bartasun, P., Prandi, N., Storch, M., Aknin, Y., Bennett, M., Palma, A., Baldwin, G., Sakuragi, Y., Jones, P. R. & Rowland, J., 2019, In: PeerJ. 2019, 7, p. 1-18 7529.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    The ease and complexity of identifying and using specialized metabolites for crop engineering

    Muhich, A. J., Agosto-Ramos, A. & Kliebenstein, D. J., 2022, In: Emerging topics in life sciences. 6, p. 153-162 10 p.

    Research output: Contribution to journal › Review › Research › peer-review

  60. Published

    The defense metabolite, allyl glucosinolate, modulates Arabidopsis thaliana biomass dependent upon the endogenous glucosinolate pathway

    Francisco, M., Joseph, B., Caligagan, H., Li, B., Corwin, J. A., Lin, C., Kerwin, R., Burow, Meike & Kliebenstein, D. J., 2016, In: Frontiers in Plant Science. 7, 14 p., 774.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    The decision to germinate is regulated by divergent molecular networks in spores and seeds

    Vesty, E. F., Saidi, Y., Moody, L. A., Holloway, D., Whitbread, A., Needs, S., Choudhary, A., Burns, B., McLeod, D., Bradshaw, S. J., Bae, H., King, B. C., Bassel, G. W., Simonsen, H. T. & Coates, J. C., 2016, In: New Phytologist. 211, 3, p. 952-966 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    The cytochrome P450 CYP72A552 is key to production of hederagenin‐based saponins that mediate plant defense against herbivores

    Liu, Q., Khakimov, Bekzod, Cárdenas, Pablo D., Cozzi, F., Olsen, C. E., Jensen, Karen Rysbjerg, Hauser, T. P. & Bak, Søren, May 2019, In: New Phytologist (Online). 222, 3, p. 1599-1609

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    The conserved transcription factors, MYB115 and MYB118, control expression of the newly evolved benzoyloxy glucosinolate pathway in Arabidopsis thaliana

    Zhang, Y., Li, B., Huai, D., Zhou, Y. & Kliebenstein, D. J., 2015, In: Frontiers in Plant Science. 6, 19 p., 343.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    The calcium-dependent protein kinase CPK28 buffers plant immunity and regulates BIK1 turnover

    Monaghan, J., Matschi, S., Shorinola, O., Rovenich, H., Matei, A., Segonzac, C., Malinovsky, F. G., Rathjen, J. P., MacLean, D., Romeis, T. & Zipfel, C., 2014, In: Cell Host & Microbe. 16, 5, p. 605-615 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    The biosynthetic gene cluster for the cyanogenic glucoside dhurrin in Sorghum bicolor contains its co-expressed vacuolar MATE transporter

    Darbani Shirvanehdeh, B., Motawie, Mohammed Saddik, Olsen, C. E., Nour-Eldin, Hussam Hassan, Møller, Birger Lindberg & Rook, F., 2016, In: Scientific Reports. 6, 8 p., 37079.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    The biosynthesis of thymol, carvacrol, and thymohydroquinone in Lamiaceae proceeds via cytochrome P450s and a short-chain dehydrogenase

    Krause, S. T., Liao, P., Crocoll, C., Boachon, B., Foerster, C., Leidecker, F., Wiese, N., Zhao, D., Wood, J. C., Buell, C. R., Gershenzon, J., Dudareva, N. & Degenhardt, J., 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 52, 10 p., e2110092118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    The biosynthesis of cyanogenic glucosides in roots of cassava

    Du, L., Bokanga, M., Møller, Birger Lindberg & Halkier, Barbara Ann, May 1995, In: Phytochemistry. 39, 2, p. 323-326 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    The biosynthesis of cyanogenic glucosides in higher plants: Identification of 3 hydroxylation steps in the biosynthesis of dhurrin in Sorghum bicolor (L.) Moench and the involvement of 1-aci-nitro-2-(p-hydroxyphenyl)ethane as an intermediate

    Halkier, Barbara Ann & Møller, Birger Lindberg, 5 Dec 1990, In: Journal of Biological Chemistry. 265, 34, p. 21114-21121

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    The biosynthesis of cyanogenic glucosides in higher plants. The (E)- and (Z)-isomers of p-hydroxyphenylacetaldehyde oxime as intermediates in the biosynthesis of dhurrin in Sorghum bicolor (L.)

    Halkier, Barbara Ann, Olsen, C. E. & Møller, Birger Lindberg, 1989, In: The Journal of Biological Chemistry. 264, 33, p. 19487-19494

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    The biological function and regulation of non-coding transcription originating from bi-directional promoters

    du Mee, D. J. M., 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 170 p.

    Research output: Book/Report › Ph.D. thesis › Research

  71. Published

    The bHLH transcription factor ILR3 modulates multiple stress responses in Arabidopsis

    Samira, R., Li, B., Kliebenstein, D. J., Li, C., Davis, E., Gillikin, J. W. & Long, T. A., 2018, In: Plant Molecular Biology. 97, 4-5, p. 297-309 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    The antimycin A-sensitive pathway of cyclic electron flow: from 1963 to 2015

    Labs, M., Rühle, T. & Leister, D. M., 2016, In: Photosynthesis Research. 129, 3, p. 231-238 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    The aerial epidermis is a major site of quinolizidine alkaloid biosynthesis in narrow-leafed lupin

    Frick, Karen Michiko, Lorensen, Marcus Daniel B B, Esteban, E., Pasha, A., Schulz, Alexander, Provart, N. J., Janfelt, Christian, Nour-Eldin, Hussam Hassan & Geu-Flores, Fernando, 2023, bioRxiv, 18 p.

    Research output: Working paper › Preprint › Research

  74. Published

    The Spatial Organization of Glucosinolate Biosynthesis: Localization of Biosynthetic Enzymes from the Whole Plant to the Subcellular Level

    Kjeldgaard-Nintemann, Sebastian J, 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 143 p.

    Research output: Book/Report › Ph.D. thesis › Research

  75. Published

    The Roles of Transcription Speed and Transcriptional Interference in Plant Gene Expression

    Leng, Xueyuan, 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  76. Published

    The Role of the Glucosinolate-Myrosinase System in Mediating Greater Resistance of Barbarea verna than B. vulgaris to Mamestra brassicae Larvae

    Mueller, C., Schulz, M., Pagnotta, E., Ugolini, L., Yang, T., Matthes, A., Lazzeri, L. & Agerbirk, Niels, 2018, In: Journal of Chemical Ecology. 44, 12, p. 1190-1205

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    The Role of Phosphorylation Dynamics of CURVATURE THYLAKOID 1B in Plant Thylakoid Membranes

    Trotta, A., Bajwa, A. A., Mancini, I., Paakkarinen, V., Pribil, Mathias & Aro, E. M., Dec 2019, In: Plant Physiology. 181, 4, p. 1615-1631

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    The Role of Pectin Acetylation in the Organization of Plant Cell Walls

    Fimognari, L., 2016, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  79. Published

    The P5A ATPase Spf1p is stimulated by phosphatidylinositol 4-phosphate and influences cellular sterol homeostasis

    Sørensen, D. M., Holen, H. W., Pedersen, J. T., Martens, Helle Jakobe, Silvestro, D., Stanchev, L. D., Costa, S. R., Pomorski, Thomas Guenther, Lopez Marques, Rosa Laura & Palmgren, Michael, 15 Apr 2019, In: Molecular Biology of the Cell. 30, 9, p. 1069-1084

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    The Journey of a Transcription Factor: MYB Transcription Factor Interactions Regulating the Glucosinolate Metabolic Network in Arabidopsis

    Pireyre, M., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 247 p.

    Research output: Book/Report › Ph.D. thesis › Research

  81. Published

    The Hda1 histone deacetylase limits divergent non-coding transcription and restricts transcription initiation frequency

    Gowthaman, U., Ivanov, M., Schwarz, Isabel Aimèe, Patel, H. P., Müller, N. A., Garcia Pichardo, Desire, Lenstra, T. L. & Marquardt, Sebastian, 2021, In: EMBO Journal. 40, 23, 16 p., 108903.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    The GORKY glycoalkaloid transporter is indispensable for preventing tomato bitterness

    Kazachkova, Y., Zemach, I., Panda, S., Bocobza, S., Vainer, A., Rogachev, I., Dong, Y., Ben-Dor, S., Veres, D., Kanstrup, Christa, Lambertz, S. K., Crocoll, C., Hu, Y., Shani, E., Michaeli, S., Nour-Eldin, Hussam Hassan, Zamir, D. & Aharoni, A., 2021, In: Nature Plants. 7, p. 468-480

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    The Endo-Arabinanase BcAra1 Is a Novel Host-Specific Virulence Factor of the Necrotic Fungal Phytopathogen Botrytis cinerea

    Nafisi, M., Stranne, M., Zhang, L., van Kan, J. A. L. & Sakuragi, Y., 1 Aug 2014, In: Molecular Plant - Microbe Interactions. 27, 8, p. 781-792 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    The Circadian Clock Gene Circuit Controls Protein and Phosphoprotein Rhythms in Arabidopsis thaliana

    Krahmer, J., Hindle, M., Perby, L. K., Mogensen, Helle Kildal, Nielsen, T. H., Halliday, K. J., van Ooijen, G., Le Bihan, T. & Millar, A. J., 2022, In: Molecular and Cellular Proteomics. 21, 1, 20 p., 100172.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    The Chloroplast Talks - Insights into the language of the chloroplast in Arabidopsis

    Kindgren, P. R., Oct 2010

    Research output: Book/Report › Ph.D. thesis › Research

  86. Published

    The Biosynthesis of Cyanogenic Glucosides in Seedlings of Cassava (Manihot esculenta Crantz)

    Koch, B., Nielsen, V. S., Halkier, Barbara Ann, Olsen, C. E. & Møller, Birger Lindberg, Jan 1992, In: Archives of Biochemistry and Biophysics. 292, 1, p. 141-150 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    The AreA transcription factor in Fusarium graminearum regulates the use of some nonpreferred nitrogen sources and secondary metabolite production

    Giese, N. H., Sondergaard, T. E. & Sorensen, J. L., 1 Nov 2013, In: Fungal Biology. 117, 11-12, p. 814-821 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    The Arabidopsis NPF3 protein is a GA transporter

    Tal, I., Zhang, Y., Jørgensen, M. E., Pisanty, O., Barbosa, I. C. R., Zourelidou, M., Regnault, T., Crocoll, C., Olsen, C. E., Weinstain, R., Schwechheimer, C., Halkier, Barbara Ann, Nour-Eldin, Hussam Hassan, Estelle, M. & Shani, E., 2016, In: Nature Communications. 7, 20 p., 11486.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Tenuazonic acid from Stemphylium loti inhibits the plant plasma membrane H+‐ATPase by a mechanism involving the C‐terminal regulatory domain

    Bjørk, Peter Klemmed, Rasmussen, S. A., Gjetting, S. K., Havshøi, N. W., Petersen, T. I., Ipsen, J. Ø., Larsen, T. O. & Fuglsang, Anja Thoe, 2020, In: New Phytologist. 226, 3, p. 770-784

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Tat proteins as novel thylakoid membrane anchors organize a biosynthetic pathway in chloroplasts and increase product yield 5-fold

    Henriques de Jesus, M. P. R., Nielsen, A. J. Z., Mellor, Silas Busck, Matthes, A., Burow, Meike, Robinson, C. & Jensen, Poul Erik, 2017, In: Metabolic Engineering. 44, p. 108-116 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    THU-491-The role of alanine glyoxylate aminotransferase in hepatocellular carcinoma

    Satriano, L., Lewinska, Monika, Rourke, C. O., Oliveira, D. V., Bhatt, D. K., Taranta, A., Herr, M., Straub, B., Conner, D. E. A., Budhu, D. A., Pomyen, Y., Ma, Tao, Gerhart-Hines, Zach, Stjernegaard, D. C. S., Matter, M., Crocoll, D. C., Wang, X. W., Marquardt, J. & Andersen, Jesper Bøje, 2019, p. e377.

    Research output: Contribution to conference › Poster › Research

  92. Published

    TGF-β Signaling Is Associated with Endocytosis at the Pocket Region of the Primary Cilium

    Clement, C. A., Ajbro, K. D., Koefoed, K., Vestergaard, M. L., Veland, I. R., Perestrello Ramos H de Jesus, M., Pedersen, Lotte Bang, Benmerah, A., tcg964, tcg964, Larsen, Lars Allan & Christensen, Søren Tvorup, 2013, In: Cell Reports. 3, 6, p. 1806-1814 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    Systematic engineering pinpoints a versatile strategy for the expression of functional cytochrome P450 enzymes in Escherichia coli cell factories

    Poborsky, Michal, Crocoll, C., Motawie, Mohammed Saddik & Halkier, Barbara Ann, 2023, In: Microbial Cell Factories. 22, 10 p., 219.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Synthetic biology of cyanobacteria for production of biofuels and high-value products

    Klemenčič, M., Nielsen, A. Z., Sakuragi, Y., Frigaard, Niels-Ulrik, Čelešnik, H., Jensen, Poul Erik & Dolinar, M., 2017, Microalgae-Based Biofuels and Bioproducts: From Feedstock Cultivation to End-Products. Gonzalez-Fernandez, C. & Muñoz, R. (eds.). Duxford, UK: Elsevier Science Inc., p. 305-325 21 p. (Woodhead Publishing Series in Energy).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  95. Published

    Synthetic Protein Scaffolding at Biological Membranes

    Behrendorff, J. B. Y. H., Borràs I Gas, G. & Pribil, Mathias, 2020, In: Trends in Biotechnology. 38, 4, p. 432-446

    Research output: Contribution to journal › Review › Research › peer-review

  96. Published

    Synthetic Biology with Cytochromes P450 Using Photosynthetic Chassis

    Gnanasekaran, Thiyagarajan, 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 135 p.

    Research output: Book/Report › Ph.D. thesis › Research

  97. Published

    Synthetic Biology of Cannabinoids and Cannabinoid Glucosides in Nicotiana benthamiana and Saccharomyces cerevisiae

    Gülck, T., Booth, J. K., Carvalho, Â., Khakimov, Bekzod, Crocoll, C., Motawie, Mohammed Saddik, Møller, Birger Lindberg, Bohlmann, J. & Gallage, N. J., 2020, In: Journal of Natural Products. 83, 10, p. 2877-2893 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Synthetic Biology of Chlamydomonas reinhardtii: Robust molecular tools for new bioengineering chassis

    Bakowski, K., 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  99. Published

    Sulfur metabolism in Allium cepa is hardly affected by chloride and sulfate salinity

    Aghajanzadeh, T. A., Reich, M., Hawkesford, M. J. & Burow, Meike, 2019, In: Archives of Agronomy and Soil Science. 65, 7, p. 945-956

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Sugar transporters enable a leaf beetle to accumulate plant defense compounds

    Yang, Z. L., Nour-Eldin, Hussam Hassan, Hänniger, S., Reichelt, M., Crocoll, C., Seitz, F., Vogel, H. & Beran, F., 2021, In: Nature Communications. 12, 1, 12 p., 2658.

    Research output: Contribution to journal › Journal article › Research › peer-review

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