Section for Molecular Plant Biology

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  1. Published

    Transcriptional reprogramming of wheat and the hemibiotrophic pathogen Septoria tritici during two phases of the compatible interaction

    Yang, F., Li, W. & Jørgensen, Hans Jørgen Lyngs, 2013, In: P L o S One. 8, 11, 15 p., e81606.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Transcriptional regulation of nitrogen-associated metabolism and growth

    Gaudinier, A., Rodriguez-Medina, J., Zhang, L., Olson, A., Liseron-Monfils, C., Bågman, A. M., Foret, J., Abbitt, S., Tang, M., Li, B., Runcie, D. E., Kliebenstein, D. J., Shen, B., Frank, M. J., Ware, D. & Brady, S. M., 8 Nov 2018, In: Nature. 563, 7730, p. 259-264

    Research output: Contribution to journal › Letter › Research › peer-review

  3. Published

    Transcriptional read-through of the long non-coding RNA SVALKA governs plant cold acclimation

    Kindgren, P. R., Ard, R., Ivanov, M. & Marquardt, Sebastian, 2018, In: Nature Communications. 9, p. 1-11 4561.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Transcriptional networks governing plant metabolism

    Gaudinier, A., Tang, M. & Kliebenstein, D. J., 2015, In: Current Plant Biology. 3-4, p. 56-64 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Transcription-driven chromatin repression of Intragenic transcription start sites

    Nielsen, M., Ard, R., Leng, Xueyuan, Ivanov, M., Kindgren, P. R., Pelechano, V. & Marquardt, Sebastian, 1 Feb 2019, In: PLOS Genetics. 15, 2, p. 1-33 e1007969.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Transcript profiling of a bitter variety of narrow-leafed lupin to discover alkaloid biosynthetic genes

    Yang, T., Nagy, I., Mancinotti, Davide, Otterbach, S. L., Andersen, T. B., Motawie, Mohammed Saddik, Asp, T. & Geu-Flores, Fernando, 2017, In: Journal of Experimental Botany. 68, 20, p. 5527-5537 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Transcript isoform sequencing reveals widespread promoter-proximal transcriptional termination in Arabidopsis

    Thomas, Quentin, Ard, R., Liu, J., Li, B., Wang, J., Pelechano, V. & Marquardt, Sebastian, 2020, In: Nature Communications. 11, 1, p. 1-15

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    TrancriptomeReconstructoR: data-driven annotation of complex transcriptomes

    Ivanov, M., Sandelin, Albin Gustav & Marquardt, Sebastian, 2021, In: BMC Bioinformatics. 22, 15 p., 290.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Tracking developmentally regulated post-synthetic processing of homogalacturonan and chitin using reciprocal oligosaccharide probes

    Mravec, Jozef, Kracun, S. K., Rydahl, M. G., Westereng, B., Miart, F., Clausen, M. H., Fangel, J. U., Daugaard, M., Van Cutsem, P., de Fine Licht, Henrik Hjarvard, Höfte, H., Malinovsky, F. G., Domozych, D. S. & Willats, W. G. T., 2014, In: Development. 141, p. 4841-4850 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Towards understanding the evolution and functional diversification of DNA-containing plant organelles: [version 1; referees: 3 approved]

    Leister, D. M., 2016, In: F1000Research. 5, 330.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Tomato fruit carotenoid biosynthesis is adjusted to actual ripening progression by a light-dependent mechanism

    Llorente, B., D'Andrea, L., Aguila Ruiz-Sola, M., Botterweg Paredes, E., Pulido, P., Andilla, J., Loza-Alvarez, P. & Rodriguez-Concepcion, M., 2016, In: Plant Journal. 85, 1, p. 107-119 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Tissue-specific gene-expression patterns of genes associated with thymol/carvacrol biosynthesis in thyme (Thymus vulgaris L.) and their differential changes upon treatment with abiotic elicitors

    Majdi, M., Malekzadeh-Mashhady, A., Maroufi, A. & Crocoll, C., 2017, In: Plant Physiology and Biochemistry. 115, p. 152-162 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Thermal unfolding and refolding of a lytic polysaccharide monooxygenase from Thermoascus aurantiacus

    Singh, R. K., Blossom, B. M., Russo, D. A., van Oort, B., Croce, R., Jensen, P. E., Felby, C. & Bjerrum, Morten Jannik, 2019, In: R S C Advances. 9, 9 p., 29734.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    The γ-hydroxybutyric acid (GHB) analogue NCS-382 is a substrate for both monocarboxylate transporters subtypes 1 and 4

    Thiesen, L., Belew, Zeinu Mussa, Griem-Krey, Nane, Pedersen, Stine Helene Falsig, Crocoll, C., Nour-Eldin, Hussam Hassan & Wellendorph, Petrine, 15 Feb 2020, In: European Journal of Pharmaceutical Sciences. 143, p. 1-9 105203.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    The two Dps proteins, NpDps2 and NpDps5, are involved in light-induced oxidative stress tolerance in the N2-fixing cyanobacterium Nostoc punctiforme

    Moparthi, V. K., Li, X., Vavitsas, K., Dzhygyr, I., Sandh, G., Magnuson, A. & Stensjö, K., 2016, In: Biochimica et Biophysica Acta (BBA) - Bioenergetics. 1857, 11, p. 1766-1776 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    The synergy between LPMOs and cellulases in enzymatic saccharification of cellulose is both enzyme- and substrate-dependent

    Tokin, Radina, Ipsen, J. Ø., Westh, P. & Johansen, Katja Salomon, 1 Oct 2020, In: Biotechnology Letters. 42, 10, p. 1975-1984 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    The role of the cell wall in plant immunity

    Malinovsky, F. G., Fangel, J. U. & Willats, W. G. T., 2014, In: Frontiers in Plant Science. 5, 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    The role of cysteine residues in redox regulation and protein stability of Arabidopsis thaliana starch synthase 1

    Skryhan, K., Cuesta-Seijo, J. A., Nielsen, M. M., Marri, L., Mellor, Silas Busck, Glaring, M. A., Jensen, Poul Erik, Palcic, M. M. & Blennow, Andreas, 2015, In: PLOS ONE. 10, 9, p. e0136997

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    The quantitative basis of the Arabidopsis innate immune system to endemic pathogens depends on pathogen genetics

    Corwin, J. A., Copeland, D., Feusier, J., Subedy, A., Eshbaugh, R., Palmer, C., Maloof, J. & Kliebenstein, D. J., 2016, In: P L o S Genetics. 12, 2, 29 p., e1005789.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    The primary sequence of cytochrome P-450TYR, the multifunctional N-hydroxylase catalyzing the conversion of L-tyrosine to p-hydroxyphenylacetaldehyde oxime in the biosynthesis of the cyanogenic glucoside dhurrin in Sorghum bicolor (L.) Moench

    Koch, B. M., Sibbesen, O., Halkier, Barbara Ann, Svendsen, I. & Møller, Birger Lindberg, 20 Oct 1995, In: Archives of Biochemistry and Biophysics. 323, 1, p. 177-186 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    The organization of the Fe-S acceptors of photosystem I

    Møller, Birger Lindberg, Halkier, Barbara Ann & Høj, P. B., 1986, Progress in Photosynthesis Research. Biggins, J. (ed.). 1 ed. Vol. II. p. 53-56 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  22. Published

    The non-coding RNA Ncr0700/PmgR1 is required for photomixotrophic growth and the regulation of glycogen accumulation in the cyanobacterium Synechocystis sp. PCC 6803

    de Porcellinis, A. J., Klähn, S., Rosgaard, L., Kirsch, R., Gutekunst, K., Georg, J., Hess, W. R. & Sakuragi, Y., 2016, In: Plant and Cell Physiology. 57, 10, p. 2091-2103 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    The next step in microbial production of plant natural compounds - pathway optimization and stable integration

    Crocoll, C., Petersen, A. & Halkier, Barbara Ann, 2016, In: Planta Medica. 82, S 01, 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  24. Published

    The low molecular weight protein PsaI stabilizes the light-harvesting complex II docking site of photosystem I

    Plöchinger, M., Torabi, S., Rantala, M., Tikkanen, M., Suorsa, M., Jensen, Poul Erik, Aro, E. M. & Meurer, J., 2016, In: Plant Physiology. 172, 1, p. 450-463 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    The involvement of cytochrome P450 in the biosynthesis of cyanogenic glucosides

    Halkier, Barbara Ann, Scheller, H. V. & Møller, Birger Lindberg, 1989, Cytochrome P-450: Biochemistry and Biophysics. Schuster, I. (ed.). Taylor & Francis, p. 154-157 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

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