Section for Plant and Soil Sciences

  1. 2014
  2. Published

    Quantification of amylose, amylopectin and β-glucan in the search for genes controlling the three major quality traits in barley using genome-wide association studies

    Shu, X. & Rasmussen, S. K., 2014, In: Frontiers in Plant Science. 5, 12 p., 197.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Small-scale household biogas digesters: an option for global warming mitigation or a potential climate bomb?

    Bruun, Sander, Jensen, Lars Stoumann, Khanh Vu, V. T. & Sommer, S. G., 2014, In: Renewable & Sustainable Energy Reviews. 33, p. 736-741 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Spatial oxygen distribution and nitrous oxide emissions from soil after manure application: a novel approach using planar optodes

    Zhu, K., Bruun, Sander, Larsen, M., Glud, R. N. & Jensen, Lars Stoumann, 2014, In: Journal of Environmental Quality. 43, 5, p. 1809-1812 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Structure and enzymatic accessibility of leaf and stem from wheat straw before and after hydrothermal pretreatment

    Zhang, H., Thygesen, Lisbeth Garbrecht, Mortensen, Kell, Kádár, Z., Lindedam, J., Jørgensen, H. & Felby, C., 2014, In: Biotechnology for Biofuels. 7, 11 p., 74.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    The Effects of Management Practices on Soil Organic Carbon Stocks in Oil Palm Plantation

    Niharika Rahman, Jakob Magid, Andreas de Neergaard, Ken Giller, Thilde Bech Bruun, N. R. J. M. A. D. N. K. G. T. B. B., 2014.

    Research output: Contribution to conferencePosterResearch

  7. Published

    The different effects of applying fresh, composted or charred manure on soil N2O emissions

    Zhu, K., Christel, W., Bruun, Sander & Jensen, Lars Stoumann, 2014, In: Soil Biology & Biochemistry. 74, p. 61-69 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    The slippery slope of cisgenesis

    Eriksson, U. D., Stymne, S. & Schjoerring, Jan K., 2014, In: Nature Biotechnology. 32, 1 p., 727.

    Research output: Contribution to journalComment/debateResearchpeer-review

  9. Published

    Trans-kingdom cross-talk: small RNAs on the move

    Knip, M., Constantin, M. & Thordal-Christensen, Hans, 2014, In: PLoS Genetics. 10, 9, 7 p., e1004602.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Update on the genomics and basic biology of Brachypodium: International Brachypodium Initiative (IBI)

    Catalan, P., Chalhoub, B., Chochois, V., Garvin, D. F., Hasterok, R., Manzaneda, A. J., Mur, L. A. J., Pecchioni, N., Rasmussen, S. K., Vogel, J. P. & Voxeur, A., 2014, In: Trends in Plant Science. 19, 7, p. 414-418 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Upgrading of the Solid Fraction of Pig Slurry as Phosphorus Fertilizer: The Impact of Biological and Thermal Processing on P Availability

    Christel, W., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 185 p.

    Research output: Book/ReportPh.D. thesisResearch

  12. Published

    Using tube rhizotrons to measure variation in depth penetration rate among modern North-European winter wheat (Triticum aestivum L.) cultivars

    Ytting, N. K., Andersen, S. B. & Thorup-Kristensen, Kristian, 2014, In: Euphytica. 199, 1-2, p. 233-245 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. 2013
  14. Published

    Reduced Wall Acetylation Proteins Play Vital and Distinct Roles in Cell Wall O-Acetylation in Arabidopsis

    Manabe, Y., Verhertbruggen, Y., Gille, S., Harholt, J., Chong, S., Pawar, P. M., Mellerowicz, E. J., Tenkanen, M., Cheng, K., Pauly, M. & Scheller, H. V., 1 Nov 2013, In: Plant Physiology. 163, 3, p. 1107-1117 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Common bunt resistant wheat composite cross populations

    Steffan, P. M., Borgen, A., Backes, G. M. & Rasmussen, S. K., 21 Jan 2013. 1 p.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  16. Published

    Viden tur-retur via stipendiater

    Koch, N. E., Broberg, Morten, Fihl, Esther, Jensen, Stig Eduard Breitenstein, de Neergaard, Andreas & Tarp, Finn, 10 Jan 2013, In: Jyllands-Posten. p. 25-25 1 p.

    Research output: Contribution to journalContribution to newspaper - Feature articleCommunication

  17. Published

    A component of the Sec61 ER protein transporting pore is required for plant susceptibility to powdery mildew

    Zhang, W., Hanisch, S., Kwaaitaal, M. A. C. J., Pedersen, Carsten & Thordal-Christensen, Hans, 2013, In: Frontiers in Plant Science. 4, 8 p., 127.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    A proteomics approach to investigate the process of Zn hyperaccumulation in Noccaea caerulescens (J & C. Presl) F.K. Meyer

    Schneider, T., Persson, Daniel Pergament, Husted, Søren, Schellenberg, M., Gehrig, P., Lee, Y., Martinoia, E., Schjoerring, Jan K. & Meyer, S., 2013, In: The Plant Journal. 73, 1, p. 131-142 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    A survey of SHI transcription factors across plant species and their application in horticulture

    Topp, S. H. & Rasmussen, S. K., 2013, In: Acta Horticulturae. 974, p. 149-156 7 p.

    Research output: Contribution to journalConference articleResearchpeer-review

  20. Published

    Alternate partial root-zone irrigation improves fertilizer-N use efficiency in tomatoes

    Wang, Y., Liu, Fulai, Jensen, Lars Stoumann, de Neergaard, Andreas & Jensen, C. R., 2013, In: Irrigation Science. 31, 4, p. 589-598 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    An Optimized Calibration Procedure for Determining Elemental Ratios Using Laser-Induced Breakdown Spectroscopy

    Frydenvang, Jens, Kinch, Kjartan Münster, Husted, Søren & Madsen, Morten Bo, 2013, In: Analytical Chemistry. 85, 3, p. 1492-1500

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Animal manure fertiliser value, crop utilisation and soil quality impacts

    Jensen, Lars Stoumann, 2013, Animal manure recycling: treatment and management. Sommer, S. G., Christensen, M. L., Schmidt, T. & Jensen, L. S. (eds.). Wiley, p. 295-328 34 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  23. Published

    Animal manure recycling: treatment and management

    Sommer, S. G. (ed.), Christensen, M. L. (ed.), Schmidt, T. (ed.) & Jensen, Lars Stoumann (ed.), 2013, Wiley. 382 p.

    Research output: Book/ReportBookResearchpeer-review

  24. Published

    Animal manure residue upgrading and nutrient recovery in biofertilisers

    Jensen, Lars Stoumann, 2013, Animal manure recycling: treatment and management. Sommer, S. G., Christensen, M. L., Schmidt, T. & Jensen, L. S. (eds.). Wiley, p. 271-294

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  25. Published

    Arabidopsis phospholipase Dδ is involved in basal defense and nonhost resistance to powdery mildew fungi

    Pinosa, F., Buhot, N., Kwaaitaal, M. A. C. J., Fahlberg, P., Thordal-Christensen, Hans, Ellerström, M. & Andersson, M. X., 2013, In: Plant Physiology. 163, 2, p. 896-906 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Assessment of genetic diversity within sour cherry clones

    Clausen, S. K., Andersen, S. B., Henriksen, K., Toldam-Andersen, Torben & Grout, B. W. W., 2013, In: Scientia Horticulturae. 164, p. 556-562 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Battle through signaling between wheat and the fungal pathogen Septoria tritici revealed by proteomics and phosphoproteomics

    Yang, F., Braga, M. N. D. M., Larsen, M. R., Jørgensen, Hans Jørgen Lyngs & Palmisano, G., 2013, In: Molecular and Cellular Proteomics. 12, p. 2497-2508 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Published

    Betydning og værdisætning af kulstoflagring i forbindelse med tilførsel af organisk affald

    Bruun, Sander, Thorsen, Bo Jellesmark, Jensen, Lars Stoumann, Nielsen, M. P. & Bentsen, Niclas Scott, 2013, Miljøstyrelsen. 72 p. (Miljøprojekt; No. 1482).

    Research output: Book/ReportReportCommissioned

  29. Published

    Bimolecular fluorescence complementation and interaction of various Arabidopsis major intrinsic proteins expressed in yeast

    Murozuka, E., Hanisch, S., Pomorski, Thomas Guenther, Jahn, T. P. & Schjoerring, Jan K., 2013, In: Physiologia Plantarum. 148, 3, p. 422-431 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Botanicals, endophytes and plant growth-promoting rhizobacteria (PGPR) to control Black Sigatoka disease of banana in Uganda

    Mortensen, C. N., Collinge, David B., Jørgensen, Hans Jørgen Lyngs, Gumisiriya, C., Kumakech, A., Kateete, S. N. & Okori, P., 2013, Makerere University.

    Research output: Book/ReportReportResearch

  31. Published

    Characterization of two genes encoding metal tolerance proteins from Beta vulgaris subspecies maritima that confers manganese tolerance in yeast

    Erbasol, I., Bozdag, G. O., Koc, A., Pedas, P. & Karakaya, H. C., 2013, In: BioMetals. 26, 5, p. 795-804 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    Consumption of organic diets does not affect intake and absorption of zinc and copper in men: evidence from two cross-over trials

    Mark, A. B., Kápolna, E., Laursen, Kristian Holst, Halekoh, U., Rasmussen, S. K., Husted, Søren, Larsen, E. H. & Bügel, Susanne Gjedsted, 2013, In: Food & Function. 4, 3, p. 409-419 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    Detection of duplicates among repatriated Nordic spring barley (Hordeum vulgare L. s.l.) accessions using agronomic and morphological descriptors and microsatellite markers

    Lund, B., Ortiz, R., von Bothmer, R. & Andersen, S. B., 2013, In: Genetic Resources and Crop Evolution. 60, 1, p. 1-11 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    Development of a cost-effective diversity-maximising decision-support tool for in situ crop genetic resources conservation: the case of cacao

    Samuel, A. F., Drucker, A. G., Andersen, S. B., Simianer, H. & van Zonneveld, M., 2013, In: Ecological Economics. 96, p. 155-164 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published

    Diagnosing latent copper deficiency in intact barley leaves (Hordeum vulgare, L.) using near infrared spectroscopy

    van Maarschalkerweerd, M., Bro, Rasmus, Egebo, M. & Husted, Søren, 2013, In: Journal of Agricultural and Food Chemistry. 61, 46, p. 10901-10910 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    Dissecting plant iron homeostasis under short and long-term iron fluctuations

    Shirvanehdeh, B. D., Briat, J., Holm, P. B., Husted, Søren, Noeparvar, S. & Borg, S., 2013, In: Biotechnology Advances. 31, 8, p. 1292-1307 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. Published

    Effect of sterilization on mineralization of straw and black carbon

    Bobul'ská, L., Bruun, Sander & Fazekašová, D., 2013, In: Fresenius Environmental Bulletin. 22, 6, p. 1727-1730 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published

    Effects of elevated atmospheric CO2 on physiology and yield of wheat (Triticum aestivum L.): a meta-analytic test of current hypotheses

    Wang, L., Feng, Z. & Schjoerring, Jan K., 2013, In: Agriculture, Ecosystems & Environment. 178, p. 57-63 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    Effects of fertilization with urban and agricultural organic wastes in a field trial – Prokaryotic diversity investigated by pyrosequencing

    Poulsen, P. H. B., Abu Al-Soud, W., Bergmark, L., Magid, Jakob, Hansen, Lars Hestbjerg & Sørensen, Søren Johannes, 2013, In: Soil Biology & Biochemistry. 57, p. 784-893 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    Effects of fertilization with urban and agricultural organic wastes in a field trial – waste imprint on soil microbial activity

    Poulsen, P. H. B., Magid, Jakob, Luxhøi, J. & de Neergaard, Andreas, 2013, In: Soil Biology & Biochemistry. 57, p. 794-802 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Effects of gamma irradiation on starch digestibility of rice with different resistant starch content

    Shu, X., Xu, J., Wang, Y., Rasmussen, S. K. & Wu, D., 2013, In: International Journal of Food Science and Technology. 48, 1, p. 35-43 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Elevated atmospheric CO2 decreases the ammonia compensation point of barley plants

    Wang, L., Pedas, P., Eriksson, U. D. & Schjoerring, Jan K., 2013, In: Journal of Experimental Botany. 64, 10, p. 2713-2724 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    Environmental sustainability of traditional foods: the case of ancient apple cultivars in Northern Italy assessed by multifunctional LCA

    Cerutti, A. K., Bruun, Sander, Donno, D., Beccaro, G. L. & Bounous, G., 2013, In: Journal of Cleaner Production. 52, p. 245-252 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    First report of Elsinoe leaf and fruit spot and Elsinoe pyri on apple in Denmark

    Glazowska, S. E., Schiller, M., Lund, O. S., Johnston, P. R. & Korsgaard, M., 2013, In: Journal of Plant Pathology. 95, 4, Suppl., p. 4.76 1 p.

    Research output: Contribution to journalComment/debateResearch

  45. Published

    Function and regulation of plant major intrinsic proteins: the role in arsenic accumulation

    Popovic, M., 2013, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 108 p.

    Research output: Book/ReportPh.D. thesisResearch

  46. Published

    Fusarium graminearum and its interactions with cereal heads: studies in the proteomics era

    Yang, F., Jacobsen, S., Jørgensen, Hans Jørgen Lyngs, Collinge, David B., Svensson, B. & Finnie, C. S., 2013, In: Frontiers in Plant Science. 4, 37

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    Genetic differentiation of watermelon landrace types in Mali revealed by microsatellite (SSR) markers

    Nantoume, A. D., Andersen, S. B. & Jensen, B. D., 2013, In: Genetic Resources and Crop Evolution. 60, 7, p. 2129-2141 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Genetic differentiation of watermelon landraces in Mozambique using microsatellite markers

    Munisse, P., Jensen, B. D. & Andersen, S. B., 2013, In: African Journal of Biotechnology. 12, 36, p. 5513-5521 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Greenhouse gas and ammonia emissions from composting of animal manure and other organic waste products

    Chowdhury, M. A., 2013, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 230 p.

    Research output: Book/ReportPh.D. thesisResearch

  50. Published

    Heat tolerance in wheat: linking physiological phenotyping to quantitative genetics

    Sharma, D. K., 2013, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 182 p.

    Research output: Book/ReportPh.D. thesisResearch

  51. Published

    High levels of genetic and genotypic diversity in field populations of the barley pathogen Ramularia collo-cygni

    Hjortshøj, R. L., Ravnshøj, A. R., Nyman, M., Orabi, J., Backes, G. M., Pinnschmidt, H., Havis, N., Stougaard, J. & Stukenbrock, E. H., 2013, In: European Journal of Plant Pathology. 136, 1, p. 51-60 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. Published

    Improved sampling methods document decline in soil organic carbon stocks and concentrations of permanganate oxidizable carbon after transition from swidden to oil palm cultivation

    Bruun, Thilde Bech, Egay, K., Mertz, Ole & Magid, Jakob, 2013, In: Agriculture, Ecosystems & Environment. 178, p. 127–134 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review