Section for Plant and Soil Sciences

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  1. Published

    Identification of manganese efficiency candidate genes in winter barley (Hordeum vulgare) using genome wide association mapping

    Leplat, F. J. V., Pedas, P. R., Rasmussen, S. K. & Husted, Søren, 2016, In: BMC Genomics. 17, 15 p., 775.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Investigating the diversity of Pseudomonas spp. in soil using culture dependent and independent techniques

    Li, L., Abu Al-Soud, W., Bergmark, L., Riber, Leise, Hansen, Lars Hestbjerg, Magid, Jakob & Sørensen, Søren Johannes, 2013, In: Current Microbiology. 67, 4, p. 423-430 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Plant availability of phosphorus in five gasification biochars

    Li, X., Rubæk, G. H., Müller-Stöver, Dorette Sophie, Thomsen, T. P., Ahrenfeldt, J. & Sørensen, P., 2017, In: Frontiers in Sustainable Food Systems. 1, 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Physical localization of rRNA genes by two-colour fluorescent in-situ hybridization and sequence analysis of the 5S rRNA gene in Phalaris coerulescens

    Li, X., Guo, R., Pedersen, Carsten, Hayman, D. & Langridge, P., 3 Nov 1997, In: Hereditas. 126, 3, p. 289-294 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Temporal effects of thinning on soil organic carbon and carbon cycling-related enzyme activities in oak-pine mixed forests

    Li, Y., Ajloon, F. H., Wang, X., Malghani, Saadatullah, Yu, S., Ma, X., Li, Y. & Wang, W., 2023, In: Forest Ecology and Management. 545, 9 p., 121293.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Powdery mildew effectors AVRA1 and BEC1016 target the ER J-domain protein HvERdj3B required for immunity in barley

    Li, Z., Velásquez-Zapata, V., Elmore, J. M., Li, Xuan, Xie, Wenjun, Banerjee, S., Jørgensen, Hans Jørgen Lyngs, Pedersen, Carsten, Wise, R. P. & Thordal-Christensen, Hans, 2022, Cold Spring Harbor Laboratory, 35 p. (bioRxiv).

    Research output: Working paper › Preprint › Research

  7. Published

    Dissecting the F-bZIP Regulated Zinc Deficiency Response in Legumes and Zinc Hyperaccumulators

    Liao, Feixue, 2023, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  8. Published

    Regulation of the Zinc Deficiency Response in the Legume Model Medicago truncatula

    Liao, Feixue, Lilay, Grmay Hailu, Castro, P. H., Azevedo, H. & Assuncao, Ana, 2022, In: Frontiers in Plant Science. 13, 15 p., 916168.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Identification and functional verification of MON1, a target of the barley powdery mildew fungal effector CSEP0162

    Liao, W., 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 96 p.

    Research output: Book/Report › Ph.D. thesis › Research

  10. Published

    Barley endosomal MONENSIN SENSITIVITY1 is a target of the powdery mildew effector CSEP0162 and plays a role in plant immunity

    Liao, W., Nielsen, Mads Eggert, Pedersen, Carsten, Xie, Wenjun & Thordal-Christensen, Hans, 2023, In: Journal of Experimental Botany. 74, 1, p. 118-129

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Impact of iron-modified biochars on soil nitrous oxide emissions: Variations with iron salts and soil fertility

    Liao, X., Mao, S., Shan, Y., Gao, W., Wang, S. & Malghani, Saadatullah, 2024, In: Journal of Environmental Management. 356, 11 p., 120571.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Methane and nitrous oxide emissions and related microbial communities from mangrove stems on Qi'ao Island, Pearl River Estuary in China

    Liao, X., Wang, Y., Malghani, Saadatullah, Zhu, X., Cai, W., Qin, Z. & Wang, F., 2024, In: Science of the Total Environment. 915, 12 p., 170062.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Combined effects of biochar and biogas slurry on soil nitrogen transformation rates and N2O emission in a subtropical poplar plantation

    Liao, X., Mao, S., Chen, Y., Zhang, J., Müller, C. & Malghani, Saadatullah, 2022, In: Science of the Total Environment. 848, 157766.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    The Arabidopsis bZIP19 and bZIP23 Activity Requires Zinc Deficiency – Insight on Regulation From Complementation Lines

    Lilay, Grmay Hailu, Castro, P. H., Campilho, A. & Assuncao, Ana, 2019, In: Frontiers in Plant Science. 9, p. 1-13 1955.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Rice F-bZIP transcription factors regulate the zinc deficiency response

    Lilay, Grmay Hailu, Castro, P. H., Guedes, J. G., Almeida, D. M., Campilho, A., Azevedo, H., Aarts, M. G. M., Saibo, N. J. M. & Assuncao, Ana, 2020, In: Journal of Experimental Botany. 71, 12, p. 3664-3677 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Arabidopsis bZIP19 and bZIP23 act as zinc sensors to control plant zinc status

    Lilay, Grmay Hailu, Persson, Daniel Pergament, Castro, P. H., Liao, Feixue, Alexander, R. D., G.M. Aarts, M. & Assuncao, Ana, 2021, In: Nature Plants. 7, 2, p. 137-143 7 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  17. Published

    Linking the key physiological functions of essential micronutrients to their deficiency symptoms in plants

    Lilay, Grmay Hailu, Thiébaut, Noémie, du Mee, D., Assuncao, Ana, Schjoerring, Jan K., Husted, Søren & Persson, Daniel Pergament, 2024, In: New Phytologist. 242, 3, p. 881-902

    Research output: Contribution to journal › Review › Research › peer-review

  18. Published

    Zinc deficiency sensing and regulation in plants

    Lilay, Grmay Hailu, Castro, P. H. A. R. F., Almeida, D., Gusmão, J., Saibo, N., Azavedo, H., Aarts, M., Schjoerring, Jan K. & Assuncao, Ana, 2017, Proceedings Book: XVIII International Plant Nutrition Colloquium with Boron and Manganese Satellite Meetings. Carstensen, A., Laursen, K. H. & Schjoerring, J. K. (eds.). University of Copenhagen, p. 536-537 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  19. Published

    Molecular Mechanisms of Zinc Deficiency Sensing and Regulation in Arabidopsis thaliana

    Lilay, Grmay Hailu, 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  20. Published

    Evaluation of high throughput screening methods in picking up differences between cultivars of lignocellulosic biomass for ethanol production

    Lindedam, J., Bruun, Sander, Jørgensen, H., Decker, S. R., Turner, G. B., DeMartini, J. D., Wyman, C. E. & Felby, C., 2014, In: Biomass & Bioenergy. 66, p. 261-267 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Plant-substrate biochar properties critical for mediating reductive debromination of 1,2-dibromoethane

    Lindhardt, Jonathan Hessner, Holm, Peter Engelund, Zhu, Y. G., Lu, Changyong & Hansen, Hans Chr. Bruun, 2025, In: Journal of Environmental Sciences. 147, 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Biochar Mediators for Debromination of Brominated C2 Pollutants: Biochar substrates, characteristics, and activation

    Lindhardt, Jonathan Hessner, 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 195 p.

    Research output: Book/Report › Ph.D. thesis › Research

  23. Published

    Characterization of the Wheat Stripe Rust (Puccinia striiformis f. sp. tritici) Fungal Effector Candidate PEC6 and Its Corresponding Host Targets

    Liu, C., 2016, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 109 p.

    Research output: Book/Report › Ph.D. thesis › Research

  24. Published

    The stripe rust fungal effector PEC6 suppresses pattern-triggered immunity in a host species-independent manner and interacts with adenosine kinases

    Liu, C., Pedersen, Carsten, Schultz-Larsen, T., Aguilar, G. B., Hovmøller, M. S., Thordal-Christensen, Hans & Madriz Ordenana, Kenneth, 2016, In: New Phytologist. 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Methane emissions and microbial communities as influenced by dual cropping of Azolla along with early Rice

    Liu, J., Xu, H., Jiang, Y., Zhang, K., Hu, Y. & Zeng, Z., 2017, In: Scientific Reports. 7, 14 p., 40635.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Improving the nitrogen retention and fertilizer value of thermally dried digestate solids by addition of strong acid, alum or zeolite

    Liu, J., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  27. Published

    Comparison of Alum and Sulfuric Acid to Retain and Increase the Ammonium Content of Digestate Solids during Thermal Drying

    Liu, J., Jensen, Lars Stoumann & Müller-Stöver, Dorette Sophie, 2021, In: Nitrogen. 2, 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Increased retention of available nitrogen during thermal drying of solids of digested sewage sludge and manure by acid and zeolite addition

    Liu, J., de Neergaard, Andreas & Jensen, Lars Stoumann, 1 Dec 2019, In: Waste Management. 100, p. 306-317

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Methane emission and soil microbial communities in early rice paddy as influenced by urea-N fertilization

    Liu, J., Zang, H., Xu, H., Zhang, K., Jiang, Y., Hu, Y. & Zeng, Z., 2019, In: Plant and Soil. 445, p. 85-100

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Mobility of the syntaxin PEN1 in Arabidopsis reflects functional specialization of the conserved SYP12 clade

    Liu, Mengqi, Rubiato, H. M. & Nielsen, Mads Eggert, 2022, In: Plant Signaling & Behavior. 17, 1, 4 p., 2084278.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Plant membrane processes in plant-powdery mildew fungus interactions: new insights into regulatory mechanisms on specialized recycling of PEN1

    Liu, Mengqi, 2023, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 128 p.

    Research output: Book/Report › Ph.D. thesis › Research

  32. Published

    Exposure of cerium oxide nanoparticles to the hyperaccumulator Sedum alfredii decreases the uptake of cadmium via the apoplastic pathway

    Liu, Y., Persson, Daniel Pergament, Li, J., Liang, Y. & Li, T., 2021, In: Journal of Hazardous Materials. 417, 125955.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Assessing the variation in traits for manganese deficiency tolerance among maize genotypes

    Long, L., Kristensen, R. K., Guo, J., Chen, F., Pedas, P. R., Zhang, G., Schjoerring, Jan K. & Yuan, L., 2021, In: Environmental and Experimental Botany. 183, 104344.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    The iron-regulated transporter 1 plays an essential role in uptake, translocation and grain-loading of manganese, but not iron, in barley

    Long, L., Persson, Daniel Pergament, Duan, F., Jørgensen, Kirsten, Yuan, L., Schjoerring, Jan K. & Pedas, P. R., 2018, In: New Phytologist. 217, 4, p. 1640-1653 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Physiological, Biochemical and Molecular Characterization of Barley (Hordeum vulgare L.) and Maize (Zea mays L.) for Improving Manganese Efficiency

    Long, L., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  36. Published

    The iron-regulated transporter 1 (IRT1) plays an essential role in uptake, translocation and grain-loading of manganese in barley

    Long, L., Persson, Daniel Pergament, Duan, F., Jørgensen, Kirsten, Yuan, L., Schjoerring, Jan K. & Pedas, P. R., 2017, Proceedings Book: XVIII International Plant Nutrition Colloquium with Boron and Manganese Satellite Meetings. Carstensen, A., Laursen, K. H. & Schjoerring, J. K. (eds.). University of Copenhagen, p. 917-918 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  37. Published

    High light intensity aggravates latent manganese deficiency in maize

    Long, L., Pedas, P. R., Kristensen, R. K., Schulze, W. X., Husted, Søren, Zhang, G., Schjoerring, Jan K. & Yuan, L., 2020, In: Journal of Experimental Botany. 71, 19, p. 6116-6127 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Detection of duplicates among repatriated Nordic spring barley (Hordeum vulgare L. s.l.) accessions using agronomic and morphological descriptors and microsatellite markers

    Lund, B., Ortiz, R., von Bothmer, R. & Andersen, S. B., 2013, In: Genetic Resources and Crop Evolution. 60, 1, p. 1-11 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Next-generation sequencing technology for genetics and genomics of sorghum

    Luo, H., Mocoeur, A. R. J. & Jing, H., 2014, Genetics, genomics and breeding of sorghum. Wang, Y-H., Upadhyaya, H. D. & Kole, C. (eds.). CRC Press, p. 226-250 25 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  40. Published

    Low external input tropical agriculture: livelihoods, greenhouse gasses and sustainability: a study on the role of the system of rice intensification (SRI) in rain-fed lowland rice ecosystem in Cambodia

    Ly, P., 2012, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 143 p.

    Research output: Book/Report › Ph.D. thesis › Research

  41. Published

    Factors explaining variability in rice yields in a rain-fed lowland rice ecosystem in Southern Cambodia

    Ly, P., Jensen, Lars Stoumann, Bruun, Thilde Bech & de Neergaard, Andreas, 2016, In: NJAS - Wageningen Journal of Life Sciences. 78, p. 129-137 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Effects of rice straw, biochar and mineral fertiliser on methane (CH4) and nitrous oxide (N2O) emissions from rice (Oryza sativa L.) grown in a rain-fed lowland rice soil of Cambodia: a pot experiment

    Ly, P., Duong, Q. V., Jensen, Lars Stoumann, Pandey, A. & de Neergaard, Andreas, 2015, In: Paddy and Water Environment. 13, 4, p. 465-475 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Methane (CH4) and nitrous oxide (N2O) emissions from the system of rice intensification (SRI) under a rain-fed lowland rice ecosystem in Cambodia

    Ly, P., Jensen, Lars Stoumann, Bruun, Thilde Bech & de Neergaard, Andreas, 2013, In: Nutrient Cycling in Agroecosystems. 97, 1-3, p. 13-27 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Novel control-release fertilizers based on layered double hydroxides for manganese nutrition

    López Rayo, S., Hansen, Hans Chr. Bruun, Schjoerring, Jan K. & Magid, Jakob, 2017, Proceedings Book: XVIII International Plant Nutrition Colloquium with Boron and Manganese Satellite Meetings. Carstensen, A., Laursen, K. H. & Schjoerring, J. K. (eds.). University of Copenhagen, p. 935-936 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  45. Published

    Layered double hydroxides: potential release-on-demand fertilizers for plant zinc nutrition

    López Rayo, S., Imran, A., Hansen, Hans Chr. Bruun, Schjoerring, Jan K. & Magid, Jakob, 2017, In: Journal of Agricultural and Food Chemistry. 65, 40, p. 8779-8789 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Blood-derived compounds can efficiently prevent iron deficiency in the grapevine

    López Rayo, S., Di Foggia, M., Bombai, G., Yunta, F., Moreira, E. R., Filippini, G., Pisi, A. & Rombola, A. D., 2015, In: Australian Journal of Grape and Wine Research. 21, 1, p. 135-142

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Long-term amendment of urban and animal wastes equivalent to more than 100 years of application had minimal effect on plant uptake of potentially toxic elements

    López Rayo, S., Laursen, Kristian Holst, Lekfeldt, J. D. S., Grazie, F. D. & Magid, Jakob, 2016, In: Applied Soil Ecology. 231, p. 44-53 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Zinc doped layered double hydroxides: a new source for zinc fertilization

    López Rayo, S., Hansen, Hans Chr. Bruun, Schjoerring, Jan K. & Magid, Jakob, 2017, Proceedings Book: XVIII International Plant Nutrition Colloquium with Boron and Manganese Satellite Meetings. Carstensen, A., Laursen, K. H. & Schjoerring, J. K. (eds.). University of Copenhagen, p. 850-851 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  49. Published

    Nutrient supply to organic agriculture as governed by EU regulations and standards in six European countries

    Løes, A. K., Bünemann, E. K., Cooper, J., Hörtenhuber, S., Magid, Jakob, Oberson, A. & Möller, K., 2017, In: Organic Agriculture. 7, 4, p. 395-418 24 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Measuring phosphorus fluxes through the root zone of a layered sandy soil: comparisons between lysimeter and suction cell solution

    Magid, Jakob, CHRISTENSEN, N. & NIELSEN, H., 1 Jan 1992, In: JOURNAL OF SOIL SCIENCE. 43, 4, p. 739-747 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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