Section for Plant and Soil Sciences

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  1. Published

    Physiochemical properties of rice with contrasting resistant starch content

    Ding, Y., Huang, J., Zhang, N., Rasmussen, S. K., Wu, D. & Shu, X., Sep 2019, In: Journal of Cereal Science. 89, p. 1-7 102815.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Leaf morphology and stable isotope ratios of carbon and nitrogen in Acacia senegal (L.) Wild trees vary with climate at the geographic origin and ploidy level

    Diatta, O., Kjær, Erik Dahl, Diallo, A. M., Nielsen, Lene Rostgaard, Novak, V., Sanogo, D., Laursen, Kristian Holst, Hansen, Jon Kehlet & Ræbild, Anders, 2022, In: Trees. 36, p. 295-312 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Temporal and Spatial Patterns of Zinc and Iron Accumulation during Barley (Hordeum vulgare L.) Grain Development

    Detterbeck, A., Pongrac, P., Persson, Daniel Pergament, Vogel-Mikus, K., Kelemen, M., Vavpetic, P., Pelicon, P., Arcon, I., Husted, Søren, Schjoerring, Jan K. & Clemens, S., 2020, In: Journal of Agricultural and Food Chemistry. 68, 44, p. 12229-12240 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    The search for candidate genes associated with natural variation of grain Zn accumulation in barley

    Detterbeck, A., Nagel, M., Rensch, S., Weber, M., Börner, A., Persson, Daniel Pergament, Schjoerring, Jan K., Christov, V. & Clemens, S., 2 Jul 2019, In: Biochemical Journal. 476, 13, p. 1889-1909

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Genetic diversity and structure found in samples of Eritrean bread wheat

    Desta, Z. A., Orabi, J., Jahoor, A. & Backes, G., 2014, In: Plant Genetic Resources. 12, 1, p. 151-155 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    TILLING in plant disease control: applications and perspectives

    Desiderio, F., Torp, A. M., Vale, G. & Rasmussen, S. K., 2016, Plant pathogen resistance biotechnology. Collinge, D. B. (ed.). Wiley-Blackwell, p. 365-384 20 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  7. Published

    Suppression of XopQ–XopX-induced immune responses of rice by the type III effector XopG

    Deb, S., Gokulan, C. G., Nathawat, R., Patel, H. K. & Sonti, R. V., 2022, In: Molecular Plant Pathology. 23, 5, p. 634-648

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Policies for agricultural nitrogen management-trends, challenges and prospects for improved efficiency in Denmark

    Dalgaard, T., Hansen, B., Hasler, B., Hertel, O., Hutchings, N. J., Jacobsen, Brian H., Jensen, Lars Stoumann, Kronvang, B., Olesen, J. E., Schjoerring, Jan K., Kristensen, I. S., Graversgaard, M., Termansen, M. & Vejre, Henrik, 2014, In: Environmental Research Letters. 9, 11, 115002.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    DNMARK: Danish Nitrogen Mitigation Assessment: Research and Know-how for a Sustainable, Low-Nitrogen Food Production

    Dalgaard, T., Brock, S., Hansen, B., Hasler, B., Hertel, O., Hutchings, N. J., Jacobsen, Brian H., Jensen, Lars Stoumann, Kjeldsen, C., Kronvang, B., Olesen, J. E., Schjoerring, Jan K., Sigsgaard, T., Graversgaard, M., Hashemi, F., Turner, K., Vejre, Henrik, de Vries, W. & Wiborg, I. A., 2020, Just Enough Nitrogen: Perspectives on how to get there for regions with too much and too little nitrogen. Sutton, M. A., Mason, K. E., Bleeker, A., Hicks, W. K., Masso, C., Raghuram, N., Reis, S. & Bekunda, M. (eds.). Springer, p. 363-376 14 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  10. Published

    Solution scenarios and the effect of top down versus bottom up N mitigation measures: Experiences from the Danish Nitrogen Assessment

    Dalgaard, T., Brock, S., Børgesen, C. D., Graversgaard, M., Hansen, B., Hasler, B., Hertel, O., Hutchings, N. J., Jacobsen, B., Jensen, Lars Stoumann, Kjeldsen, C., Olesen, J. E., Schjoerring, Jan K., Sigsgaard, T., Andersen, Peter Stubkjær, Termansen, Mette, Vejre, Henrik, Odgaard, M. V., de Vries, W. & Wiborg, I., 2016. 4 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  11. Published

    High-throughput method for amino acid analysis of green biomass by single quadrupole MS detection

    Dahl-Lassen, R., van Hecke, J. J. J., Jørgensen, H. & Schjoerring, Jan K., 2017, Proceedings Book: XVIII International Plant Nutrition Colloquium with Boron and Manganese Satellite Meetings. Carstensen, A., Laursen, K. H. & Schjoerring, J. K. (eds.). University of Copenhagen, p. 833-834 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  12. Published

    High-throughput analysis of amino acids in plant materials by single quadrupole mass spectrometry

    Dahl-Lassen, R., van Hecke, J. J. J., Jørgensen, H., Bukh, C., Andersen, B. & Schjoerring, Jan K., 2018, In: Plant Methods. 14, 9 p., 8.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Brief oxygenation events in locally anoxic oceans during the Cambrian solves the animal breathing paradox

    Dahl, Tais Wittchen, Siggaard-Andersen, Marie-Louise, Schovsbo, E. H., Persson, Daniel Pergament, Husted, Søren, Hougård, Iben Winther, Dickson, A. J., Kjær, Kurt H. & Nielsen, Arne Thorshøj, 2019, In: Scientific Reports. 9, 9 p., 11669.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Factors affecting process temperature and biogas production in small-scale rural biogas digesters in winter in northern Vietnam

    Cuong, P. H., Vu, C. C., Sommer, S. G. & Bruun, Sander, 2014, In: Asian-Australasian Journal of Animal Sciences. 27, 7, p. 1050-1056 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Isotope Labeling to Study Phosphorus Uptake in the Arbuscular Mycorrhizal Symbiosis

    Cruz-Paredes, C. & Gavito, M. E., 2020, Arbuscular mycorrhizal fungi: Methods and protocols. N. F. & L. L. (eds.). Humana Press, p. 213-222 10 p. (Methods in Molecular Biology, Vol. 2146).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  16. Published

    Disentangling the abiotic and biotic components of AMF suppressive soils

    Cruz-Paredes, C., Diera, T., Davey, M., Rieckmann, Maria Monrad, Christensen, P., Dela Cruz, Majbrit, Laursen, Kristian Holst, Joner, E. J., Christensen, Jan H., Nybroe, O. & Jakobsen, Iver, 2021, In: Soil Biology and Biochemistry. 159, 11 p., 108305.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Different sensitivity of a panel of Rhizophagus isolates to AMF-suppressive soils

    Cruz-Paredes, C., Jakobsen, Iver & Nybroe, O., 2020, In: Applied Soil Ecology. 155, 5 p., 103662.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    The root external mycelium of mycorrhizal fungi has a key role in plant nutrition but is suppressed by the soil microbiota

    Cruz Paredes, C., Watts-Williams, S. J., Battini, F., Joner, E. J., Svenningsen, N. B., Dela Cruz, Majbrit, Christensen, Jan H., Nybroe, O. & Jakobsen, Iver, 2017, Proceedings Book: XVIII International Plant Nutrition Colloquium with Boron and Manganese Satellite Meetings. Carstensen, A., Laursen, K. H. & Schjoerring, J. K. (eds.). University of Copenhagen, p. 116-117 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  19. Published

    Suppression of arbuscular mycorrhizal fungal activity in a diverse collection of non-cultivated soils

    Cruz Paredes, C., Svenningsen, N. B., Nybroe, O., Kjøller, Rasmus, Frøslev, Tobias Guldberg & Jakobsen, Iver, Mar 2019, In: FEMS Microbiology Ecology. 95, 3, p. 1-10 fiz020.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Choosing co-substrates to supplement biogas production from animal slurry - a life cycle assessment of the environmental consequences

    Croxatto Vega, G. C., ten Hoeve, Marieke, Birkved, M., Sommer, S. G. & Bruun, Sander, 2014, In: Bioresource Technology. 171, p. 410-420 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Contrasting effects of nicotianamine synthase knockdown on zinc and nickel tolerance and accumulation in the zinc/cadmium hyperaccumulator Arabidopsis halleri

    Cornu, J., Deinlein, U., Hoereth, S., Braun, M., Schmidt, H., Weber, M., Persson, Daniel Pergament, Husted, Søren, Schjoerring, Jan K. & Clemens, S., 2015, In: New Phytologist. 206, 2, p. 738-750 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Phosphorus availability on many organically managed farms in Europe

    Cooper, J., Reed, E. Y., Hortenhuber, S., Lindenthal, T., Loes, A., Mader, P., Magid, Jakob, Oberson, A., Kolbe, H. & Moeller, K., 2018, In: Nutrient Cycling in Agroecosystems. 110, 2, p. 227-239

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Fungal endophytes in plants and their relationship to plant disease

    Collinge, David B., Jensen, Birgit & Jørgensen, Hans Jørgen Lyngs, 2022, In: Current Opinion in Microbiology. 69, 6 p., 102177.

    Research output: Contribution to journal › Review › Research › peer-review

  24. Published

    Searching for novel fungal biological control agents for plant disease control among endophytes

    Collinge, David B., Jørgensen, Hans Jørgen Lyngs, Latz, Meike, Manzotti, A., Ntana, F., Rojas Tayo, E. C. & Jensen, Birgit, 2019, Endophytes for a growing world. Hodkinson, T., Doohan, F., Saunders, M. & Murphy, B. (eds.). Cambridge University Press, p. 25-51 17 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  25. Published

    From BCA discovery in cereals to biological control of Fusarium head blight

    Collinge, David B., Khairoullina, A., Jørgensen, Hans Jørgen Lyngs & Jensen, Birgit, 2023, p. 58-59. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  26. Published

    The status and prospects for biotechnological approaches for attaining sustainable disease resistance

    Collinge, David B., Mullins, E., Jensen, Birgit & Jørgensen, Hans Jørgen Lyngs, 2016, Plant pathogen resistance biotechnology. Collinge, D. B. (ed.). Wiley-Blackwell, p. 1-20 20 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  27. Published

    The nature of induced defences in plants

    Collinge, David B., Andersen, C. H., Bryngelsson, T., Bentsen Christensen, A., Gregersen, P. L., Madriz Ordenana, Kenneth, Smedegaard-Petersen, V., Zhang, Z. & Thordal-Christensen, Hans, 1995, In: Aktuelt fra Skogforsk. 6, p. 4-5 2 p.

    Research output: Contribution to journal › Journal article › Communication

  28. Published

    The responses of plants to pathogens

    Collinge, David B., Borch, J., Madriz Ordenana, Kenneth & Newman, Mari-Anne, 2001, Molecular analysis of plant adaptation to the environment. Hawkesford, M. J. & Buchner, P. (eds.). Kluwer Academic Publishers Group, Vol. 1. p. 131-158 28 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Communication

  29. Published

    Characterization of Phosphate Transporters BdPT4 and BdPT8 in Mycorrhizal and Non-Mychorrhizal Brachypodium distachyon

    Clausen, S. S., 2016, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 135 p.

    Research output: Book/Report › Ph.D. thesis › Research

  30. Published

    Assessment of genetic diversity within sour cherry clones

    Clausen, S. K., Andersen, S. B., Henriksen, K., Toldam-Andersen, Torben & Grout, B. W. W., 2013, In: Scientia Horticulturae. 164, p. 556-562 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Improved Breeding of High-Carotene Carrots Through Marker-Assisted Paternity Selection and Raman Spectroscopy

    Clausen, S. K., Dahlke, S., Jørnsgård, B. & Rasmussen, S. K., 2023, Advanced Crop Improvements: Case Studies of Economically Important Crops. Raina, A., Wani, M. R., Laskar, R. A., Tomlekova, N. & Khan, S. (eds.). Springer, Vol. 2. p. 115-128 14 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  32. Published

    Limits to clonal selection in Danish sour cherry

    Clausen, S. K., Grout, B. W. W. & Toldam-Andersen, Torben, 2015, In: Acta Horticulturae. 1099, p. 703-709 7 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  33. Published

    The bifurcation of the cyanogenic glucoside and glucosinolate biosynthetic pathways

    Sørensen, Mette, Kannangara, R. M., Olsen, C. E., Blomstedt, C. K., Gleadow, R. M., Jørgensen, Kirsten, Bak, Søren, Motawie, Mohammed Saddik & Møller, Birger Lindberg, 2015, In: The Plant Journal. 84, 3, p. 558-573 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Våd natur kan give væsentlig klimaeffekt – men på lang sigt

    Christiansen, Jesper Riis, Jepsen, Martin Rudbeck, Ambus, Per Lennart, Elberling, Bo, Mueller, Carsten W., Bruun, Sander, Busck, Anne Gravsholt, Jensen, Lars Stoumann, Bruun, Hans Henrik, Krøijer, Stine, Jessen, Nina Toudal, Jessen, Søren & Stisen, S., 25 May 2022, BIO (DM).

    Research output: Other contribution › Net publication - Internet publication › Communication

  35. Published

    Increasing the value of Salicornia bigelovii green biomass grown in a desert environment through biorefining

    Christiansen, A. H. C., Lyra, D. A. & Jørgensen, H., 2021, In: Industrial Crops and Products. 160, 113105.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Topical delivery of PD-1 inhibitors with laser-assisted passive diffusion and active intradermal injection: Investigation of cutaneous pharmacokinetics and biodistribution patterns

    Christensen, R. L., Hendel, K. K., Persson, Daniel Pergament, Husted, Søren, Olesen, U. H. & Hædersdal, Merete, 2022, In: Lasers in Surgery and Medicine. 54, 1, p. 170-181

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Topical Delivery of Nivolumab, a Therapeutic Antibody, by Fractional Laser and Pneumatic Injection

    Christensen, R. L., Omland, S. H., Persson, Daniel Pergament, Husted, Søren, Hædersdal, Merete & Olesen, U. H., 2021, In: Lasers in Surgery and Medicine. 53, 1, p. 154-161 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Low Lignin Mutants and Reduction of Lignin Content in Grasses for Increased Utilisation of Lignocellulose

    Christensen, C. S. L. & Rasmussen, S. K., 21 May 2019, In: Agronomy. 9, 5, p. 1-21 256.

    Research output: Contribution to journal › Review › Research › peer-review

  39. Published

    Threatened status of neglected and underutilised Jatropha (Euphorbiaceae) species endemic to Mexico

    Christensen, C. S. L., Seal, C. E. & Rico-Arce, L., 2019, In: Revista Mexicana de Biodiversidad. 90, p. 1-16 e902903.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    The molecular characterization of two barley proteins establishes the novel PR-17 family of pathogenesis-related proteins

    Christensen, A. B., Cho, B., Naesby, M., Gregersen, P., Brandt, J., Madriz Ordenana, Kenneth, Collinge, David B. & Thordal-Christensen, Hans, May 2002, In: Molecular Plant Pathology. 3, 3, p. 135-144

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    The germinlike protein GLP4 exhibits superoxide dismutase activity and is an important component of quantitative resistance in wheat and barley

    Christensen, Anders, Thordal-Christensen, Hans, Zimmermann, G., Gjetting, T., Lyngkjær, M. F., Dudler, R. & Schweizer, P., 2004, In: Molecular Plant - Microbe Interactions. 17, 1, p. 109-117 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Phosphorus availability from the solid fraction of pig slurry is altered by composting or thermal treatment

    Christel, W., Bruun, Sander, Magid, Jakob & Jensen, Lars Stoumann, 2014, In: Bioresource Technology. 169, p. 543-551 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Pig slurry acidification, separation technology and thermal conversion affect phosphorus availability in soil amended with the derived solid fractions, chars or ashes

    Christel, W., Bruun, Sander, Magid, Jakob, Kwapinski, W. & Jensen, Lars Stoumann, 2016, In: Plant and Soil. 401, 1, p. 93-107 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Spatiotemporal dynamics of phosphorus release, oxygen consumption and greenhouse gas emissions after localised soil amendment with organic fertilisers

    Christel, W., Zhu, K., Hoefer, C., Kreuzeder, A., Santner, J., Bruun, Sander, Magid, Jakob & Jensen, Lars Stoumann, 2016, In: Science of the Total Environment. 554-555, p. 119-129 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Measuring phosphorus availability in recently fertilized soils with the diffusive gradient in thin films (DGT) method - challenges and opportunities

    Christel, W., Lemming, C., Mundus, S., Bruun, Sander, Magid, Jakob & Jensen, Lars Stoumann, 2016, In: Communications in Soil Science and Plant Analysis. 47, 5, p. 563-570 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Upgrading of the Solid Fraction of Pig Slurry as Phosphorus Fertilizer: The Impact of Biological and Thermal Processing on P Availability

    Christel, W., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 185 p.

    Research output: Book/Report › Ph.D. thesis › Research

  47. Published

    Prediction of changes in important physical parameters during composting of separated animal slurry solid fractions

    Chowdhury, M. A., de Neergaard, Andreas & Jensen, Lars Stoumann, 2014, In: Environmental Technology. 35, 2, p. 220-231 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Potential of aeration flow rate and bio-char addition to reduce greenhouse gas and ammonia emissions during manure composting

    Chowdhury, M. A., de Neergaard, Andreas & Jensen, Lars Stoumann, 2014, In: Chemosphere. 97, p. 16-25 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Greenhouse gas and ammonia emissions from composting of animal manure and other organic waste products

    Chowdhury, M. A., 2013, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 230 p.

    Research output: Book/Report › Ph.D. thesis › Research

  50. Published

    Composting of solids separated from anaerobically digested animal manure: effect of different bulking agents and mixing ratios on emissions of greenhouse gases and ammonia

    Chowdhury, M. A., de Neergaard, Andreas & Jensen, Lars Stoumann, 2014, In: Biosystems Engineering. 124, p. 63-77 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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