Section for Plant and Soil Sciences

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  1. Published

    Regulation of Tomato Specialised Metabolism after Establishment of Symbiosis with the Endophytic Fungus Serendipita indica

    Ntana, F., Johnson, S. R., Hamberger, B., Jensen, Birgit, Jørgensen, Hans Jørgen Lyngs & Collinge, David B., 2022, In: Microorganisms. 10, 17 p., 194.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    A sesquiterpene synthase from the endophytic fungus Serendipita indica catalyzes formation of viridiflorol

    Ntana, F., Bhat, W. W., Johnson, S. R., Jørgensen, Hans Jørgen Lyngs, Collinge, David B., Jensen, Birgit & Hamberger, B., 2021, In: Biomolecules. 11, 6, 16 p., 898.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Succession of the wheat seed-associated microbiome as affected by soil fertility level and introduction of Penicillium and Bacillus inoculants in the field

    Nunes, I., Hansen, Veronika, Bak, Frederik, Bonnichsen, L., Su, J., Hao, X., Raymond, Nelly Sophie, Nicolaisen, Mette Haubjerg, Jensen, Lars Stoumann & Nybroe, O., 2022, In: FEMS Microbiology Ecology. 98, 3, 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Phytase-active lactic acid bacteria from sourdoughs: isolation and identification

    Nuobariene, L., Cizeikiene, D., Gradzeviciute, E., Hansen, Åse Solvej, Rasmussen, S. K., Juodeikiene, G. & Vogensen, Finn Kvist, 2015, In: Lebensmittel - Wissenschaft und Technologie. 63, 1, p. 766-772 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Combining organic and inorganic nitrogen fertilisation reduces N2O emissions from cereal crops: a comparative analysis of China and Zimbabwe

    Nyamadzawo, G., Shi, Y., Chirinda, N., Olesen, J. E., Mapanda, F., Wuta, M., Wu, W., Meng, F., Oelofse, M., de Neergaard, Andreas & Smith, J., 2017, In: Mitigation and Adaptation Strategies for Global Change. 22, 2, p. 233-245 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Combining organic and inorganic nitrogen fertilisation reduces N2O emissions from cereal crops: a comparative analysis of China and Zimbabwe

    Nyamadzawo, G., Shi, Y., Chirinda, N., Olesen, J. E., Mapanda, F., Wuta, M., Wu, W., Meng, F., Oelofse, M., de Neergaard, Andreas & Smith, J., 2014, In: Mitigation and Adaptation Strategies for Global Change. 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Lignocellulosic residues for production of electricity, biogas or second generation biofuel: a case study of technical and sustainable potential of rice straw in Mali

    Nygaard, I., Dembele, F., Daou, I., Mariko, A., Kamissoko, F., Coulibaly, N., Borgstrøm, R. L. & Bruun, Thilde Bech, 2016, In: Renewable & Sustainable Energy Reviews. 61, p. 202-212 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Do soil organic carbon levels affect potential yields and nitrogen use efficiency? An analysis of winter wheat and spring barley field trials

    Oelofse, M., Markussen, Bo, Knudsen, L., Schelde, K., Olesen, J. E., Jensen, Lars Stoumann & Bruun, Sander, 4 Mar 2015, In: European Journal of Agronomy. 66, p. 62-73 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    The implications of phasing out conventional nutrient supply in organic agriculture: Denmark as a case

    Oelofse, M., Jensen, Lars Stoumann & Magid, Jakob, 2013, In: Organic Agriculture - Official journal of The International Society of Organic Agriculture Research. 3, 1, p. 41-55 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    The impact of black wattle encroachment of indigenous grasslands on soil carbon, Eastern Cape, South Africa

    Oelofse, M., Birch-Thomsen, Torben, Magid, Jakob, de Neergaard, Andreas, van Deventer, R., Bruun, Sander & Hill, T., 2016, In: Biological Invasions. 18, 2, p. 445-456 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Mother-plant-mediated pumping of zinc into the developing seed

    Olsen, L. I., Hansen, Thomas Hesselhøj, Laruelle, C., Østerberg, J. T., Hoffmann, R. D., Liesche, J., Krügel, U., Surblé, S., Cadarsi, S., Samson, V. A., Grolimund, D., Husted, Søren & Palmgren, Michael, 2016, In: Nature Plants. 2, 6 p., 16036.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Changes in allelic frequency over time in European bread wheat (Triticum aestivum L.) varieties revealed using DArT and SSR markers

    Orabi, J., Jahoor, A. & Backes, G. M., 2014, In: Euphytica. 197, 3, p. 447-462 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Climate-smartness of smallholder crop-livestock systems: Insights from Central Kenya

    Ortiz-Gonzalo, Daniel, 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  14. Published

    Multi-scale measurements show limited soil greenhouse GAS emissions in Kenyan smallholder coffee-dairy systems

    Ortiz-Gonzalo, Daniel, de Neergaard, Andreas, Vaast, P., Suárez-Villanueva, V., Oelofse, M. & Rosenstock, T. S., 2018, In: Science of the Total Environment. 626, p. 328-339 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Farm-scale greenhouse gas balances, hotspots and uncertainties in smallholder crop-livestock systems in Central Kenya

    Ortiz-Gonzalo, Daniel, Vaast, P., Oelofse, M., de Neergaard, Andreas, Albrecht, A. & Rosenstock, T. S., 2017, In: Applied Soil Ecology. 248, p. 58-70 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Understanding the relationship between livelihood strategy and soil management: empirical insights from the central highlands of Ethiopia

    Oumer, A. M., Hjortsø, Carsten Nico Portefée & de Neergaard, Andreas, 2013, In: Food Security. 5, 2, p. 143-156 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Inhibitory serpins from wheat grain with reactive centers resembling glutamine-rich repeats of prolamin storage proteins. Cloning and characterization of five major molecular forms

    Oøstergaard, H., Rasmussen, S. K., Roberts, T. H. & Hejgaard, J., 27 Oct 2000, In: Journal of Biological Chemistry. 275, 43, p. 33272-33279 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Heat Stress Affects Pi-related Genes Expression and Inorganic Phosphate Deposition/Accumulation in Barley

    Pacak, A., Barciszewska-Pacak, M., Swida-Barteczka, A., Kruszka, K., Sega, P., Milanowska, K., Jakobsen, Iver, Jarmolowski, A. & Szweykowska-Kulinska, Z., 2016, In: Frontiers in Plant Science. 7, 19 p., 926.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Plant Actin Cytoskeleton: New Functions from Old Scaffold

    Paez-Garcia, A., Sparks, J. A., de Bang, L. & Blancaflor, E. B., 2018, Concepts in Cell Biology - History and Evolution. Sahi, V. P. & Baluška, F. (eds.). Springer, Vol. 23. p. 103-137 35 p. (Plant Cell Monographs, Vol. 23).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  20. Published

    Organic matter and water management strategies to reduce methane and nitrous oxide emissions from rice paddies in Vietnam

    Pandey, A., Mai, V. T., Duong, Q. V., Bui, T. P. L., Mai, T. L. A., Jensen, Lars Stoumann & de Neergaard, Andreas, 2014, In: Agriculture, Ecosystems and Environment. 196, p. 137-146 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Identification of a bio-signature for barley resistance against Pyrenophora teres infection based on physiological, molecular and sensor-based phenotyping

    Pandey, Chandana, Großkinsky, D. K., Westergaard, Jesper Cairo, Jørgensen, Hans Jørgen Lyngs, Svensgaard, J., Christensen, Svend, Schulz, Alexander & Roitsch, Thomas Georg, 2021, In: Plant Science. 313, 11 p., 111072.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Nutrient uptake efficiency in ryegrass fertilized with dried digestate solids as affected by acidification and drying temperature

    Pantelopoulos, A., Magid, Jakob, Jensen, Lars Stoumann & Fangueiro, D., 2017, In: Plant and Soil. 421, 1-2, p. 401-416 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Net and gross nitrogen turnover in soil amended with acidified and differently dried solids from biogas digestate

    Pantelopoulos, A., Magid, Jakob & Jensen, Lars Stoumann, 2016, In: Soil Science Society of America Journal. 80, 4, p. 943-953 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Thermal drying of the solid fraction from biogas digestate: effects of acidification, temperature and ventilation on nitrogen content

    Pantelopoulos, A., Magid, Jakob & Jensen, Lars Stoumann, 2016, In: Waste Management. 48, p. 218-226 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Thermochemical treatment of biogas digestate solids to produce organic fertilisers: The effect of acidification and drying on N losses, soil N turnover and plant fertilizer value

    Pantelopoulos, A., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 118 p.

    Research output: Book/Report › Ph.D. thesis › Research

  26. Published

    Compound-specific δ15N and δ13C analyses of amino acids for potential discrimination between organically and conventionally grown wheat

    Paolini, M., Ziller, L., Laursen, Kristian Holst, Husted, Søren & Camin, F., 2015, In: Journal of Agricultural and Food Chemistry. 63, 25, p. 5841-5850 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Biorefining in the prevailing energy and materials crisis: A review of sustainable pathways for biorefinery value chains and sustainability assessment methodologies

    Parajuli, R., Dalgaard, T., Jørgensen, U., Adamsen, A. P. S., Knudsen, M. T., Birkved, M., Gylling, M. & Schjoerring, Jan K., 2015, In: Renewable & Sustainable Energy Reviews. 43, p. 244-263 20 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Dry-seeded and aerobic rice cultivation

    Parthasarathi, T., Tariq, Azeem & et al., E. A., 2017, Achieving sustainable cultivation of rice: Cultivation, pest and disease management. Sasaki, T. (ed.). Burleigh Dodds Science Publishing Limited, Vol. 2. p. 105-120

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Communication

  29. Published

    Silicon alleviates iron deficiency in cucumber by promoting mobilization of iron in the root apoplast

    Pavlovic, J., Samardzic, J., Maksimović, V., Timotijevic, G., Stevic, N., Laursen, Kristian Holst, Hansen, Thomas Hesselhøj, Husted, Søren, Schjoerring, Jan K., Liang, Y. & Nikolic, M., 2013, In: New Phytologist. 198, 4, p. 1096-1107 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Silicon enhances leaf remobilization of iron in cucumber under limited iron conditions

    Pavlovic, J., Samardzic, J., Kostic, L., Laursen, Kristian Holst, Natic, M., Timotijevic, G., Schjoerring, Jan K. & Nikolic, M., 2016, In: Annals of Botany. 118, 2, p. 271-280 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    An NPF transporter exports a central monoterpene indole alkaloid intermediate from the vacuole

    Payne, R., Xu, Deyang, Foureau, E., Ines Soares Teto Carqueijeiro, M., Oudin, A., Dugé de Bernonville, T., Novák, V., Burow, Meike, Olsen, C. E., Jones, D. M., C. Tatsis, E., Pendleton, A., Halkier, Barbara Ann, Geu-Flores, Fernando, Courdavault, V., Nour-Eldin, Hussam Hassan & O'Connor, S. E., 2017, In: Nature Plants. 3, 9 p., 16208.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Bacillus cereus EC9 protects tomato against Fusarium wilt through JA/ET-activated immunity

    Pazarlar, Sercan, Madriz Ordenana, Kenneth & Thordal-Christensen, Hans, 2022, In: Frontiers in Plant Science. 13, 13 p., 1090947.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Golgi localized barley MTP8 proteins facilitate Mn transport

    Pedas, P. R., Schiller, M., Hegelund, J. N., Ladegaard, A. H., Schjoerring, Jan K. & Husted, Søren, 2014, In: PLOS ONE. 9, 12, 21 p., e113759.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    The relationship between physical and genetic distances at the Hor1 and Hor2 loci of barley estimated by two-colour fluorescent in situ hybridization

    Pedersen, Carsten & Linde-Laursen, I., 1 Nov 1995, In: Theoretical and Applied Genetics. 91, 6-7, p. 941-946 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Genome and chromosome identification in cultivated barley and related species of the Triticeae (Poaceae) by in situ hybridization with the GAA-satellite sequence

    Pedersen, Carsten, Rasmussen, S. K. & Linde-Laursen, I., 1 Jan 1996, In: Genome. 39, 1, p. 93-104 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Towards an Integration of the Physical and the Genetic Chromosome Maps of Barley by in Situ Hybridization

    Pedersen, Carsten, Giese, H. & Linde‐Laursen, I., 1 Jan 1995, In: Hereditas. 123, 1, p. 77-88 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Identification of the entire chromosome complement of bread wheat by two-colour FISH

    Pedersen, Carsten & Langridge, P., 1 Jan 1997, In: Genome. 40, 5, p. 589-593 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Localization of introduced genes on the chromosomes of transgenic barley, wheat and triticale by fluorescence in situ hybridization

    Pedersen, Carsten, Zimny, J., Becker, D., Jähne-Gärtner, A. & Lörz, H., 1 May 1997, In: Theoretical and Applied Genetics. 94, 6-7, p. 749-757 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Chromosomal locations of four minor rDNA loci and a marker microsatellite sequence in barley

    Pedersen, Carsten & Linde-Laursen, I., 1 Jan 1994, In: Chromosome Research. 2, 1, p. 65-71 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Assessment of risks related to agricultural use of sewage sludge, pig and cattle slurry

    Pedersen, K. E., Brandt, Kristian Koefoed, Hansen, M., Cedergreen, Nina & Magid, Jakob, 2019, Department of Plant and Environmental Sciences, University of Copenhagen. 143 p.

    Research output: Book/Report › Report › Research

  41. Published

    Characterization and partial purification of β-1,3-d-glucan (callose) synthase from barley (Hordeum vulgare) leaves

    Pedersen, L. H., Jacobsen, S., Hejgaard, J. & Rasmussen, S. K., 1 Jan 1993, In: Plant Science. 91, 2, p. 127-138 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Straw export in continuous winter wheat and the ability of oil radish catch crops and early sowing of wheat to offset soil C and N losses: a simulation study

    Peltre, C., Nielsen, M. P., Christensen, B. T., Hansen, E. M., Thomsen, I. K. & Bruun, Sander, 2016, In: Agricultural Systems. 143, p. 195-202 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Repeated soil application of organic waste amendments reduces draught force and fuel consumption for soil tillage

    Peltre, C., Nyord, T., Bruun, Sander, Jensen, Lars Stoumann & Magid, Jakob, 2015, In: Agriculture, Ecosystems & Environment. 211, p. 94-101 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Repeated application of organic waste affects soil organic matter composition: evidence from thermal analysis, FTIR-PAS, amino sugars and lignin biomarkers

    Peltre, C., Gregorich, E. G., Bruun, Sander, Jensen, Lars Stoumann & Magid, Jakob, 2017, In: Soil Biology & Biochemistry. 104, p. 117-127 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Assessing soil constituents and labile soil organic carbon by mid-infrared photoacoustic spectroscopy

    Peltre, C., Bruun, Sander, Du, C., Thomsen, I. K. & Jensen, Lars Stoumann, 2014, In: Soil Biology & Biochemistry. 77, p. 41-50 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Proteomics insights into the responses of Saccharomyces cerevisiae during mixed-culture alcoholic fermentation with Lachancea thermotolerans

    Peng, C., Andersen, B., Arshid, S., Larsen, M. R., Albergaria, H., Lametsch, Rene & Arneborg, Nils, 1 Sep 2019, In: FEMS Microbiology Ecology. 95, 9, p. 1-16 fiz126.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    CRISPR/Cas9-mediated phospholipase C 2 knock-out tomato plants are more resistant to Botrytis cinerea

    Perk, E. A., Arruebarrena Di Palma, A., Colman, S., Mariani, O., Cerrudo, I., d'Ambrosio, Juan Martin, Robuschi, L., Pombo, M. A., Rosli, H. G., Villareal, F. & Laxalt, A. M., 2023, In: Planta. 257, 6, 6 p., 117.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Molecular speciation and tissue compartmentation of zinc in durum wheat grains with contrasting nutritional status

    Persson, Daniel Pergament, de Bang, T. C., Pedas, P. R., Kutman, U. B., Cakmak, I., Andersen, B., Finnie, C., Schjoerring, Jan K. & Husted, Søren, 2016, In: New Phytologist. 211, 4, p. 1255-1265 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Multi element bioimaging of Arabidopsis thaliana roots

    Persson, Daniel Pergament, Chen, A., Salt, D., Aarts, M. M. G., Schjoerring, Jan K. & Husted, Søren, 2017, Proceedings Book: XVIII International Plant Nutrition Colloquium with Boron and Manganese Satellite Meetings. Carstensen, A., Laursen, K. H. & Schjoerring, J. K. (eds.). University of Copenhagen, p. 817-818 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  50. Published

    Multi-element bioimaging of Arabidopsis thaliana roots

    Persson, Daniel Pergament, Chen, A., Aarts, M. G. M., Salt, D. E., Schjoerring, Jan K. & Husted, Søren, 2016, In: Plant Physiology. 172, 2, p. 835-847 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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