Søren Bak

Søren Bak

Professor

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    ORCID: 0000-0003-4100-115X

    Introductory remarks on publicationslist

    ResearcherID H-4404-2014

    ORCID 0000-0003-4100-115X


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    1. Published

      Glucosinolate turnover in Brassicales species to an oxazolidin-2-one, formed via the 2-thione and without formation of thioamide

      Agerbirk, Niels, Matthes, A., Erthmann, P. Ø., Ugolini, L., Cinti, S., Lazaridi, E., Nuzillard, J., Mueller, C., Bak, Søren, Rollin, P. & Lazzeri, L., 2018, In: Phytochemistry. 153, p. 79-93

      Research output: Contribution to journal › Journal article › Research › peer-review

    2. Published

      Multiple hydroxyphenethyl glucosinolate isomers and their tandem mass spectrometric destinction in a geographically structured polymorphism in the crucifer Barbarea vulgaris

      Agerbirk, Niels, Olsen, C. E., Heimes, C., Christensen, S., Bak, Søren & Hauser, T. P., 2015, In: Phytochemistry. 115, p. 130-142 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      Metabolic engineering of cucurbitacins in Cucurbita pepo hairy roots

      Almeida, A., Dong, L., Thorsen, T. H., Raadam, Morten Hessellund, Khakimov, Bekzod, Carreno-Quintero, N., Kampranis, Sotirios & Bak, Søren, 2022, In: Frontiers in Plant Science. 13, 18 p., 1021907.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. Published

      A Single Oxidosqualene Cyclase Produces the Seco-Triterpenoid α-Onocerin

      Almeida, A., Dong, L., Khakimov, Bekzod, Bassard, J. A., Moses, T., Lota, F., Goossens, A., Appendino, G. & Bak, Søren, 2018, In: Plant Physiology. 176, 2, p. 1469-1484 16 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      Plant triterpenoids with bond-missing skeletons: biogenesis, distribution and bioactivity

      Almeida, A., Dong, L., Appendino, G. & Bak, Søren, 2020, In: Natural Product Reports. 37, 22 p.

      Research output: Contribution to journal › Review › Research › peer-review

    6. Published

      Lessons learned from metabolic engineering in hairy roots: Transcriptome and metabolic profile changes caused by Rhizobium-mediated plant transformation in Cucurbitaceae species

      Almeida, A., Favero, Bruno Trevenzoli, Dong, L., Cárdenas, Pablo D., Saenz-Mata, J., Lütken, Henrik Vlk & Bak, Søren, Aug 2023, In: Plant Physiology and Biochemistry. 201, 8 p., 107797.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      UDP-glycosyltransferases from the UGT73C subfamily in Barbarea vulgaris catalyse Sapogenin 3-O-glucosylation in Saponin-mediated Insect resistance

      Augustin, J. M., Drok, S., Shinoda, T., Sanmiya, K., Nielsen, J. K., Khakimov, Bekzod, Olsen, C. E., Hansen, E. H., Poulsen, V. K., Ekstrøm, Claus Thorn, Hauser, T. P. & Bak, Søren, 2012, In: Plant Physiology. 160, 4, p. 1881-1895 15 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. Published

      Molecular activities, biosynthesis and evolution of triterpenoid saponins

      Augustin, J. M., Poulsen, V. K., Andersen, S. B. & Bak, Søren, 2011, In: Phytochemistry. 72, 6, p. 435-457 23 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      Unraveling the biosynthetic pathway of triterpenoid saponins in Barbarea vulgaris

      Augustin, J. M., Poulsen, V. K., Andersen, S. B., Nielsen, J. K. & Bak, Søren, 2009. 1 p.

      Research output: Contribution to conference › Conference abstract for conference › Research

    10. Published

      Unraveling the biosynthetic pathway of triterpenoid saponins in Barbarea vulgaris

      Augustin, J. M., Poulsen, V. K., Andersen, S. B., Nielsen, J. K. & Bak, Søren, 2009. 1 p.

      Research output: Contribution to conference › Poster › Research

    11. Published

      CYP83B1, a cytochrome P450 at the metabolic branch point in auxin and indole glucosinolate biosynthesis in Arabidopsis

      Bak, Søren, Tax, F. E., Feldmann, K. A., Galbraith, D. W. & Feyereisen, R., 2001, In: Plant Cell. 13, p. 101-111 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    12. Published

      The ¤involvement of two P450 enzymes, CYP83B1 and CYP83A1, in auxin homeostasis and glucosinolate biosynthesis

      Bak, Søren & Feyereisen, R., 2001, In: Plant Physiology. 127, p. 108-118 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    13. Published

      Metabolic engineering of p-hydroxybenzylglucosinolate in Arabidopsis by expression of the cyanogenic CYP79A1 from Sorghum bicolor

      Bak, Søren, Olsen, C. E., Petersen, Bent L, Møller, Birger Lindberg & Halkier, Barbara Ann, 1999, In: Plant Journal. 20, 6, p. 663-671 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    14. Published

      Plant-Insect Interactions as a Response to Metabolic Engineering of natural Product Synthesis studied by Functional Genomics in Lotus japonicus

      Bak, Søren, Forslund, K., Møller, Birger Lindberg & Jørgensen, B., 2003, In: Plant Physiology. 131, p. 844-846 3 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    15. Published

      Cloning of three A-type cytochromes P450, CYP71E1, CYP98, and CYP99 from Sorghum bicolor (L.) Moench by a PCR approach and identification by expression in Escherichia coli of CYP71E1 as a multifunctional cytochrome P450 in the biosynthesis of the cyanogenic glucoside dhurrin

      Bak, Søren, Kahn, R. A., Linde Nielsen, H., Møller, Birger Lindberg & Halkier, B. A., 1998, In: Plant Molecular Biology. 36, p. 393-405 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    16. Published

      The ¤presence of CYP79 homologues in glucosinolate-producing plants shows evolutionary conservation of the enzymes in the conversion of amino acid to aldoxime in the biosynthesis of cyanogenic glucosides and glucosinolates

      Bak, Søren, Linde Nielsen, H. & Halkier, B. A., 1998, In: Plant Molecular Biology. 38, p. 725-734 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    17. Published

      Cloning and expression in Escherichia coli of the obtusifoliol 14alfa-demethylase of Sorghum bicolor (L.) Moench, a cytochrome P450 orthologous to the sterol 14alfa-demethylases (CYP51) from fungi and mammals

      Bak, Søren, Kahn, R. A., Olsen, C. E. & Halkier, B. A., 1997, In: Plant Journal. 11, 2, p. 191-201 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    18. Published

      Cloning of cytochromes P450 involved in primary and secondary metabolism in Sorghum bicolor (L.) Moench

      Bak, Søren, 1997, Copenhagen: The Royal Veterinary and Agricultural University, Department of Plant Biology, Plant Biochemistry Laboratorium. 88 p.

      Research output: Book/Report › Ph.D. thesis › Research

    19. Published

      Cyanogenic glycosides: a case study for evolution and application of cytochromes P450

      Bak, Søren, Paquette, S. M., Morant, M., Morant, A. V., Saito, S., Bjarnholt, Nanna, Zagrobelny, M., Jørgensen, Kirsten, Osmani, S. A., Hamann, T., Simonsen, H. T., Sánchez-Pérez, R., van Heeswijck, T. B., Jørgensen, B. & Møller, Birger Lindberg, 2006, In: Phytochemistry Reviews. 5, 2-3, p. 309-329 21 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. Published

      Lessons to be learned from metabolic engineering of cyanogenic glucosides

      Bak, Søren, 2007. 1 p.

      Research output: Contribution to conference › Conference abstract for conference › Research

    21. Published

      Transgenic tobacco and arabidopsis plants expressing the two multifunctional sorghum cytochrome P450 enzymes, CYP79A1 and CYP71E1, are cyanogenic and accumulate metabolites derived from intermediates in dhurrin biosynthesis

      Bak, Søren, Olsen, C. E., Halkier, Barbara Ann & Møller, Birger Lindberg, 2000, In: Plant Physiology. 123, p. 1437-1448 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Published

      The impact of cytochromes P450 in evolution of cyanogenic glucosides in terrestrial plants

      Bak, Søren, 2006, Programme and abstracts. Biochemical Society, 1 p.

      Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

    23. Published

      Use of DNA microarrays for transcriptome analysis in plants

      Bak, Søren, 2008.

      Research output: Contribution to conference › Conference abstract for conference › Research

    24. Published

      Tjek på Biotek

      Bak, Søren, Collinge, David B., Møller, Birger Lindberg, Holm, P. B., Haldrup, Anna, Sandøe, Peter & Poulsen, G. S., 2004, Tjek på Biotek - Elevhæfte til undervisning på gymnasiet. A. Haldrup og L. Bruun (ed.). København: Center for Skov, Landskab og Planlægning/Københavns Universitet, p. 1-60 60 p.

      Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Communication

    25. Published

      Metabolic engineering of natural products: possibilities and constraints

      Bak, Søren, 2001.

      Research output: Contribution to conference › Conference abstract for conference › Research

    26. Published

      Phylogeny, gene organization, and diversity of the 273 cytochromes P450 in the Arabidopsis genome

      Bak, Søren, 2002.

      Research output: Contribution to conference › Conference abstract for conference › Research

    27. Published

      Cyanogenic glucosides and plant-insect interactions

      Bak, Søren, 2004.

      Research output: Contribution to conference › Conference abstract for conference › Research

    28. Published

      Use of global untargeted metabolite profiling to identify correlation between natural variation in the metabolome and plant insect resistance

      Bak, Søren, Ekstrøm, Claus Thorn, Olsen, C. E., Nielsen, J. K., Rudemo, M. E. & Andersen, S. B., 2007. 1 p.

      Research output: Contribution to conference › Poster › Research

    29. Published

      Naturlig variation og risikovurdering af planter

      Bak, Søren, Andersen, S. B., Nielsen, J. K. & Ekstrøm, Claus Thorn, 2007. 2 p.

      Research output: Contribution to conference › Paper › Research

    30. Published

      Metabolic engineering of dhurrin in transgenic Arabidopsis plants with marginal inadvertent effects on the metabolome and transcriptome

      Bak, Søren, Morant, M., Ekstrøm, Claus Thorn, Rudemo, M. E. & Olsen, C. E., 2006, Statistics for gene and protein expression. p. 13 1 p.

      Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

    31. Published

      Lotus japonicus as a model system to study evolution and function of cyanogenic glucosides in plant-insect interactions

      Bak, Søren, Saito, S., Takos, A. M., Zagrobelny, M., Bjarnholt, Nanna, Jensen, N. B., Rook, F., Martin, C. R. & Møller, Birger Lindberg, 2009.

      Research output: Contribution to conference › Conference abstract for conference › Research

    32. Published

      Methods of modulating auxin production in plants

      Bak, Søren, Feldmann, K. A., Feyereisen, R. & Tax, F., 2006, Patent No. US 7.009.088 B1, 7 Mar 2006

      Research output: Patent

    33. Published

      Erratum: Cyanogenic glycosides: A case study for evolution and application of cytochromes P450 (Phytochemistry Reviews (2006) 5, (309-329) DOI: 10.1007/s11101-006-9033-1)

      Bak, Søren, Paquette, S. M., Morant, M., Morant, A. V., Saito, S., Bjarnholt, Nanna, Zagrobelny, M., Jørgensen, K., Osmani, S., Hamann, T., Simonsen, H. T., Pérez, R. S., Van Heeswijck, T. B., Jørgensen, Bodil & Møller, Birger Lindberg, 2008, In: Phytochemistry Reviews. 7, 1, p. 209 1 p.

      Research output: Contribution to journal › Comment/debate › Research › peer-review

    34. Published

      Cyanogenic- and nitrile glucosides in Lotus japonicus

      Bak, Søren, 2004.

      Research output: Contribution to conference › Conference abstract for conference › Research

    35. Published

      Cytochromes P450

      Bak, Søren, Beisson, F., Bishop, G., Hamberger, B. R., Höfer, R., Paquette, S. & Werck-Reichhart, D., 2011, The arabidopsis book. American Society of Plant Biologists, 56 p.

      Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

    36. Published

      Diversification of an ancient theme: hydroxynitrile glucosides

      Bjarnholt, Nanna, Rook, F., Motawie, Mohammed Saddik, Cornett, Claus, Jørgensen, C., Olsen, C. E., Jaroszewski, J. W., Bak, Søren & Møller, Birger Lindberg, 2008, In: Phytochemistry. 69, 7, p. 1507-1516 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    37. Published

      Diversification of an ancient theme: hydroxynitrile glucosides

      Bjarnholt, Nanna, Rook, F., Motawie, Mohammed Saddik, Cornett, Claus, Olsen, C. E., Jaroszewski, J. W., Bak, Søren & Møller, Birger Lindberg, 2008.

      Research output: Contribution to conference › Conference abstract for conference › Research

    38. Published

      Occurrence of rhodiocyanosides and related compounds in plants and implications for herbal medicine

      Bjarnholt, Nanna, Jessing, K., Refsgaard, K., Jørgensen, C., Bak, Søren, Brünner, N., Skov, P. S. & Møller, Birger Lindberg, 2006. 1 p.

      Research output: Contribution to conference › Conference abstract for conference › Research

    39. Published

      Occurrence of rhodiocyanosides and related compounds and implications for herbal medicine

      Bjarnholt, Nanna, Jessing, K., Refsgaard, K., Jørgensen, C., Bak, Søren, Brünner, N., Skov, P. S. & Møller, Birger Lindberg, 2005. 1 p.

      Research output: Contribution to conference › Poster › Research

    40. Published

      Are cyanogenic glucosides, rhodiocyanosides and other cyanoalk(en)yl glucosides found in cyanogenic plants produced by a single promiscuous multienzyme complex?

      Bjarnholt, Nanna, Jørgensen, C., Olsen, C. E., Bak, Søren & Møller, Birger Lindberg, 2006. 1 p.

      Research output: Contribution to conference › Poster › Research

    41. Published

      Are cyanogenic glucosides, rhodiocyanosides and other cyanoalk(en)yl glugosides found in cyanogenic plants produced by a single promiscuous multienzyme complex?

      Bjarnholt, Nanna, Jørgensen, C., Olsen, C. E., Bak, Søren & Møller, Birger Lindberg, 2007. 1 p.

      Research output: Contribution to conference › Poster › Research

    42. Published

      Are cyanogenic glucosides, rhodiocyanosides and other cyanoalk(en)yl glucosides found in cyanogenic plants produced by a single promiscuous multienzyme complex?

      Bjarnholt, Nanna, Jørgensen, C., Olsen, C. E., Bak, Søren & Møller, Birger Lindberg, 2006. 1 p.

      Research output: Contribution to conference › Conference abstract for conference › Research

    43. Published

      Recombinant human tumour necrosis factor increases cytosolic free calcium in murine fibroblasts and stimulates inositol phosphate formation in L-M and arachidonic acid release in 3T3 cells

      Bouchelouche, P. N., Bendtzen, K., Bak, Søren & Nielsen, Ole Haagen, 1990, In: Cellular Signalling. 2, 5, p. 479-87 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    44. Published

      Integrative analysis of metabolomics and transcriptomics data: a unified model framework to identify underlying system pathways

      Brink-Jensen, K., Bak, Søren, Jørgensen, Kirsten & Ekstrøm, Claus Thorn, 2013, In: P L o S One. 8, 9, 8 p., e72116.

      Research output: Contribution to journal › Journal article › Research › peer-review

    45. Published

      The genome sequence of Barbarea vulgaris facilitates the study of ecological biochemistry

      Byrne, S. L., Erthmann, P. Ø., Agerbirk, Niels, Bak, Søren, Hauser, T. P., Nagy, I., Paina, C. & Asp, T., 2017, In: Scientific Reports. 7, 14 p., 40728.

      Research output: Contribution to journal › Journal article › Research › peer-review

    46. Published

      Optimized expression and catalytic properties of a wheat obtusifoliol 14alfa-demethylase (CYP51) expressed in yeast: complementation of erg11/\ yeats mutants by plant CYP51

      Cabello-Hurtado, F., Taton, M., Forthoffer, N., Kahn, R. A., Bak, Søren, Rahier, A. & Werck-Reichhart, D., 1999, In: FEBS Journal. 262, p. 435-446 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    47. Published

      Pollen-feeding delays reproductive senescence and maintains toxicity of Heliconius erato

      Castro, E. C. P. D., McPherson, J., Jullian, G., Mattila, A. L. K., Bak, Søren, Montgomery, S. H. & Jiggins, C., 2023, bioRxiv, 18 p.

      Research output: Working paper › Preprint › Research

    48. Published

      Sequestration and functional diversification of cyanogenic glucosides in the life cycle of Heliconius melpomene

      Castro, É. C. P. D., Demirtas, R., Orteu, A., Olsen, C. E., Motawie, Mohammed Saddik, Cardoso, M. Z., Zagrobelny, M. & Bak, Søren, 2019, bioRxiv, 31 p.

      Research output: Working paper › Preprint › Research

    49. Published

      Phenotypic plasticity in chemical defence allows butterflies to diversify host use strategies

      Castro, É. C. P. D., Musgrove, J., Bak, Søren, McMillan, W. O. & Jiggins, C. D., 2020, bioRxiv, 14 p.

      Research output: Working paper › Preprint › Research

    50. Published

      The bifurcation of the cyanogenic glucoside and glucosinolate biosynthetic pathways

      Sørensen, Mette, Kannangara, R. M., Olsen, C. E., Blomstedt, C. K., Gleadow, R. M., Jørgensen, Kirsten, Bak, Søren, Motawie, Mohammed Saddik & Møller, Birger Lindberg, 2015, In: The Plant Journal. 84, 3, p. 558-573 16 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

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    ID: 4240264