Søren Bak
Professor
Introductory remarks on publicationslist
ResearcherID H-4404-2014
ORCID 0000-0003-4100-115X
- Published
ß-Glucosidases as detonators of plant chemical defense
Morant, A. V., Jørgensen, Kirsten, Jørgensen, C., Paquette, S. M., Sanchez Perez, R., Møller, Birger Lindberg & Bak, Søren, 2008, In: Phytochemistry. 69, 9, p. 1795-1813 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Volatiles from the burnet Moth Zygaena filipendulae (Lepidoptera) and Associated flowers, and their involvement in mating communication
Zagrobelny, Mika, Simonsen, H. T., Olsen, C. E., Bak, Søren & Møller, Birger Lindberg, 2015, In: Physiological Entomology. 40, 4, p. 284-295 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Visualizing metabolite distribution and enzymatic conversion in plant tissues by desorption electrospray ionization mass spectrometry imaging
Li, B., Baden, C. K., Hansen, N. K. K., Jørgensen, Kirsten, Kannangara, R. M., Bak, Søren, Takos, A. M., Rook, F., Hansen, S. H., Møller, Birger Lindberg, Janfelt, Christian & Bjarnholt, Nanna, 2013, In: Plant Journal. 74, 6, p. 1059-1071 74.Research output: Contribution to journal › Journal article › Research › peer-review
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Variation of chemical compounds in wild Heliconiini reveals ecological factors involved in the evolution of chemical defenses in mimetic butterflies
Sculfort, O., de Castro, E. C. P., Kozak, K. M., Bak, Søren, Elias, M., Nay, B. & Llaurens, V., 2020, In: Ecology and Evolution. 10, 5, p. 2677-2694 18 p.Research output: Contribution to journal › Review › Research › peer-review
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Utilization of ESTs from Cassava: Progress on Development of EST-SSR Markers and an Oligo DNA Microarray
Ingelbrecht, I. L., Jørgensen, Kirsten, Bak, Søren, Gorodkin, Jan, Raji, A., Winter, S., Lokko, Y., Gedil, M., Anderson, J. V. & Møller, Birger Lindberg, 2008.Research output: Contribution to conference › Conference abstract for conference › Research
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Use of within-array and dye swap replicates for expression analysis in spotted microarrays
Ekstrøm, Claus Thorn, Rudemo, M. E., Morant, M. & Bak, Søren, 2006. 1 p.Research output: Contribution to conference › Poster › Research
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Use of the cDNA microarray technology in the safety assesment of GM food plants
Kok, E. J., Kleter, G. A., Dijk, J. P. V., Nielsen, Hanne Bakkegaard, Bak, Søren, Hammerling, U., Mikalsen, A., Kärenlampi, S., Eriksen, F. D., Knudsen, I. & Pedersen, J., 2003, In: TemaNord2003. Nordic Council of Ministers. p. 5-84 78 p.Research output: Contribution to journal › Journal article › Research
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Use of global untargeted metabolite profiling to identify correlation between natural variation in the metabolome and plant insect resistance
Bak, Søren, Ekstrøm, Claus Thorn, Olsen, C. E., Nielsen, J. K., Rudemo, M. E. & Andersen, S. B., 2007. 1 p.Research output: Contribution to conference › Poster › Research
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Use of DNA microarrays for transcriptome analysis in plants
Bak, Søren, 2008.Research output: Contribution to conference › Conference abstract for conference › Research
- Published
Unravelling natural resistance mechanisms in plants towards herbivorous insects
Poulsen, V. K., Andersen, S. B., Ekstrøm, Claus Thorn, Nielsen, J. K., Olsen, C. E. & Bak, Søren, 2008.Research output: Contribution to conference › Conference abstract for conference › Research
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Unraveling the biosynthetic pathway of triterpenoid saponins in Barbarea vulgaris
Augustin, J. M., Poulsen, V. K., Andersen, S. B., Nielsen, J. K. & Bak, Søren, 2009. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research
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Unraveling the biosynthetic pathway of triterpenoid saponins in Barbarea vulgaris
Augustin, J. M., Poulsen, V. K., Andersen, S. B., Nielsen, J. K. & Bak, Søren, 2009. 1 p.Research output: Contribution to conference › Poster › Research
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UDP-glycosyltransferases from the UGT73C subfamily in Barbarea vulgaris catalyse Sapogenin 3-O-glucosylation in Saponin-mediated Insect resistance
Augustin, J. M., Drok, S., Shinoda, T., Sanmiya, K., Nielsen, J. K., Khakimov, Bekzod, Olsen, C. E., Hansen, E. H., Poulsen, V. K., Ekstrøm, Claus Thorn, Hauser, T. P. & Bak, Søren, 2012, In: Plant Physiology. 160, 4, p. 1881-1895 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Triterpene Messages from the EU-FP7 Project TriForC
Goossens, A., Osbourn, A., Michoux, F. & Bak, Søren, 2018, In: Trends in Plant Science. 23, 4, p. 273-276Research output: Contribution to journal › Editorial › Research › peer-review
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Transport of the cyanogenic glucoside dhurrin in sorghum bicolor
Ebert, S., Bak, Søren & Møller, Birger Lindberg, 2003.Research output: Contribution to conference › Conference abstract for conference › Research
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Transgenic tobacco and arabidopsis plants expressing the two multifunctional sorghum cytochrome P450 enzymes, CYP79A1 and CYP71E1, are cyanogenic and accumulate metabolites derived from intermediates in dhurrin biosynthesis
Bak, Søren, Olsen, C. E., Halkier, Barbara Ann & Møller, Birger Lindberg, 2000, In: Plant Physiology. 123, p. 1437-1448 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Transcriptomic and metabolomic characterization of rnt1-1, an Arabidopsis thaliana knockout in a metabolic branch point between primary and secondary metabolism
Morant, M., Ekstrøm, Claus Thorn, Olsen, C. E., Møller, Birger Lindberg, Rudemo, M. E. & Bak, Søren, 2006. 1 p.Research output: Contribution to conference › Poster › Research
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Transcriptomic and metabolomic characterization of rnt1-1, an Arabidopsis thaliana knockout in a metabolic branch point between primary and secondary metabolism
Morant, M., Ekstrøm, Claus Thorn, Olsen, C. E., Møller, Birger Lindberg, Rudemo, M. E. & Bak, Søren, 2007. 1 p.Research output: Contribution to conference › Poster › Research
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Transcriptional regulation of de novo biosynthesis of cyanogenic glucosides throughout the life-cycle of the burnet moth Zyagena filipendulae (Lepidoptera)
Fürstenberg-Hägg, J., Zagrobelny, Mika, Olsen, C. E., Jørgensen, Kirsten, Møller, Birger Lindberg & Bak, Søren, 2014, In: Insect Biochemistry and Molecular Biology. 49, p. 80-89 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Tjek på Biotek
Bak, Søren, Collinge, David B., Møller, Birger Lindberg, Holm, P. B., Haldrup, Anna, Sandøe, Peter & Poulsen, G. S., 2004, Tjek på Biotek - Elevhæfte til undervisning på gymnasiet. A. Haldrup og L. Bruun (ed.). København: Center for Skov, Landskab og Planlægning/Københavns Universitet, p. 1-60 60 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Communication
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The ¤presence of CYP79 homologues in glucosinolate-producing plants shows evolutionary conservation of the enzymes in the conversion of amino acid to aldoxime in the biosynthesis of cyanogenic glucosides and glucosinolates
Bak, Søren, Linde Nielsen, H. & Halkier, B. A., 1998, In: Plant Molecular Biology. 38, p. 725-734 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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The ¤involvement of two P450 enzymes, CYP83B1 and CYP83A1, in auxin homeostasis and glucosinolate biosynthesis
Bak, Søren & Feyereisen, R., 2001, In: Plant Physiology. 127, p. 108-118 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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The use of trimethylsilyl cyanide derivatization for robust and broad-spectrum high-throughput gas chromatography–mass spectrometry based metabolomics
Khakimov, Bekzod, Motawie, Mohammed Saddik, Bak, Søren & Engelsen, Søren Balling, 2013, In: Analytical and Bioanalytical Chemistry. 405, 28, p. 9193-9205 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
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The saponin bomb: a nucleolar-localized β-glucosidase hydrolyzes triterpene saponins in Medicago truncatula
Lacchini, E., Erffelinck, M., Mertens, J., Marcou, S., Molina-Hidalgo, F. J., Tzfadia, O., Venegas-Molina, J., Cárdenas, Pablo D., Pollier, J., Tava, A., Bak, Søren, Höfte, M. & Goossens, A., 2023, In: New Phytologist. 239, 2, 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
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The saponin bomb
Erffelinck, M., Mertens, J., Lacchini, E., Molina-Hidalgo, F. J., Tzfadia, O., Cárdenas, Pablo D., Pollier, J., Tava, A., Bak, Søren & Goossens, A., 2022, Research Square, 33 p.Research output: Working paper › Preprint
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The multiple strategies of an insect herbivore to overcome plant cyanogenic glucoside defence
Pentzold, S., Zagrobelny, Mika, Roelsgaard, P. S., Møller, Birger Lindberg & Bak, Søren, 2014, In: PLOS ONE. 9, 3, 8 p., e91337.Research output: Contribution to journal › Journal article › Research › peer-review
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The in vitro substrate regiospecificity of recombinant UGT85B1, the cyanohydrin glucosyltransferase from Sorghum bicolor
Hansen, K. S., Kristensen, C., Tattersall, D. B., Jones, P. R., Olsen, C. E., Bak, Søren & Møller, B. L., 2003, In: Phytochemistry. 64, 64, p. 143-151 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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The in vitro substrate regiospecificity of UGT85B1, the cyanohydrin glucosyltransferase from sorghum bicolor
Hansen, K. S., Kristensen, C., Tattersall, D. B., Jones, P. R., Olsen, C. E., Bak, Søren & Møller, Birger Lindberg, 2003, In: Phytochemistry. 64, p. 143-151 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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The impact of cytochromes P450 in evolution of cyanogenic glucosides in terrestrial plants
Bak, Søren, 2006, Programme and abstracts. Biochemical Society, 1 p.Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research
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The genome sequence of Barbarea vulgaris facilitates the study of ecological biochemistry
Byrne, S. L., Erthmann, P. Ø., Agerbirk, Niels, Bak, Søren, Hauser, T. P., Nagy, I., Paina, C. & Asp, T., 2017, In: Scientific Reports. 7, 14 p., 40728.Research output: Contribution to journal › Journal article › Research › peer-review
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The dynamics of cyanide defences in the life cycle of an aposematic butterfly: Biosynthesis versus sequestration
Pinheiro de Castro, É. C., Demirtas, R., Orteu, A., Olsen, C. E., Motawie, Mohammed Saddik, Zikan Cardoso, M., Zagrobelny, Mika & Bak, Søren, Jan 2020, In: Insect Biochemistry and Molecular Biology. 116, p. 1-9 103259.Research output: Contribution to journal › Journal article › Research › peer-review
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The cytochrome P450 CYP72A552 is key to production of hederagenin‐based saponins that mediate plant defense against herbivores
Liu, Q., Khakimov, Bekzod, Cárdenas, Pablo D., Cozzi, F., Olsen, C. E., Jensen, Karen Rysbjerg, Hauser, T. P. & Bak, Søren, May 2019, In: New Phytologist (Online). 222, 3, p. 1599-1609Research output: Contribution to journal › Journal article › Research › peer-review
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The cyanogenic glucoside composition of Zygaena filipendulae (Lepidoptera: Zygaenidae) as effected by feeding on wild-type and transgenic lotus populations with variable cyanogenic glucoside profiles
Zagrobelny, Mika, Bak, Søren, Ekstrøm, Claus Thorn, Olsen, C. E. & Møller, Birger Lindberg, 2007, In: Insect Biochemistry and Molecular Biology. 37, 1, p. 10-18 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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The cassava oxime metabolizing cytochrome P450 in cyanogenic glucoside biosynthesis
Morant, A. V., Morant, M., Jørgensen, Kirsten, Olsen, C. E., Bak, Søren & Møller, Birger Lindberg, 2007. 1 p.Research output: Contribution to conference › Poster › Research
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The cassava oxime metabolizing P450 in cyanogenic glucoside biosynthesis
Morant, A. V., Morant, M., Jørgensen, Kirsten, Olsen, C. E., Bak, Søren & Møller, Birger Lindberg, 2006. 1 p.Research output: Contribution to conference › Poster › Research
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The bifurcation of the cyanogenic glucoside and glucosinolate biosynthetic pathways
Sørensen, Mette, Kannangara, R. M., Olsen, C. E., Blomstedt, C. K., Gleadow, R. M., Jørgensen, Kirsten, Bak, Søren, Motawie, Mohammed Saddik & Møller, Birger Lindberg, 2015, In: The Plant Journal. 84, 3, p. 558-573 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
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The arms race between heliconiine butterflies and Passiflora plants - new insights on an ancient subject
Pinheiro de Castro, É. C., Zagrobelny, Mika, Cardoso, M. Z. & Bak, Søren, 2018, In: Biological Reviews. 93, 1, p. 555-573 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
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The TriForC database: a comprehensive up-to-date resource of plant triterpene biosynthesis
Miettinen, Karel, Inigo, S., Kreft, L., Pollier, J., De Bo, C., Botzki, A., Coppens, F., Bak, Søren & Goossens, A., 2018, In: Nucleic Acids Research. 46, D1, p. D586-D594 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The ß-glucosidases responsible for bioactivation of hydroxynitrile glucosides in Lotus japonicus
Morant, A. V., Bjarnholt, Nanna, Kragh, M. E., Kjærgaard, C. H., Jørgensen, Kirsten, Paquette, S. M., Piotrowski, M., Imberty, A., Olsen, C. E., Møller, Birger Lindberg & Bak, Søren, 2008, In: Plant Physiology. 147, 3, p. 1072-1091 20 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Systematic Approaches to Study Cytochrome P450 Genes in Arabidopsis thaliana
Xu, W., Budworth, P., Chen, W., Chang, H., Su, Z., Deyholos, K., Bak, Søren, Macas, J., Tax, F., VanEtten, H., Wang, X., Zhu, T. & Galbraith, D., 2002.Research output: Contribution to conference › Conference abstract for conference › Research
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Substrate specificity of plant UDP-dependent glycosyltransferases predicted from crystal structures and homology modeling
Osmani, S. A., Bak, Søren & Møller, Birger Lindberg, 2009, In: Phytochemistry. 70, 3, p. 325-347 23 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Spot shape modelling and saturated pixels in microarrays
Ekstrøm, Claus Thorn, Kristensen, C., Bak, Søren & Rudemo, M. E., 2003.Research output: Contribution to conference › Conference abstract for conference › Research
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Spot shape modelling and data transformations for microarrays
Ekstrøm, Claus Thorn, Bak, Søren, Kristensen, C. & Rudemo, M. E., 2004, In: Bioinformatics. 20, 14, p. 2270-2278 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Spatial separation of the cyanogenic β-glucosidase ZfBGD2 and cyanogenic glucosides in the haemolymph of Zygaena larvae facilitates cyanide release
Pentzold, S., Jensen, M. K., Matthes, A., Olsen, C. E., Petersen, Bent L, Clausen, Henrik, Møller, Birger Lindberg, Bak, Søren & Zagrobelny, Mika, 2017, In: Royal Society Open Science. 4, 13 p., 170262.Research output: Contribution to journal › Journal article › Research › peer-review
- E-pub ahead of print
Site-directed genotype screening for elimination of antinutritional saponins in quinoa seeds identifies TSARL1 as a master controller of saponin biosynthesis selectively in seeds
Trinh, Mai Duy Luu, Visintainer, Davide, Günther, Jan, Østerberg, J. T., Rodrigues da Fonseca, Rute Andreia, Fondevilla, S., Moog, Max William, Luo, Guangbin, Nørrevang, Anton Frisgaard, Crocoll, C., Nielsen, P. V., Jacobsen, S., Wendt, T., Bak, Søren, Lopez Marques, Rosa Laura & Palmgren, Michael, 2024, (E-pub ahead of print) In: Plant Biotechnology Journal. 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequestration, tissue distribution and developmental transmission of cyanogenic glucosides in a specialist insect herbivore
Zagrobelny, Mika, Olsen, C. E., Pentzold, S., Fürstenberg-Hägg, J., Jørgensen, Kirsten, Bak, Søren, Møller, Birger Lindberg & Motawie, Mohammed Saddik, 2014, In: Insect Biochemistry and Molecular Biology. 44, p. 44-53 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Sequestration and functional diversification of cyanogenic glucosides in the life cycle of Heliconius melpomene
Castro, É. C. P. D., Demirtas, R., Orteu, A., Olsen, C. E., Motawie, Mohammed Saddik, Cardoso, M. Z., Zagrobelny, Mika & Bak, Søren, 2019, bioRxiv, 31 p.Research output: Working paper › Preprint
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Sequestration and biosynthesis of cyanogenic glucosides in passion vine butterflies and consequences for the diversification of their host plants
Pinheiro de Castro, É. C., Zagrobelny, Mika, Zurano, J. P., Zikan Cardoso, M., Feyereisen, R. & Bak, Søren, 1 May 2019, In: Ecology and Evolution. 9, 9, p. 5079-5093Research output: Contribution to journal › Journal article › Research › peer-review
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Screening for triterpenoid saponins in plants using hyphenated analytical platforms
Khakimov, Bekzod, Tseng, L. H., Godejohann, M., Bak, Søren & Engelsen, Søren Balling, 2016, In: Molecules. 21, 12, 19 p., 1614.Research output: Contribution to journal › Journal article › Research › peer-review
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Response to Kutchan: genetic engineering, natural variation and substantial equivalence
Møller, Birger Lindberg & Bak, Søren, 2005, In: Trends in Biotechnology. 23, 8, p. 383-384 2 p.Research output: Contribution to journal › Journal article › Research
ID: 4240264
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5314
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Plant defense against insect herbivores
Research output: Contribution to journal › Review › Research › peer-review
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3232
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UDP-glycosyltransferases from the UGT73C subfamily in Barbarea vulgaris catalyse Sapogenin 3-O-glucosylation in Saponin-mediated Insect resistance
Research output: Contribution to journal › Journal article › Research › peer-review
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2116
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Chemical defense balanced by sequestration and de novo biosynthesis in a lepidopteran specialist
Research output: Contribution to journal › Journal article › Research › peer-review
Published