- 2021
- Published
Quantitative interactions: The disease outcome of Botrytis cinerea across the plant kingdom
Caseys, C., Shi, G., Soltis, N., Gwinner, R., Corwin, J., Atwell, S. & Kliebenstein, D. J., 2021, In: G3: Genes, Genomes, Genetics. 11, 8, 15 p., jkab175.Research output: Contribution to journal › Review › Research › peer-review
- Published
Root-type ferredoxin-NADP+ oxidoreductase isoforms in Arabidopsis thaliana: Expression patterns, location and stress responses
Grabsztunowicz, M., Rantala, M., Ivanauskaite, A., Blomster, T., Koskela, M. M., Vuorinen, K., Tyystjarvi, E., Burow, Meike, Overmyer, K., Mahonen, A. P. & Mulo, P., 2021, In: Plant, Cell and Environment. 44, 2, p. 548-558 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Scission of Glucosidic Bonds by a Lentinus similis Lytic Polysaccharide Monooxygenases Is Strictly Dependent on H2O2while the Oxidation of Saccharide Products Depends on O2
Brander, Søren, Tokin, Radina, Ipsen, J., Jensen, Poul Erik, Hernández-Rollán, C., Nørholm, M. H. H., Lo Leggio, Leila, Dupree, P. & Johansen, Katja Salomon, 2021, In: ACS Catalysis. 11, 22, p. 13848-13859Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Specialized metabolites and valuable molecules in crop and medicinal plants: The evolution of their use and strategies for their production
D’Amelia, V., Docimo, T., Crocoll, C. & Rigano, M. M., 2021, In: Genes. 12, 6, 20 p., 936.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stationary sieve element proteins
Sanden, Niels Christian Holm & Schulz, Alexander, 2021, In: Journal of Plant Physiology. 266, 10 p., 153511.Research output: Contribution to journal › Review › Research › peer-review
- Published
Sugar transporters enable a leaf beetle to accumulate plant defense compounds
Yang, Z. L., Nour-Eldin, Hussam Hassan, Hänniger, S., Reichelt, M., Crocoll, C., Seitz, F., Vogel, H. & Beran, F., 2021, In: Nature Communications. 12, 1, 12 p., 2658.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The GORKY glycoalkaloid transporter is indispensable for preventing tomato bitterness
Kazachkova, Y., Zemach, I., Panda, S., Bocobza, S., Vainer, A., Rogachev, I., Dong, Y., Ben-Dor, S., Veres, D., Kanstrup, Christa, Lambertz, S. K., Crocoll, C., Hu, Y., Shani, E., Michaeli, S., Nour-Eldin, Hussam Hassan, Zamir, D. & Aharoni, A., 2021, In: Nature Plants. 7, p. 468-480Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Hda1 histone deacetylase limits divergent non-coding transcription and restricts transcription initiation frequency
Gowthaman, U., Ivanov, M., Schwarz, Isabel Aimèe, Patel, H. P., Müller, N. A., Garcia Pichardo, Desire, Lenstra, T. L. & Marquardt, Sebastian, 2021, In: EMBO Journal. 40, 23, 16 p., 108903.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The biosynthesis of thymol, carvacrol, and thymohydroquinone in Lamiaceae proceeds via cytochrome P450s and a short-chain dehydrogenase
Krause, S. T., Liao, P., Crocoll, C., Boachon, B., Foerster, C., Leidecker, F., Wiese, N., Zhao, D., Wood, J. C., Buell, C. R., Gershenzon, J., Dudareva, N. & Degenhardt, J., 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 52, 10 p., e2110092118.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
TrancriptomeReconstructoR: data-driven annotation of complex transcriptomes
Ivanov, M., Sandelin, Albin Gustav & Marquardt, Sebastian, 2021, In: BMC Bioinformatics. 22, 15 p., 290.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
VC1 catalyses a key step in the biosynthesis of vicine in faba bean
Björnsdotter, E., Nadzieja, M., Chang, W., Escobar-Herrera, L., Mancinotti, Davide, Angra, D., Xia, Xinxing, Tacke, R., Khazaei, H., Crocoll, C., Vandenberg, A., Link, W., Stoddard, F. L., O'Sullivan, D. M., Stougaard, J., Schulman, A. H., Andersen, S. U. & Geu-Flores, Fernando, 2021, In: Nature Plants. 7, p. 923–931Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Winter fields antisense RNAs to kick off flowering
Jin, Yu & Marquardt, Sebastian, 2021, In: Genes and Development. 38, 11-12, p. 785-786 2 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2020
- Published
Biochemical evidence of both copper chelation and oxygenase activity at the histidine brace
Brander, Søren, Horvath, I., Ipsen, J. Ø., Peciulyte, A., Olsson, L., Hernández-rollán, C., Nørholm, M. H. H., Mossin, S., Lo Leggio, Leila, Probst, C., Thiele, D. J. & Johansen, Katja Salomon, 1 Dec 2020, In: Scientific Reports. 10, 1, 11 p., 16369.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The synergy between LPMOs and cellulases in enzymatic saccharification of cellulose is both enzyme- and substrate-dependent
Tokin, Radina, Ipsen, J. Ø., Westh, P. & Johansen, Katja Salomon, 1 Oct 2020, In: Biotechnology Letters. 42, 10, p. 1975-1984 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The γ-hydroxybutyric acid (GHB) analogue NCS-382 is a substrate for both monocarboxylate transporters subtypes 1 and 4
Thiesen, L., Belew, Zeinu Mussa, Griem-Krey, Nane, Pedersen, Stine Helene Falsig, Crocoll, C., Nour-Eldin, Hussam Hassan & Wellendorph, Petrine, 15 Feb 2020, In: European Journal of Pharmaceutical Sciences. 143, p. 1-9 105203.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metabolic engineering of Synechocystis sp. PCC 6803 for the production of aromatic amino acids and derived phenylpropanoids
Brey, L. F., Włodarczyk, A. J., Bang Thøfner, J. F., Burow, Meike, Crocoll, C., Nielsen, I., Zygadlo Nielsen, A. J. & Jensen, Poul Erik, Jan 2020, In: Metabolic Engineering. 57, p. 129-139Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A CRISPR way for accelerating improvement of food crops
Zhang, Yi, Pribil, Mathias, Palmgren, Michael & Gao, C., 2020, In: Nature Food. 1, 4, p. 200-205 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A G(enomic)P(ositioning)S(ystem) for Plant RNAPII Transcription
Leng, Xueyuan, Thomas, Quentin, Rasmussen, S. H. & Marquardt, Sebastian, 2020, In: Trends in Plant Science. 25, 8, p. 744-764Research output: Contribution to journal › Review › Research › peer-review
- Published
A flavin-dependent monooxygenase catalyzes the initial step in cyanogenic glycoside synthesis in ferns
Thodberg, S., Sørensen, Mette, Bellucci, M., Crocoll, C., Bendtsen, Amalie Kofoed, Nelson, D. R., Motawie, Mohammed Saddik, Møller, Birger Lindberg & Neilson, Elizabeth Heather Jakobsen, 2020, In: Communications Biology . 3, 11 p., 507.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Antimicrobial solid media for screening non‐sterile Arabidopsis thaliana seeds
Behrendorff, J., Borràs I Gas, G. & Pribil, Mathias, 2020, In: Physiologia Plantarum.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of Arabidopsis thaliana Promoter Bidirectionality and Antisense RNAs by Inactivation of Nuclear RNA Decay Pathways
Thieffry, A., Vigh, Maria Louisa, Lange, Jette Bornholdt, Ivanov, M., Brodersen, Peter & Sandelin, Albin Gustav, 2020, In: The Plant Cell. 32, 6, p. 1845-1867 23 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of Arabidopsis CYP79C1 and CYP79C2 by Glucosinolate Pathway Engineering in Nicotiana benthamiana Shows Substrate Specificity Toward a Range of Aliphatic and Aromatic Amino Acids
Wang, Cuiwei, Dissing, M. M., Agerbirk, Niels, Crocoll, C. & Halkier, Barbara Ann, 2020, In: Frontiers in Plant Science. 11, 13 p., 57.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Control of flowering in rice through synthetic microProteins
qmd783, qmd783, Ariza, J. G., Brambilla, V., Sun, B., Bhati, K. K., Fornara, F. & Wenkel, Stephan, 2020, In: Journal of Integrative Plant Biology. 62, 6, p. 730-736Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Copper toxicity affects indolic glucosinolates and gene expression of key enzymes for their biosynthesis in Chinese cabbage
Aghajanzadeh, T. A., Prajapati, D. H. & Burow, Meike, 2020, In: Archives of Agronomy and Soil Science. 66, 9, p. 1288-1301Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DNA Processing in the Context of Noncoding Transcription
Gowthaman, U., Garcia Pichardo, Desire, Jin, Yu, Schwarz, Isabel Aimèe & Marquardt, Sebastian, 2020, In: Trends in Biochemical Sciences. 45, 12, p. 1009-1021Research output: Contribution to journal › Journal article › Research › peer-review
- Published
De novo indol-3-ylmethyl glucosinolate biosynthesis, and not long-distance transport, contributes to defence of Arabidopsis against powdery mildew
Hunziker, P., Ghareeb, H., Wagenknecht, L., Crocoll, C., Halkier, Barbara Ann, Lipka, V. & Schulz, Alexander, 2020, In: Plant, Cell and Environment. 43, 6, p. 1571-1583 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Detection and characterization of a novel copper-dependent intermediate in a lytic polysaccharide monooxygenase
Singh, R. K., Möllers Blossom, B., Russo, D. A., Singh, R., Weihe, Høgni, Andersen, N. H., Tiwari, M. K., Jensen, Poul Erik, Felby, C. & Bjerrum, Morten Jannik, 2020, In: Chemistry - A European Journal. 26, 2, p. 454-463 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Differential partitioning of thiols and glucosinolates between shoot and root in Chinese cabbage upon excess zinc exposure
Aghajanzadeh, T. A., Prajapati, D. H. & Burow, Meike, 2020, In: Journal of Plant Physiology. 244, 9 p., 153088.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dissection of microProtein Signaling in Plant Development
Sun, B., 2020, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 179 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Diverse Allyl Glucosinolate Catabolites Independently Influence Root Growth and Development
Katz, E., Bagchi, R., Jeschke, V., Rasmussen, A. R. M., Hopper, A., Burow, Meike, Estelle, M. & Kliebenstein, D. J., 2020, In: Plant Physiology. 183, 3, p. 1376-1390 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dual sgRNA-based Targeted Deletion of Large Genomic Regions and Isolation of Heritable Cas9-free Mutants in Arabidopsis
Jin, Yu & Marquardt, Sebastian, 2020, In: Bio-protocol. 10, 20, 17 p., 3796.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Engineering mammalian cells to produce plant-specific N-glycosylation on proteins
Larsen, J. S., Karlsson, R. T. G., Tian, W., Schulz, M. A., Matthes, A., Clausen, Henrik, Petersen, Bent L & Yang, Zhang, 2020, In: Glycobiology. 30, 8, p. 528-538 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Epistatic Transcription Factor Networks Differentially Modulate Arabidopsis Growth and Defense
Li, B., Tang, M., Caseys, C., Nelson, A., Zhou, M., Zhou, X., Brady, S. M. & Kliebenstein, D. J., 2020, In: Genetics. 214, 2, p. 529-541 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
FRS7 and FRS12 recruit NINJA to regulate expression of glucosinolate biosynthesis genes
Fernández‐calvo, P., Iñigo, S., Glauser, G., Vanden Bossche, R., Tang, M., Li, B., De Clercq, R., Nagels Durand, A., Eeckhout, D., Gevaert, K., De Jaeger, G., Brady, S. M., Kliebenstein, D. J., Pauwels, L., Goossens, A. & Ritter, A., 2020, In: New Phytologist. 227, 4, p. 1124-1137Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Glucosinolate structural diversity, identification, chemical synthesis and metabolism in plants
Blažević, I., Montaut, S., Burčul, F., Olsen, C. E., Burow, Meike, Rollin, P. & Agerbirk, Niels, 2020, In: Phytochemistry. 169, 57 p., 112100.Research output: Contribution to journal › Review › Research › peer-review
- Published
Heterologous microProtein expression identifies LITTLE NINJA, a dominant regulator of jasmonic acid signaling
Hong, S., Sun, B., Straub, D., Blaakmeer, A., Mineri, L., Koch, J., Brinch-Pedersen, H., Holme, I. B., Burow, Meike, Jørgensen, Hans Jørgen Lyngs, Mar Alba, M. & Wenkel, Stephan, 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 42, p. 26197-26205 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
High-quality genome sequence of white lupin provides insight into soil exploration and seed quality
Hufnagel, B., Marques, A., Soriano, A., Marquès, L., Divol, F., Doumas, P., Sallet, E., Mancinotti, D., Carrere, S., Marande, W., Arribat, S., Keller, J., Huneau, C., Blein, T., Aimé, D., Laguerre, M., Taylor, J., Schubert, V., Nelson, M., Geu-Flores, F. & 8 others, , 2020, In: Nature Communications. 11, 1, 12 p., 492.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
IDDomainSpotter: Compositional bias reveals domains in long disordered protein regions—Insights from transcription factors
Millard, P. S., Bugge, K., Marabini, R., Boomsma, Wouter, Burow, Meike & Kragelund, Birthe Brandt, 2020, In: Protein Science. 29, 1, p. 169-183 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Identification and characterization of phlorizin transporter from Arabidopsis thaliana and its application for phlorizin production in Saccharomyces cerevisiae
Belew, Zeinu Mussa, Crocoll, C., Møller-Hansen, I., Naesby, M., Borodina, I. & Nour-Eldin, Hussam Hassan, 2020, bioRxiv, 28 p.Research output: Working paper › Preprint › Research
- Published
In Arabidopsis thaliana Substrate Recognition and Tissue- as Well as Plastid Type-Specific Expression Define the Roles of Distinct Small Subunits of Isopropylmalate Isomerase
Lächler, K., Clauss, K., Imhof, J., Crocoll, C., Schulz, Alexander, Halkier, Barbara Ann & Binder, S., 2020, In: Frontiers in Plant Science. 11, 18 p., 808.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Insights into the community structure and lifestyle of the fungal root endophytes of tomato by combining amplicon sequencing and isolation approaches with phytohormone profiling
Manzotti, A., Bergna, A., Burow, Meike, Jørgensen, Hans Jørgen Lyngs, Cernava, T., Berg, G., Collinge, David B. & Jensen, Birgit, 2020, In: FEMS Microbiology Ecology. 96, 5, 16 p., fiaa052.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Light affects tissue patterning of the hypocotyl in the shade-avoidance response
Botterweg-Paredes, E., Blaakmeer, A., Hong, S., Sun, B., Mineri, L., Kruusvee, Valdeko, Xie, Y., Straub, D., Menard, D., Pesquet, E. & Wenkel, Stephan, 2020, In: PLOS Genetics. 16, 3, 22 p., e1008678.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Matrix-Assisted Laser Desorption/Ionization-Mass Spectrometry Imaging of Metabolites during Sorghum Germination
Montini, L., Crocoll, C., Gleadow, R. M., Motawia, M. S., Janfelt, Christian & Bjarnholt, Nanna, 2020, In: Plant Physiology. 183, 3, p. 925-942 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mitochondrial dysfunction induced by variation in the non-coding genome – A proposed workflow to improve diagnostics
du Mee, D. J. M., Bak, M., Østergaard, Elsebet & Rasmussen, Lene Juel, 2020, In: Mitochondrion. 53, p. 255-259Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Native elongation transcript sequencing reveals temperature dependent dynamics of nascent RNAPII transcription in Arabidopsis
Kindgren, P., Ivanov, M. & Marquardt, Sebastian, 2020, In: Nucleic Acids Symposium Series. 48, 5, p. 2332-2347 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Organismal benefits of transcription speed control at gene boundaries
Leng, Xueyuan, Ivanov, M., Kindgren, P., Malik, I., Thieffry, A., Brodersen, Peter, Sandelin, Albin Gustav, Kaplan, C. D. & Marquardt, Sebastian, 2020, In: EMBO Reports. 21, 4, 16 p., e49315.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
PROTEIN PHOSPHATASE 2A-B'γ Controls Botrytis cinerea Resistance and Developmental Leaf Senescence
Durian, G., Jeschke, V., Rahikainen, M., Vuorinen, K., Gollan, P. J., Brosché, M., Salojärvi, J., Glawischnig, E., Winter, Z., Li, S., Noctor, G., Aro, E., Kangasjärvi, J., Overmyer, K., Burow, Meike & Kangasjärvi, S., 2020, In: Plant Physiology. 182, 2, p. 1161-1181 21 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Pathogen Genetic Control of Transcriptome Variation in the Arabidopsis thaliana – Botrytis cinerea Pathosystem
Soltis, N. E., Caseys, C., Zhang, W., Corwin, J. A., Atwell, S. & Kliebenstein, D. J., 2020, In: Genetics. 215, 1, p. 253-266Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Pectin Synthesis and Pollen Tube Growth in Arabidopsis Involves Three GAUT1 Golgi-Anchoring Proteins: GAUT5, GAUT6, and GAUT7
Lund, C. H., Stenbaek, A., Atmodjo, M. A., Rasmussen, R. E., Moller, I. E., Erstad, S. M., Biswal, A. K., Mohnen, D., Mravec, Jozef & Sakuragi, Y., 2020, In: Frontiers in Plant Science. 11, 15 p., 585774.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Photobiocatalysis by a Lytic Polysaccharide Monooxygenase Using Intermittent Illumination
Blossom, B. M., Russo, D. A., Singh, R. K., Van Oort, B., Keller, M. B., Simonsen, Tor Ivan, Perzon, A., Gamon, Luke Francis, Davies, Michael J., Cannella, D., Croce, R., Jensen, Poul Erik, Bjerrum, Morten Jannik & Felby, C., 2020, In: ACS Sustainable Chemistry & Engineering. 8, 25, p. 9301-9310 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Plastocyanin is the long-range electron carrier between photosystem II and photosystem I in plants
Höhner, R., Pribil, Mathias, Herbstová, M., Lopez, L. S., Kunz, H., Li, M., Wood, M., Svoboda, V., Puthiyaveetil, S., Leister, D. & Kirchhoff, H., 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 26, p. 15354-15362Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Secondary Structure of Chloroplast mRNAs In Vivo and In Vitro
Gawroński, P., Pałac, A. & Scharff, L. B., 2020, In: Plants. 9, 3, 13 p., 323.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synthetic Biology of Cannabinoids and Cannabinoid Glucosides in Nicotiana benthamiana and Saccharomyces cerevisiae
Gülck, T., Booth, J. K., Carvalho, Â., Khakimov, Bekzod, Crocoll, C., Motawie, Mohammed Saddik, Møller, Birger Lindberg, Bohlmann, J. & Gallage, N. J., 2020, In: Journal of Natural Products. 83, 10, p. 2877-2893 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synthetic Protein Scaffolding at Biological Membranes
Behrendorff, J. B. Y. H., Borràs I Gas, G. & Pribil, Mathias, 2020, In: Trends in Biotechnology. 38, 4, p. 432-446Research output: Contribution to journal › Review › Research › peer-review
- Published
Tenuazonic acid from Stemphylium loti inhibits the plant plasma membrane H+‐ATPase by a mechanism involving the C‐terminal regulatory domain
Bjørk, Peter Klemmed, Rasmussen, S. A., Gjetting, S. K., Havshøi, N. W., Petersen, T. I., Ipsen, J. Ø., Larsen, T. O. & Fuglsang, Anja Thoe, 2020, In: New Phytologist. 226, 3, p. 770-784Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transcript isoform sequencing reveals widespread promoter-proximal transcriptional termination in Arabidopsis
Thomas, Quentin, Ard, R., Liu, J., Li, B., Wang, J., Pelechano, V. & Marquardt, Sebastian, 2020, In: Nature Communications. 11, 1, p. 1-15Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transforming yeast peroxisomes into microfactories for the efficient production of high-value isoprenoids
hmq634, hmq634, Wajn, William Thomas, Liu, Y., Ignea, C. & Kampranis, Sotirios, 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 50, p. 31789-31799 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Using networks to identify and interpret natural variation
Kliebenstein, D. J., 2020, In: Current Opinion in Plant Biology. 54, p. 122-126 5 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
cDNA library screening to identify interacting proteins of Golgi-localized type II membrane proteins
Lund, C. H., Bromley, J. R., Lopez Marques, Rosa Laura & Sakuragi, Y., 2020, 15 p. (bioRxiv).Research output: Working paper › Preprint › Research
- Published
mGWAS Uncovers Gln-Glucosinolate Seed-Specific Interaction and its Role in Metabolic Homeostasis
Slaten, M. L., Yobi, A., Bagaza, C., Chan, Y. O., Shrestha, V., Holden, S., Katz, E., Kanstrup, Christa, Lipka, A. E., Kliebenstein, D. J., Nour-Eldin, Hussam Hassan & Angelovici, R., 2020, In: Plant Physiology. 183, 2, p. 483-500 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2019
- Published
Ultrastructural modeling of small angle scattering from photosynthetic membranes
Jakubauskas, D., Kowalewska, Ł., Sokolova, A. V., Garvey, C. J., Mortensen, Kell, Jensen, Poul Erik & Kirkensgaard, Jacob Judas Kain, 1 Dec 2019, In: Scientific Reports. 9, 13 p., 19405.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Role of Phosphorylation Dynamics of CURVATURE THYLAKOID 1B in Plant Thylakoid Membranes
Trotta, A., Bajwa, A. A., Mancini, I., Paakkarinen, V., Pribil, Mathias & Aro, E. M., Dec 2019, In: Plant Physiology. 181, 4, p. 1615-1631Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An Optimized Screen Reduces the Number of GA Transporters and Provides Insights Into Nitrate Transporter 1/Peptide Transporter Family Substrate Determinants
Wulff, N., Ernst, H. A., Jørgensen, M. E., Lambertz, S., Maierhofer, T., Belew, Zeinu Mussa, Crocoll, C., Motawie, Mohammed Saddik, Geiger, D., Jørgensen, Flemming Steen, Mirza, Osman Asghar & Nour-Eldin, Hussam Hassan, 3 Oct 2019, In: Frontiers in Plant Science. 10, 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Engineering of plastids to optimize the production of high-value metabolites and proteins
Jensen, Poul Erik & Scharff, L. B., Oct 2019, In: Current Opinion in Biotechnology. 59, p. 8-15 8 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Defining optimal electron transfer partners for light-driven cytochrome P450 reactions
Mellor, Silas Busck, Vinde, M. H., Nielsen, A. Z., Hanke, G. T., Abdiaziz, K., Roessler, M. M., Burow, Meike, Motawie, Mohammed Saddik, Møller, Birger Lindberg & Jensen, Poul Erik, 1 Sep 2019, In: Metabolic Engineering. 55, p. 33-43Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Identification and characterisation of two high-affinity glucose transporters from the spoilage yeast Brettanomyces bruxellensis
Tiukova, I. A., Møller-Hansen, I., Belew, Zeinu Mussa, Darbani, B., Boles, E., Nour-Eldin, Hussam Hassan, Linder, T., Nielsen, J. & Borodina, I., 1 Sep 2019, In: FEMS Microbiology Letters. 366, 17, p. 1-9 fnz222.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Metabolic changes and increased levels of bioactive compounds in white radish (Raphanus sativus L. Cv. 01) sprouts elicited by oligochitosan
Rakpenthai, A., Khaksar, G., Burow, Meike, Olsen, C. E. & Sirikantaramas, S., 19 Aug 2019, In: Agronomy. 9, 8, p. 1-14 467.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Arabidopsis glucosinolate storage cells transform into phloem fibres at late stages of development
Hunziker, P., Halkier, Barbara Ann & Schulz, Alexander, Aug 2019, In: Journal of Experimental Botany. 70, 16, p. 4305–4317Research output: Contribution to journal › Journal article › Research › peer-review
- Published
De novo production of benzyl glucosinolate in Escherichia coli
Petersen, A., Crocoll, C. & Halkier, Barbara Ann, 1 Jul 2019, In: Metabolic Engineering. 54, p. 24-34Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Changing substrate specificity and iteration of amino acid chain elongation in glucosinolate biosynthesis through targeted mutagenesis of Arabidopsis methylthioalkylmalate synthase1
Petersen, A., Gram Hansen, L., Mirza, N., Crocoll, C., Mirza, Osman Asghar & Halkier, Barbara Ann, Jul 2019, In: Bioscience Reports. 39, p. 1-15 BSR20190446.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Identification of genes involved in shea butter biosynthesis from Vitellaria paradoxa fruits through transcriptomics and functional heterologous expression
Wei, Y., Ji, B., Siewers, V., Xu, Deyang, Halkier, Barbara Ann & Nielsen, J., May 2019, In: Applied Microbiology and Biotechnology. 103, 9, p. 3727–3736Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The cytochrome P450 CYP72A552 is key to production of hederagenin‐based saponins that mediate plant defense against herbivores
Liu, Q., Khakimov, Bekzod, Cárdenas, Pablo D., Cozzi, F., Olsen, C. E., Jensen, Karen Rysbjerg, Hauser, T. P. & Bak, Søren, May 2019, In: New Phytologist (Online). 222, 3, p. 1599-1609Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Production of polyhydroxybutyrate in wood-ljungdahl microorganisms
Tappel, R., Behrendorff, J. B. Y. H., Koepke, M., Marcellin, E., Lemgruber, R. D. S. P., Valgepea, K. & Nielsen, L. K., 25 Apr 2019, IPC No. C12P7/625, Lanzatech, Inc., Patent No. US20190119706A1, Priority date 4 Oct 2017, Priority No. US201762568127PResearch output: Patent
- Published
Membrane-Bound Protein Scaffolding in Diverse Hosts Using Thylakoid Protein CURT1A
Behrendorff, J. B. Y. H., Sandoval-Ibañez, O. A., Sharma, A. & Pribil, Mathias, 19 Apr 2019, In: A C S Synthetic Biology. 8, 4, p. 611-620Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The P5A ATPase Spf1p is stimulated by phosphatidylinositol 4-phosphate and influences cellular sterol homeostasis
Sørensen, D. M., Holen, H. W., Pedersen, J. T., Martens, Helle Jakobe, Silvestro, D., Stanchev, L. D., Costa, S. R., Pomorski, Thomas Guenther, Lopez Marques, Rosa Laura & Palmgren, Michael, 15 Apr 2019, In: Molecular Biology of the Cell. 30, 9, p. 1069-1084Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deletion of biosynthetic genes, specific SNP patterns and differences in transcript accumulation cause variation in hydroxynitrile glucoside content in barley cultivars
Ehlert, M., Jagd, L. M., Braumann, I., Dockter, C., Crocoll, C., Motawie, Mohammed Saddik, Møller, Birger Lindberg & Lyngkjær, M. F., 5 Apr 2019, In: Scientific Reports. 9, p. 1-10 5730.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An Arabidopsis TIR-Lectin Two-Domain Protein Confers Defense Properties against Tetranychus urticae
Santamaría, M. E., Martínez, M., Arnaiz, A., Rioja, C., Burow, Meike, Grbic, V. & Díaza, I., 1 Apr 2019, In: Plant Physiology. 179, 4, p. 1298-1314Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A force awakens: exploiting solar energy beyond photosynthesis
Russo, D. A., Zedler, J. A. Z. & Jensen, Poul Erik, 1 Mar 2019, In: Journal of Experimental Botany. 70, 6, p. 1703–1710Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Quantification and Localization of Formylated Phloroglucinol Compounds (FPCs) in Eucalyptus Species
Santos, B. M. D., Zibrandtsen, J. F. S., Gunbilig, D., Sørensen, Mette, Cozzi, F., Boughton, B. A., Heskes, A. M. & Neilson, Elizabeth Heather Jakobsen, 26 Feb 2019, In: Frontiers in Plant Science. 10, p. 1-14 186.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transcription-driven chromatin repression of Intragenic transcription start sites
Nielsen, M., Ard, R., Leng, Xueyuan, Ivanov, M., Kindgren, P. R., Pelechano, V. & Marquardt, Sebastian, 1 Feb 2019, In: PLOS Genetics. 15, 2, p. 1-33 e1007969.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Secretion of Acetylxylan Esterase From Chlamydomonas reinhardtii Enables Utilization of Lignocellulosic Biomass as a Carbon Source
Ramos-Martinez, E. M., Fimognari, L., Rasmussen, M. K. & Sakuragi, Y., Feb 2019, In: Frontiers in Bioengineering and Biotechnology. 7, FEB, p. 1-9 35.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An Optimized Screen Reduces the Number of GA Transporters and provides Insights into NPF Substrate Determinants
Wulff, N., Ernst, H. A., Jørgensen, M. E., Lambertz, S., Maierhofer, T., Belew, Zeinu Mussa, Crocoll, C., Motawia, M. S., Geiger, D., Jørgensen, Flemming Steen, Mirza, Osman Asghar & Nour-Eldin, Hussam Hassan, 2019, bioRxiv.Research output: Working paper › Preprint › Research
- Published
Anthocyanin elicitation for bio-sustainable colourant production in carrot
Barba-Espın, G., Lütken, Henrik Vlk, Glied, S., Crocoll, C., Joernsgaard, B. & Müller, Renate, 2019, In: Acta Horticulturae. 1242, p. 87-92Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of Top Leader Elongation in Nordmann Fir (Abies nordmanniana)
Martens, Helle Jakobe, Sorensen, S., Burow, Meike & Veierskov, Bjarke, 2019, In: Journal of Plant Growth Regulation. 38, 4, p. 1354-1361Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Coordination of Glucosinolate Biosynthesis and Turnover Under Different Nutrient Conditions
Jeschke, V., Weber, K., Moore, S. S. & Burow, Meike, 2019, In: Frontiers in Plant Science. 10, p. 1-17 1560.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Evolution in regulatory networks coordinating development and defense chemistry
Weber, K., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Expression and secretion of a lytic polysaccharide monooxygenase by a fast-growing cyanobacterium
Russo, D. A., Zedler, J. A. Z., Wittmann, D. N., Möllers, B., Singh, R. K., Batth, Tanveer Singh, van Oort, B., Olsen, Jesper Velgaard, Bjerrum, Morten Jannik & Jensen, Poul Erik, 2019, In: Biotechnology for Biofuels. 12, 1, 13 p., 74.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
GTR-Mediated Radial Import Directs Accumulation of Defensive Glucosinolates to Sulfur-Rich Cells in the Phloem Cap of Arabidopsis Inflorescence Stem
Xu, Deyang, Hunziker, P., Koroleva, O., Blennow, Andreas, Crocoll, C., Schulz, Alexander, Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2019, In: Molecular Plant. 12, 11, p. 1474-1484Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Generation of microalga Chlamydomonas reinhardtii expressing shrimp antiviral dsRNA without supplementation of antibiotics
Charoonnart, P., Worakajit, N., Zedler, J. A. Z., Meetam, M., Robinson, C. & Saksmerprome, V., 2019, In: Scientific Reports. 9, p. 1-8 3164.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Glucosinolate Production in Heterologous Hosts: Choosing the right chassis
Petersen, A., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Growth under high light and elevated temperature affects metabolic responses and accumulation of health-promoting metabolites in kale varieties
Alegre, S., Pascual, J., Trotta, A., Gollan, P. J., Yang, W., Yang, B., Aro, E., Burow, Meike & Kangasjärvi, S., 2019, Cold Spring Harbor Laboratory, 51 p. (bioRxiv).Research output: Working paper › Preprint › Research
- Published
Identification and heterologous expression of biosynthetic genes for glucosinolate production
Wang, Cuiwei, 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 165 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Interactions of Tomato and Botrytis cinerea Genetic Diversity: Parsing the Contributions of Host Differentiation, Domestication, and Pathogen Variation
Soltis, N. E., Atwell, S., Shi, G., Fordyce, R., Gwinner, R., Gao, D., Shafi, A. & Kliebenstein, D. J., 2019, In: Plant Cell. 31, 2, p. 502-519Research output: Contribution to journal › Journal article › Research › peer-review
- Published
K+ and Cl− channels/transporters independently fine-tune photosynthesis in plants
Dukic, E., Herdean, A., Cheregi, O., Sharma, A., Nziengui, H., Dmitruk, D., Solymosi, K., Pribil, Mathias & Spetea, C., 2019, In: Scientific Reports. 9, p. 1-12 8639.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metabolic engineering of cyanobacteria for the production of aromatic compounds
Furelos Brey, L. M., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Metaproteomics of Freshwater Microbial Communities
Russo, D. A., Couto, N., Beckerman, A. P. & Pandhal, J., 2019, Mass Spectrometry of Proteins. Springer, Vol. 1977. p. 145-155 11 p. (Methods in molecular biology (Clifton, N.J.)).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Plant Networks as Traits and Hypotheses: Moving Beyond Description
Marshall-Colon, A. & Kliebenstein, D. J., 2019, In: Trends in Plant Science. 24, 9, p. 840-852Research output: Contribution to journal › Review › Research › peer-review
- Published
Plant-necrotroph co-transcriptome networks illuminate a metabolic battlefield
Zhang, W., Corwin, J. A., Copeland, D. H., Feusier, J., Eshbaugh, R., Cook, D. E., Atwell, S. & Kliebenstein, D. J., 2019, In: eLife. 8, e44279.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Questionomics: Using Big Data to Ask and Answer Big Questions
Kliebenstein, D. J., 2019, In: Plant Cell. 31, 7, p. 1404-1405Research output: Contribution to journal › Editorial › Research
- Published
R2R3 MYB Transcription Factors - Functions outside the DNA-Binding Domain
Millard, P. S., Kragelund, Birthe Brandt & Burow, Meike, 2019, In: Trends in Plant Science. 24, 10, p. 934-946Research output: Contribution to journal › Review › Research › peer-review
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Fusarium graminearum and its interactions with cereal heads: studies in the proteomics era
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Proteomic changes and endophytic micromycota during storage of organically and conventionally grown carrots
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