Section for Molecular Plant Biology

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  1. 2016
  2. Published

    Analysis and quantification of glucosinolates

    Crocoll, C., Halkier, Barbara Ann & Burow, Meike, 2016, In: Current Protocols in Plant Biology. 1, p. 385-409 25 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Arabinan: Biosynthesis and a Role in Host-Pathogen Interactions

    Stranne, M. & Sakuragi, Y., 2016, Plant Pathogen Resistance Biotechnology. Collinge, D. B. (ed.). Wiley-Blackwell, p. 91-107 17 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  4. Published

    Characterization of a dynamic metabolon producing the defense compound dhurrin in sorghum

    Laursen, Tomas, Borch-Jensen, J., Baden, C. K., Bavishi, K., Torta, F., Martens, Helle Jakobe, Silvestro, D., Hatzakis, Nikos, Wenk, M. R., Dafforn, T. R., Olsen, C. E., Motawie, Mohammed Saddik, Hamberger, B. R., Møller, Birger Lindberg & Bassard, J. A., 2016, In: Science (New York, N.Y.). 354, 6314, p. 890-893 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Characterization of methylsulfinylalkyl glucosinolate specific polyclonal antibodies

    Mirza, N. M. A., Schulz, Alexander & Halkier, Barbara Ann, 2016, In: Journal of Plant Biochemistry and Biotechnology. 25, 4, p. 433-436 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Chloroplast Redox Poise: The Role of Plastoquinone Pool and Redox-Sensitive Proteins

    Steccanella, V., 2016, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 126 p.

    Research output: Book/Report › Ph.D. thesis › Research

  7. Published

    Collection of apoplastic fluids from Arabidopsis thaliana leaves

    Madsen, S. R., Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2016, Biotechnology of plant secondary metabolism: methods and protocols. Springer, p. 35-42 8 p. (Methods in Molecular Biology, Vol. 1405).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  8. Published

    Complex environments interact with plant development to shape glucosinolate profiles

    Burow, Meike, 2016, How plants communicate with their biotic environment. Becard, G. (ed.). Elsevier, p. 15-30 16 p. (Advances in Botanical Research, Vol. 82).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  9. Published

    Comprehensive proteomic analysis of the wheat pathogenic fungus Zymoseptoria tritici

    Yang, F. & Yin, Q., 2016, In: Proteomics. 16, 1, p. 98-101 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Cyanobacteria as a Platform for the High-Value Chemicals Production

    Wlodarczyk, A. J., 2016, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 127 p.

    Research output: Book/Report › Ph.D. thesis › Research

  11. Published

    Domesticating deadly carrots: Predicting the biosynthetic pathway of thapsigargins for the treatment of solid tumors

    Martinez, K. A., Simonsen, H. T., Rønsted, Nina, Andersen, T. B., Barnes, Christopher James, Boughton, B. & Cozzi, F., 2016, In: Planta Medica. 81, S 01, p. S1-S381

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Engineering of methionine chain elongation part of glucoraphanin pathway in E. coli

    Mirza, N. M. A., Crocoll, C., Olsen, C. E. & Halkier, Barbara Ann, 2016, In: Metabolic Engineering. 35, p. 31-37 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Expansive phenotypic landscape of Botrytis cinerea shows differential contribution of genetic diversity and plasticity

    Corwin, J. A., Subedy, A., Eshbaugh, R. & Kliebenstein, D. J., 2016, In: Molecular Plant - Microbe Interactions. 29, 4, p. 287-298 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Extending the biosynthetic repertoires of cyanobacteria and chloroplasts

    Nielsen, A. J. Z., Mellor, Silas Busck, Vavitsas, K., Wlodarczyk, A. J., Gnanasekaran, Thiyagarajan, Perestrello Ramos H de Jesus, M., King, B. C., Bakowski, K. & Jensen, Poul Erik, 2016, In: Plant Journal. 87, 1, p. 87-102 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    False idolatry of the mythical growth versus immunity tradeoff in molecular systems plant pathology

    Kliebenstein, D. J., 2016, In: Physiological and Molecular Plant Pathology. 95, p. 55-59 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Functional expression and characterization of plant ABC transporters in Xenopus laevis oocytes for transport engineering purposes

    Xu, Deyang, Veres, D., Belew, Zeinu Mussa, Olsen, C. E., Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2016, Synthetic biology and metabolic engineering in plants and microbes : Part B: Plant metabolism. p. 207-224 8 p. (Methods in Enzymology, Vol. 576).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  17. Published

    Fusion of ferredoxin and cytochrome P450 enables direct light-driven biosynthesis

    Mellor, Silas Busck, Nielsen, A. J. Z., Burow, Meike, Motawie, Mohammed Saddik, Jakubauskas, D., Møller, Birger Lindberg & Jensen, Poul Erik, 2016, In: ACS chemical biology. 11, 7, p. 1862-1869 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    General introduction to glucosinolates

    Halkier, Barbara Ann, 2016, Advances in botanical research. Elsevier, Vol. 80. p. 1-14 14 p. (Advances in Botanical Research).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  19. Published

    Genome wide association mapping in Arabidopsis thaliana identifies novel genes involved in linking allyl glucosinolate to altered biomass and defense

    Francisco, M., Joseph, B., Caligagan, H., Li, B., Corwin, Lin, C., Kerwin, R., Burow, Meike & Kliebenstein, D. J., 2016, In: Frontiers in Plant Science. 7, 13 p., 1010.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Glucosinolate diversity within a phylogenetic framework of the tribe Cardamineae (Brassicaceae) unraveled with HPLC-MS/MS and NMR-based analytical distinction of 70 desulfoglucosinolates

    Olsen, C. E., Huang, X., Hansen, Cecilie Ida Cetti, Cipollini, D., Ørgaard, Marian, Matthes, A., Geu-Flores, Fernando, Koch, M. A. & Agerbirk, Niels, 2016, In: Phytochemistry. 132, p. 33-56 24 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    High throughput screening of starch structures using carbohydrate microarrays

    Tanackovic, V., Rydahl, M. G., Pedersen, H. L., Motawie, Mohammed Saddik, Shaik, S. S., Mikkelsen, M. D., Jensen, S. L., Fangel, J. U., Willats, W. G. T. & Blennow, Andreas, 2016, In: Scientific Reports. 6, 9 p., 30551.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Improving Delivery of Photosynthetic Reducing Power to Cytochrome P450s

    Mellor, Silas Busck, 2016, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 205 p.

    Research output: Book/Report › Ph.D. thesis › Research

  23. Published

    Improving analytical methods for protein-protein interaction through implementation of chemically inducible dimerization

    Andersen, T. G., Kjeldgaard-Nintemann, Sebastian J, Marek, M., Halkier, Barbara Ann, Schulz, Alexander & Burow, Meike, 2016, In: Scientific Reports. 6, 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Isolate dependency of Brassica rapa resistance QTLs to Botrytis cinerea

    Zhang, W., Kwon, S., Chen, F. & Kliebenstein, D. J., 2016, In: Frontiers in Plant Science. 7, 13 p., 161.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Levanase from Bacillus subtilis hydrolyses β-2,6 fructosyl bonds in bacterial levans and in grass fructans

    Jensen, S. L., Diemer, M. B., Lundmark, M. T., Larsen, F. H., Blennow, Andreas, Mogensen, Helle Kildal & Nielsen, T. H., 2016, In: International Journal of Biological Macromolecules. 85, p. 514-521 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Light-driven oxidation of polysaccharides by photosynthetic pigments and a metalloenzyme

    Cannella, D., Möllers, K. B., Frigaard, Niels-Ulrik, Jensen, Poul Erik, Bjerrum, Morten Jannik, Johansen, Katja Salomon & Felby, C., 2016, In: Nature Communications. 7, 11134.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Manganese deficiency in plants: the impact on photosystem II

    Schmidt, Sidsel Birkelund, Jensen, Poul Erik & Husted, Søren, 2016, In: Trends in Plant Science. 21, 7, p. 622-632 11 p.

    Research output: Contribution to journal › Review › Research › peer-review

  28. Published

    Metabolic engineering of light-driven cytochrome P450 dependent pathways into Synechocystis sp. PCC 6803

    Wlodarczyk, A. J., Gnanasekaran, Thiyagarajan, Nielsen, A. J. Z., Nokolunga, N., Mellor, Silas Busck, Manja, L., Frederik Bang Thøfner, J., Olsen, C. E., Motawie, Mohammed Saddik, Burow, Meike, Pribil, Mathias, Feussner, I., Møller, Birger Lindberg & Jensen, Poul Erik, 2016, In: Metabolic Engineering. 33, p. 1-11 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Molecular mechanisms governing differential robustness of development and environmental responses in plants

    Lachowiec, J., Queitsch, C. & Kliebenstein, D. J., 2016, In: Annals of Botany. 117, 5, p. 795-809 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Nonlinear selection and a blend of convergent, divergent and parallel evolution shapes natural variation in glucosinolates

    Kliebenstein, D. J. & Cacho, N. I., 2016, Advances in botanical research. Elsevier, Vol. 80. p. 31-55 25 p. (Advances in Botanical Research).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  31. Published

    Nuclear Engineering of Microalgae for High Yield Secretion of Recombinant Proteins

    Ramos Martinez, E. M., 2016, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 189 p.

    Research output: Book/Report › Ph.D. thesis › Research

  32. Published

    Observability of plant metabolic networks is reflected in the correlation of metabolic profiles

    Schwahn, K., Küken, A., Kliebenstein, D. J., Fernie, A. R. & Nikoloski, Z., 2016, In: Plant Physiology. 172, 2, p. 1324-1333 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Optimization of engineered production of the glucoraphanin precursor dihomomethionine in Nicotiana benthamiana

    Crocoll, C., Mirza, N. M. A., Reichelt, M., Gershenzon, J. & Halkier, Barbara Ann, 2016, In: Frontiers in Bioengineering and Biotechnology. 4, 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Oxidation and cyclization of Casbene in the biosynthesis of Euphorbia factors from mature seeds of Euphorbia lathyris L

    Luo, Dan, Callari, R., Hamberger, B., Wubshet, S. G., Nielsen, M. T., Andersen-Ranberg, Johan, Hallström, B. M., Cozzi, F., Heider, H., Møller, Birger Lindberg, Stærk, Dan & Hamberger, B. R., 2016, In: Proceedings of the National Academy of Sciences of the United States of America. 113, 34, p. E5082-E5089 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Phosphorylation at serine 52 and 635 does not alter the transport properties of glucosinolate transporter AtGTR1

    Jørgensen, M. E., Olsen, C. E., Halkier, Barbara Ann & Nour-Eldin, Hussam Hassan, 2016, In: Plant Signalling & Behavior. 11, 2, 6 p., e1071751.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Photosystem II functionality in barley responds dynamically to changes in leaf manganese status

    Schmidt, Sidsel Birkelund, Powikrowska, M., Krogholm, K. S., Naumann-Busch, B., Schjoerring, Jan K., Husted, Søren, Jensen, Poul Erik & Pedas, P. R., 2016, In: Frontiers in Plant Science. 7, 12 p., 1772.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Proteomic characterization of golgi membranes enriched from Arabidopsis suspension cell cultures

    Hansen, S. F., Ebert, B., Rautengarten, C. & Heazlewood, J. L., 2016, The golgi complex: methods and protocols. Brown, W. J. (ed.). Springer, p. 91-109 19 p. (Methods in Molecular Biology, Vol. 1496).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  38. Published

    Refactoring the six-gene photosystem II core in the chloroplast of the green algae Chlamydomonas reinhardtii

    Gimpel, J. A., Nour-Eldin, Hussam Hassan, Scranton, M. A., Li, D. & Mayfield, S. P., 2016, In: A C S Synthetic Biology. 5, 7, p. 589-596 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Retrograde signaling: organelles go networking

    Kleine, T. & Leister, D. M., 2016, In: BBA Bioenergetics. 1857, 8, p. 1313-1325 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Sinapic acid as inhibitor of the SOS response in Eschericha coli induced by ciprofloxacin

    Nascimento da Silva, L. C., Madsen, S. R., Crocoll, C., Halkier, Barbara Ann & Løbner-Olesen, A., 2016, In: Planta Medica. 82, S 01, 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  41. Published

    The Arabidopsis NPF3 protein is a GA transporter

    Tal, I., Zhang, Y., Jørgensen, M. E., Pisanty, O., Barbosa, I. C. R., Zourelidou, M., Regnault, T., Crocoll, C., Olsen, C. E., Weinstain, R., Schwechheimer, C., Halkier, Barbara Ann, Nour-Eldin, Hussam Hassan, Estelle, M. & Shani, E., 2016, In: Nature Communications. 7, 20 p., 11486.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    The Role of Pectin Acetylation in the Organization of Plant Cell Walls

    Fimognari, L., 2016, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  43. Published

    The antimycin A-sensitive pathway of cyclic electron flow: from 1963 to 2015

    Labs, M., Rühle, T. & Leister, D. M., 2016, In: Photosynthesis Research. 129, 3, p. 231-238 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    The biosynthetic gene cluster for the cyanogenic glucoside dhurrin in Sorghum bicolor contains its co-expressed vacuolar MATE transporter

    Darbani Shirvanehdeh, B., Motawie, Mohammed Saddik, Olsen, C. E., Nour-Eldin, Hussam Hassan, Møller, Birger Lindberg & Rook, F., 2016, In: Scientific Reports. 6, 8 p., 37079.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    The decision to germinate is regulated by divergent molecular networks in spores and seeds

    Vesty, E. F., Saidi, Y., Moody, L. A., Holloway, D., Whitbread, A., Needs, S., Choudhary, A., Burns, B., McLeod, D., Bradshaw, S. J., Bae, H., King, B. C., Bassel, G. W., Simonsen, H. T. & Coates, J. C., 2016, In: New Phytologist. 211, 3, p. 952-966 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    The defense metabolite, allyl glucosinolate, modulates Arabidopsis thaliana biomass dependent upon the endogenous glucosinolate pathway

    Francisco, M., Joseph, B., Caligagan, H., Li, B., Corwin, J. A., Lin, C., Kerwin, R., Burow, Meike & Kliebenstein, D. J., 2016, In: Frontiers in Plant Science. 7, 14 p., 774.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    The evolutionarily conserved protein PHOTOSYNTHESIS AFFECTED MUTANT71 is required for efficient manganese uptake at the thylakoid membrane in Arabidopsis

    Schneider, A., Steinberger, I., Herdean, A., Gandini, C., Eisenhut, M., Kurz, S., Morper, A., Hoecker, N., Rühle, T., Labs, M., Flügge, U. I., Geimer, S., Schmidt, Sidsel Birkelund, Husted, Søren, Weber, A. P. M., Spetea, C. & Leister, D. M., 2016, In: Plant Cell. 28, 4, p. 892-910 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    The low molecular weight protein PsaI stabilizes the light-harvesting complex II docking site of photosystem I

    Plöchinger, M., Torabi, S., Rantala, M., Tikkanen, M., Suorsa, M., Jensen, Poul Erik, Aro, E. M. & Meurer, J., 2016, In: Plant Physiology. 172, 1, p. 450-463 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    The next step in microbial production of plant natural compounds - pathway optimization and stable integration

    Crocoll, C., Petersen, A. & Halkier, Barbara Ann, 2016, In: Planta Medica. 82, S 01, 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  50. Published

    The non-coding RNA Ncr0700/PmgR1 is required for photomixotrophic growth and the regulation of glycogen accumulation in the cyanobacterium Synechocystis sp. PCC 6803

    de Porcellinis, A. J., Klähn, S., Rosgaard, L., Kirsch, R., Gutekunst, K., Georg, J., Hess, W. R. & Sakuragi, Y., 2016, In: Plant and Cell Physiology. 57, 10, p. 2091-2103 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    The quantitative basis of the Arabidopsis innate immune system to endemic pathogens depends on pathogen genetics

    Corwin, J. A., Copeland, D., Feusier, J., Subedy, A., Eshbaugh, R., Palmer, C., Maloof, J. & Kliebenstein, D. J., 2016, In: P L o S Genetics. 12, 2, 29 p., e1005789.

    Research output: Contribution to journal › Journal article › Research › peer-review

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