Section for Molecular Plant Biology

  1. Published

    Elucidating the Role of Transport Processes in Leaf Glucosinolate Distribution

    Madsen, S. R., Olsen, C. E., Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 1 Nov 2014, In: Plant Physiology. 166, 3, p. 1450-1462

    Research output: Contribution to journalJournal articleResearchpeer-review

  2. Published

    Elucidating the Roles of Transport Processes in Glucosinolate Distribution

    Madsen, S. R., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 165 p.

    Research output: Book/ReportPh.D. thesisResearch

  3. Published

    Elucidation of the structure-function relationship in the Nitrate and Peptide Transporter Family

    Kanstrup, Christa, 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 189 p.

    Research output: Book/ReportPh.D. thesisResearch

  4. Published

    Emerging properties and functional consequences of noncoding transcription

    Ard, R., Allshire, R. C. & Marquardt, Sebastian, 2017, In: Genetics (Print). 207, 2, p. 357-367 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Endophytic colonization of tomato plants by the biological control agent Clonostachys rosea

    Høyer, A. K., Jørgensen, Hans Jørgen Lyngs, Amby, Daniel Buchvaldt & Jensen, Birgit, 15 Jun 2014. 1 p.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  6. Published

    Engineering Escherichia coli towards production of plant specialized metabolites

    Poborsky, Michal, 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 129 p.

    Research output: Book/ReportPh.D. thesisResearch

  7. Published

    Engineering and Optimization of the Chain Elongation Pathway of Glucosinolate Biosynthesis

    Mirza, N. M. A., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 120 p.

    Research output: Book/ReportPh.D. thesisResearch

  8. Published

    Engineering and optimization of the 2-phenylethylglucosinolate production in Nicotiana benthamiana by combining biosynthetic genes from Barbarea vulgaris and Arabidopsis thaliana

    Wang, Cuiwei, Crocoll, C., Agerbirk, Niels & Halkier, Barbara Ann, 2021, In: Plant Journal. 106, 4, p. 978-992

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Engineering mammalian cells to produce plant-specific N-glycosylation on proteins

    Larsen, J. S., Karlsson, R. T. G., Tian, W., Schulz, M. A., Matthes, A., Clausen, Henrik, Petersen, Bent L & Yang, Zhang, 2020, In: Glycobiology. 30, 8, p. 528-538 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Engineering of methionine chain elongation part of glucoraphanin pathway in E. coli

    Mirza, N. M. A., Crocoll, C., Olsen, C. E. & Halkier, Barbara Ann, 2016, In: Metabolic Engineering. 35, p. 31-37 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Engineering of plastids to optimize the production of high-value metabolites and proteins

    Jensen, Poul Erik & Scharff, L. B., Oct 2019, In: Current Opinion in Biotechnology. 59, p. 8-15 8 p.

    Research output: Contribution to journalReviewResearchpeer-review

  12. Published

    Epidermal bladder cells as a herbivore defense mechanism

    Moog, Max William, Yang, X., Bendtsen, Amalie Kofoed, Dong, L., Crocoll, C., Imamura, T., Mori, M., Cushman, J. C., Kant, M. R. & Palmgren, Michael, 2023, In: Current Biology. 33, 21, p. 4662-4673.e6 19 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Epigenetic Impact on Plant Plasticity

    Aller, Emma Sofie Timm, 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 175 p.

    Research output: Book/ReportPh.D. thesisResearch

  14. Published

    Epistasis × environment interactions among Arabidopsis thaliana glucosinolate genes impact complex traits and fitness in the field

    Kerwin, R. E., Feusier, J., Muok, A., Lin, C., Larson, B., Copeland, D., Corwin, J. A., Rubin, M. J., Francisco, M., Li, B., Joseph, B., Weinig, C. & Kliebenstein, D. J., 2017, In: New Phytologist. 215, 3, p. 1249-1263 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Epistatic Transcription Factor Networks Differentially Modulate Arabidopsis Growth and Defense

    Li, B., Tang, M., Caseys, C., Nelson, A., Zhou, M., Zhou, X., Brady, S. M. & Kliebenstein, D. J., 2020, In: Genetics. 214, 2, p. 529-541 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Evolution in regulatory networks coordinating development and defense chemistry

    Weber, K., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/ReportPh.D. thesisResearch

  17. Published

    Evolution of A bHLH Interaction Motif

    Millard, P. S., Kragelund, Birthe Brandt & Burow, Meike, 2021, In: International Journal of Molecular Sciences. 22, 1, 18 p., 447.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Expanding the toolbox for Synthetic Biology by plant-derived modules: From protein expression regulation to protein scaffolding

    Borràs I Gas, G., 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 131 p.

    Research output: Book/ReportPh.D. thesisResearch

  19. Published

    Expansive phenotypic landscape of Botrytis cinerea shows differential contribution of genetic diversity and plasticity

    Corwin, J. A., Subedy, A., Eshbaugh, R. & Kliebenstein, D. J., 2016, In: Molecular Plant - Microbe Interactions. 29, 4, p. 287-298 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    Exploiting photosynthesis-driven P450 activity to produce indican in tobacco chloroplasts

    Mellor, Silas Busck, Behrendorff, J. B. Y. H., Ipsen, J. O., Crocoll, C., Laursen, Tomas, Gillam, E. M. J. & Pribil, Mathias, 2023, In: Frontiers in Plant Science. 13, 17 p., 1049177.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Export of defensive glucosinolates is key for their accumulation in seeds

    Xu, Deyang, Sanden, Niels Christian Holm, Hansen, Line Lykke, Belew, Zeinu Mussa, Madsen, S. R., Meyer, L., Jørgensen, M. E., Hunziker, P., Veres, D., Crocoll, C., Schulz, Alexander, Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2023, In: Nature. 617, p. 132-138

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Expression and membrane-targeting of an active plant cytochrome P450 in the chloroplast of the green alga Chlamydomonas reinhardtii

    Gangl, D., Zedler, J. A. Z., Wlodarczyk, A. J., Jensen, Poul Erik, Purton, S. & Robinson, C., 2015, In: Phytochemistry. 110, p. 22-28 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Expression and secretion of a lytic polysaccharide monooxygenase by a fast-growing cyanobacterium

    Russo, D. A., Zedler, J. A. Z., Wittmann, D. N., Möllers, B., Singh, R. K., Batth, Tanveer Singh, van Oort, B., Olsen, Jesper Velgaard, Bjerrum, Morten Jannik & Jensen, Poul Erik, 2019, In: Biotechnology for Biofuels. 12, 1, 13 p., 74.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Extending the biosynthetic repertoires of cyanobacteria and chloroplasts

    Nielsen, A. J. Z., Mellor, Silas Busck, Vavitsas, K., Wlodarczyk, A. J., Gnanasekaran, Thiyagarajan, Perestrello Ramos H de Jesus, M., King, B. C., Bakowski, K. & Jensen, Poul Erik, 2016, In: Plant Journal. 87, 1, p. 87-102 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    FIONA1-mediated methylation of the 3'UTR of FLC affects FLC transcript levels and flowering in Arabidopsis

    Sun, B., Bhati, K. K., Song, P., Edwards, Ashleigh Katrina, Petri, Louise, Kruusvee, Valdeko, Blaakmeer, A., Dolde, U., Rodrigues, V., Straub, D., Yang, J., Jia, G. & Wenkel, Stephan, 2022, In: PLOS Genetics. 18, 9, 22 p., e1010386.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    FRS7 and FRS12 recruit NINJA to regulate expression of glucosinolate biosynthesis genes

    Fernández‐calvo, P., Iñigo, S., Glauser, G., Vanden Bossche, R., Tang, M., Li, B., De Clercq, R., Nagels Durand, A., Eeckhout, D., Gevaert, K., De Jaeger, G., Brady, S. M., Kliebenstein, D. J., Pauwels, L., Goossens, A. & Ritter, A., 2020, In: New Phytologist. 227, 4, p. 1124-1137

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    False idolatry of the mythical growth versus immunity tradeoff in molecular systems plant pathology

    Kliebenstein, D. J., 2016, In: Physiological and Molecular Plant Pathology. 95, p. 55-59 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Published

    Feeding on leaves of the glucosinolate transporter mutant gtr1gtr2 reduces fitness of Myzus persicae

    Madsen, S. R., Kunert, G., Reichelt, M., Gershenzon, J. & Halkier, Barbara Ann, 2015, In: Journal of Chemical Ecology. 41, 11, p. 975-984 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    Fine mapping identifies NAD-ME1 as a candidate underlying a major locus controlling temporal variation in primary and specialized metabolism in Arabidopsis

    Francisco, M., Kliebenstein, D. J., Rodríguez, V. M., Soengas, P., Abilleira, R. & Cartea, M. E., 2021, In: Plant Journal. 106, 2, p. 454-467

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Fine-tuning of photosynthesis requires CURVATURE THYLAKOID1-mediated thylakoid plasticity

    Pribil, Mathias, Sandoval Ibáñez, O. A., Xu, W., Sharma, A., Labs, M., Liu, Q., Galgenmüller, C., Schneider, T., Wessels, M., Matsubara, S., Jansson, S., Wanner, G. & Leister, D., 2018, In: Plant Physiology. 176, 3, p. 2351-2364 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    First report of Fusarium lichenicola as a causal agent of fruit rot in Pomelo (Citrus maxima)

    Amby, Daniel Buchvaldt, Thuy, T. T. T., Ho, B. D., Kosawang, Chatchai, Son, T. B. & Jørgensen, Hans Jørgen Lyngs, 2015, In: Plant Disease. 99, 9, p. 1278 1 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    Foliar-applied ethephon enhances the content of anthocyanin of black carrot roots (Daucus carota ssp. sativus var. atrorubens Alef.)

    Barba Espin, G., Glied, S., Crocoll, C., Dzhanfezova, T., Joernsgaard, B., Okkels, F., Lütken, Henrik Vlk & Müller, Renate, 2017, In: B M C Plant Biology. 17, 11 p., 70.

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    Fotosyntese-Planters omsætning af solenergi til kemisk energi

    Møller, Birger Lindberg, Halkier, Barbara Ann, Olsen, I., Nielsen, H. & Høj, P. B., 1987, In: Naturens Verden. p. 177-184 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    From Single Cells to Flowers – Biological Complexity Driving Plant Reproductive Development

    Schwarz, Isabel Aimèe, Neumann, M., Vega, R., Xu, X., Cornaro, L., Colombo, L., Vernoux, T., Xu, J., Marquardt, Sebastian & Kaufmann, K., 2021, Preprints.org.

    Research output: Working paperPreprintResearch

  35. Published

    Functional Significance of Conserved Cysteines in the Extracellular Loops of the ATP Binding Cassette Transporter Pdr11p

    Stanchev, L. D., Marek, M., Xian, F., Klöhn, M., Silvestro, D., Dittmar, G., Lopez Marques, Rosa Laura & Pomorski, Thomas Guenther, 2021, In: Journal of Fungi. 7, 1, 16 p., 2.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    Functional Variation in the Non-Coding Genome: Molecular Implications for Food Security

    Gullotta, Giorgio, Korte, A. & Marquardt, Sebastian, 2023, In: Journal of Experimental Botany. 74, 7, p. 2338–2351 14 p.

    Research output: Contribution to journalReviewResearchpeer-review

  37. Published

    Functional characterization of CURT1- complexes in A. thaliana: Role in thylakoid plasticity and chloroplast biogenesis

    Sandoval Ibáñez, O. A., 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/ReportPh.D. thesisResearch

  38. Published

    Functional expression and characterization of plant ABC transporters in Xenopus laevis oocytes for transport engineering purposes

    Xu, Deyang, Veres, D., Belew, Zeinu Mussa, Olsen, C. E., Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2016, Synthetic biology and metabolic engineering in plants and microbes : Part B: Plant metabolism. p. 207-224 8 p. (Methods in Enzymology, Vol. 576).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  39. Published

    Fusarium graminearum and its interactions with cereal heads: studies in the proteomics era

    Yang, F., Jacobsen, S., Jørgensen, Hans Jørgen Lyngs, Collinge, David B., Svensson, B. & Finnie, C. S., 2013, In: Frontiers in Plant Science. 4, 37

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    Fusion of ferredoxin and cytochrome P450 enables direct light-driven biosynthesis

    Mellor, Silas Busck, Nielsen, A. J. Z., Burow, Meike, Motawie, Mohammed Saddik, Jakubauskas, D., Møller, Birger Lindberg & Jensen, Poul Erik, 2016, In: ACS chemical biology. 11, 7, p. 1862-1869 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Future cereal starch bioengineering: cereal ancestors encounter gene technology and designer enzymes

    Blennow, Andreas, Jensen, S. L., Shaik, S. S., Skryhan, K., Carciofi, M., Holm, P. B., Hebelstrup, K. & Tanackovic, V., 2013, In: Cereal Chemistry. 90, 4, p. 274-287 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    GET-Mediated Export of Defensive Glucosinolates is Key for Seed Accumulation

    Xu, Deyang, Sanden, Niels Christian Holm, Hansen, Line Lykke, Belew, Zeinu Mussa, Madsen, S. R., Meyer, L., Jørgensen, M. E., Hunziker, P., Veres, D., Crocoll, C., Schulz, Alexander, Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2023.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  43. Published

    GTR-Mediated Radial Import Directs Accumulation of Defensive Glucosinolates to Sulfur-Rich Cells in the Phloem Cap of Arabidopsis Inflorescence Stem

    Xu, Deyang, Hunziker, P., Koroleva, O., Blennow, Andreas, Crocoll, C., Schulz, Alexander, Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2019, In: Molecular Plant. 12, 11, p. 1474-1484

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    Galactosyltransferases from Arabidopsis thaliana in the biosynthesis of type II arabinogalactan: molecular interaction enhances enzyme activity

    Dilokpimol, A., Poulsen, C. P., Vereb, G., Kaneko, S., Schulz, Alexander & Geshi, N., 2014, In: B M C Plant Biology. 14, 14 p., 90.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    General introduction to glucosinolates

    Halkier, Barbara Ann, 2016, Advances in botanical research. Elsevier, Vol. 80. p. 1-14 14 p. (Advances in Botanical Research).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  46. Published

    Generation of microalga Chlamydomonas reinhardtii expressing shrimp antiviral dsRNA without supplementation of antibiotics

    Charoonnart, P., Worakajit, N., Zedler, J. A. Z., Meetam, M., Robinson, C. & Saksmerprome, V., 2019, In: Scientific Reports. 9, p. 1-8 3164.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    Genetic variation in the nuclear and organellar genomes modulates stochastic variation in the metabolome, growth, and defense

    Joseph, B., Corwin, J. A. & Kliebenstein, D. J., 2015, In: P L o S Genetics. 11, 1, 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Genetic variation underlying differential ammonium and nitrate responses in Arabidopsis thaliana

    Katz, E., Knapp, A., Lensink, M., Keller, C. K., Stefani, J., Li, J., Shane, E., Tuermer-Lee, K., Bloom, A. J. & Kliebenstein, D. J., 2022, In: The Plant Cell. 34, 12, p. 4696-4713

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Genetic variation, environment and demography intersect to shape Arabidopsis defense metabolite variation across Europe

    Katz, E., Li, J. J., Jaegle, B., Ashkenazy, H., Abrahams, S. R., Bagaza, C., Holden, S., Pires, C. J., Angelovici, R. & Kliebenstein, D. J., 2021, In: eLife. 10, 25 p., e67784.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    Genome and chromosome identification in cultivated barley and related species of the Triticeae (Poaceae) by in situ hybridization with the GAA-satellite sequence

    Pedersen, Carsten, Rasmussen, S. K. & Linde-Laursen, I., 1 Jan 1996, In: Genome. 39, 1, p. 93-104 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

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