Section for Molecular Plant Biology

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  1. 2019
  2. Published

    Glucosinolate Production in Heterologous Hosts: Choosing the right chassis

    Petersen, A., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  3. Published

    Growth under high light and elevated temperature affects metabolic responses and accumulation of health-promoting metabolites in kale varieties

    Alegre, S., Pascual, J., Trotta, A., Gollan, P. J., Yang, W., Yang, B., Aro, E., Burow, Meike & Kangasjärvi, S., 2019, Cold Spring Harbor Laboratory, 51 p. (bioRxiv).

    Research output: Working paper › Preprint › Research

  4. Published

    Identification and heterologous expression of biosynthetic genes for glucosinolate production

    Wang, Cuiwei, 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 165 p.

    Research output: Book/Report › Ph.D. thesis › Research

  5. Published

    Interactions of Tomato and Botrytis cinerea Genetic Diversity: Parsing the Contributions of Host Differentiation, Domestication, and Pathogen Variation

    Soltis, N. E., Atwell, S., Shi, G., Fordyce, R., Gwinner, R., Gao, D., Shafi, A. & Kliebenstein, D. J., 2019, In: Plant Cell. 31, 2, p. 502-519

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    K+ and Cl− channels/transporters independently fine-tune photosynthesis in plants

    Dukic, E., Herdean, A., Cheregi, O., Sharma, A., Nziengui, H., Dmitruk, D., Solymosi, K., Pribil, Mathias & Spetea, C., 2019, In: Scientific Reports. 9, p. 1-12 8639.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Metabolic engineering of cyanobacteria for the production of aromatic compounds

    Furelos Brey, L. M., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  8. Published

    Metaproteomics of Freshwater Microbial Communities

    Russo, D. A., Couto, N., Beckerman, A. P. & Pandhal, J., 2019, Mass Spectrometry of Proteins. Springer, Vol. 1977. p. 145-155 11 p. (Methods in molecular biology (Clifton, N.J.)).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  9. Published

    Plant Networks as Traits and Hypotheses: Moving Beyond Description

    Marshall-Colon, A. & Kliebenstein, D. J., 2019, In: Trends in Plant Science. 24, 9, p. 840-852

    Research output: Contribution to journal › Review › Research › peer-review

  10. Published

    Plant-necrotroph co-transcriptome networks illuminate a metabolic battlefield

    Zhang, W., Corwin, J. A., Copeland, D. H., Feusier, J., Eshbaugh, R., Cook, D. E., Atwell, S. & Kliebenstein, D. J., 2019, In: eLife. 8, e44279.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Questionomics: Using Big Data to Ask and Answer Big Questions

    Kliebenstein, D. J., 2019, In: Plant Cell. 31, 7, p. 1404-1405

    Research output: Contribution to journal › Editorial › Research

  12. Published

    R2R3 MYB Transcription Factors - Functions outside the DNA-Binding Domain

    Millard, P. S., Kragelund, Birthe Brandt & Burow, Meike, 2019, In: Trends in Plant Science. 24, 10, p. 934-946

    Research output: Contribution to journal › Review › Research › peer-review

  13. Published

    Specificity of MYB interactions relies on motifs in ordered and disordered contexts

    Millard, P. S., Weber, K., Kragelund, Birthe Brandt & Burow, Meike, 2019, In: Nucleic Acids Research. 47, 18, p. 9592-9608 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Sulfur metabolism in Allium cepa is hardly affected by chloride and sulfate salinity

    Aghajanzadeh, T. A., Reich, M., Hawkesford, M. J. & Burow, Meike, 2019, In: Archives of Agronomy and Soil Science. 65, 7, p. 945-956

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    THU-491-The role of alanine glyoxylate aminotransferase in hepatocellular carcinoma

    Satriano, L., Lewinska, Monika, Rourke, C. O., Oliveira, D. V., Bhatt, D. K., Taranta, A., Herr, M., Straub, B., Conner, D. E. A., Budhu, D. A., Pomyen, Y., Ma, Tao, Gerhart-Hines, Zach, Stjernegaard, D. C. S., Matter, M., Crocoll, D. C., Wang, X. W., Marquardt, J. & Andersen, Jesper Bøje, 2019, p. e377.

    Research output: Contribution to conference › Poster › Research

  16. Published

    The Roles of Transcription Speed and Transcriptional Interference in Plant Gene Expression

    Leng, Xueyuan, 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  17. Published

    The effect of modulating the quantity of enzymes in a model ethanol pathway on metabolic flux in Synechocystis sp. PCC 6803

    Bartasun, P., Prandi, N., Storch, M., Aknin, Y., Bennett, M., Palma, A., Baldwin, G., Sakuragi, Y., Jones, P. R. & Rowland, J., 2019, In: PeerJ. 2019, 7, p. 1-18 7529.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Thermal unfolding and refolding of a lytic polysaccharide monooxygenase from Thermoascus aurantiacus

    Singh, R. K., Blossom, B. M., Russo, D. A., van Oort, B., Croce, R., Jensen, P. E., Felby, C. & Bjerrum, Morten Jannik, 2019, In: R S C Advances. 9, 9 p., 29734.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Transport Engineering in Synthetic Biology: Identification and characterization of phlorizin transporters enables increased production in yeast

    Belew, Zeinu Mussa, 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  20. Published

    Unravelling the Transport Mechanism of NPF Transporters

    Wulff, N., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  21. Published

    Secretion of Acetylxylan Esterase From Chlamydomonas reinhardtii Enables Utilization of Lignocellulosic Biomass as a Carbon Source

    Ramos-Martinez, E. M., Fimognari, L., Rasmussen, M. K. & Sakuragi, Y., Feb 2019, In: Frontiers in Bioengineering and Biotechnology. 7, FEB, p. 1-9 35.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Transcription-driven chromatin repression of Intragenic transcription start sites

    Nielsen, M., Ard, R., Leng, Xueyuan, Ivanov, M., Kindgren, P. R., Pelechano, V. & Marquardt, Sebastian, 1 Feb 2019, In: PLOS Genetics. 15, 2, p. 1-33 e1007969.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Quantification and Localization of Formylated Phloroglucinol Compounds (FPCs) in Eucalyptus Species

    Santos, B. M. D., Zibrandtsen, J. F. S., Gunbilig, D., Sørensen, Mette, Cozzi, F., Boughton, B. A., Heskes, A. M. & Neilson, Elizabeth Heather Jakobsen, 26 Feb 2019, In: Frontiers in Plant Science. 10, p. 1-14 186.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    A force awakens: exploiting solar energy beyond photosynthesis

    Russo, D. A., Zedler, J. A. Z. & Jensen, Poul Erik, 1 Mar 2019, In: Journal of Experimental Botany. 70, 6, p. 1703–1710

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    An Arabidopsis TIR-Lectin Two-Domain Protein Confers Defense Properties against Tetranychus urticae

    Santamaría, M. E., Martínez, M., Arnaiz, A., Rioja, C., Burow, Meike, Grbic, V. & Díaza, I., 1 Apr 2019, In: Plant Physiology. 179, 4, p. 1298-1314

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Deletion of biosynthetic genes, specific SNP patterns and differences in transcript accumulation cause variation in hydroxynitrile glucoside content in barley cultivars

    Ehlert, M., Jagd, L. M., Braumann, I., Dockter, C., Crocoll, C., Motawie, Mohammed Saddik, Møller, Birger Lindberg & Lyngkjær, M. F., 5 Apr 2019, In: Scientific Reports. 9, p. 1-10 5730.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    The P5A ATPase Spf1p is stimulated by phosphatidylinositol 4-phosphate and influences cellular sterol homeostasis

    Sørensen, D. M., Holen, H. W., Pedersen, J. T., Martens, Helle Jakobe, Silvestro, D., Stanchev, L. D., Costa, S. R., Pomorski, Thomas Guenther, Lopez Marques, Rosa Laura & Palmgren, Michael, 15 Apr 2019, In: Molecular Biology of the Cell. 30, 9, p. 1069-1084

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Membrane-Bound Protein Scaffolding in Diverse Hosts Using Thylakoid Protein CURT1A

    Behrendorff, J. B. Y. H., Sandoval-Ibañez, O. A., Sharma, A. & Pribil, Mathias, 19 Apr 2019, In: A C S Synthetic Biology. 8, 4, p. 611-620

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Production of polyhydroxybutyrate in wood-ljungdahl microorganisms

    Tappel, R., Behrendorff, J. B. Y. H., Koepke, M., Marcellin, E., Lemgruber, R. D. S. P., Valgepea, K. & Nielsen, L. K., 25 Apr 2019, IPC No. C12P7/625, Lanzatech, Inc., Patent No. US20190119706A1, Priority date 4 Oct 2017, Priority No. US201762568127P

    Research output: Patent

  30. Published

    Identification of genes involved in shea butter biosynthesis from Vitellaria paradoxa fruits through transcriptomics and functional heterologous expression

    Wei, Y., Ji, B., Siewers, V., Xu, Deyang, Halkier, Barbara Ann & Nielsen, J., May 2019, In: Applied Microbiology and Biotechnology. 103, 9, p. 3727–3736

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    The cytochrome P450 CYP72A552 is key to production of hederagenin‐based saponins that mediate plant defense against herbivores

    Liu, Q., Khakimov, Bekzod, Cárdenas, Pablo D., Cozzi, F., Olsen, C. E., Jensen, Karen Rysbjerg, Hauser, T. P. & Bak, Søren, May 2019, In: New Phytologist (Online). 222, 3, p. 1599-1609

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Changing substrate specificity and iteration of amino acid chain elongation in glucosinolate biosynthesis through targeted mutagenesis of Arabidopsis methylthioalkylmalate synthase1

    Petersen, A., Gram Hansen, L., Mirza, N., Crocoll, C., Mirza, Osman Asghar & Halkier, Barbara Ann, Jul 2019, In: Bioscience Reports. 39, p. 1-15 BSR20190446.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    De novo production of benzyl glucosinolate in Escherichia coli

    Petersen, A., Crocoll, C. & Halkier, Barbara Ann, 1 Jul 2019, In: Metabolic Engineering. 54, p. 24-34

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Arabidopsis glucosinolate storage cells transform into phloem fibres at late stages of development

    Hunziker, P., Halkier, Barbara Ann & Schulz, Alexander, Aug 2019, In: Journal of Experimental Botany. 70, 16, p. 4305–4317

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Metabolic changes and increased levels of bioactive compounds in white radish (Raphanus sativus L. Cv. 01) sprouts elicited by oligochitosan

    Rakpenthai, A., Khaksar, G., Burow, Meike, Olsen, C. E. & Sirikantaramas, S., 19 Aug 2019, In: Agronomy. 9, 8, p. 1-14 467.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Defining optimal electron transfer partners for light-driven cytochrome P450 reactions

    Mellor, Silas Busck, Vinde, M. H., Nielsen, A. Z., Hanke, G. T., Abdiaziz, K., Roessler, M. M., Burow, Meike, Motawie, Mohammed Saddik, Møller, Birger Lindberg & Jensen, Poul Erik, 1 Sep 2019, In: Metabolic Engineering. 55, p. 33-43

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Identification and characterisation of two high-affinity glucose transporters from the spoilage yeast Brettanomyces bruxellensis

    Tiukova, I. A., Møller-Hansen, I., Belew, Zeinu Mussa, Darbani, B., Boles, E., Nour-Eldin, Hussam Hassan, Linder, T., Nielsen, J. & Borodina, I., 1 Sep 2019, In: FEMS Microbiology Letters. 366, 17, p. 1-9 fnz222.

    Research output: Contribution to journal › Letter › Research › peer-review

  38. Published

    Engineering of plastids to optimize the production of high-value metabolites and proteins

    Jensen, Poul Erik & Scharff, L. B., Oct 2019, In: Current Opinion in Biotechnology. 59, p. 8-15 8 p.

    Research output: Contribution to journal › Review › Research › peer-review

  39. Published

    An Optimized Screen Reduces the Number of GA Transporters and Provides Insights Into Nitrate Transporter 1/Peptide Transporter Family Substrate Determinants

    Wulff, N., Ernst, H. A., Jørgensen, M. E., Lambertz, S., Maierhofer, T., Belew, Zeinu Mussa, Crocoll, C., Motawie, Mohammed Saddik, Geiger, D., Jørgensen, Flemming Steen, Mirza, Osman Asghar & Nour-Eldin, Hussam Hassan, 3 Oct 2019, In: Frontiers in Plant Science. 10, 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    The Role of Phosphorylation Dynamics of CURVATURE THYLAKOID 1B in Plant Thylakoid Membranes

    Trotta, A., Bajwa, A. A., Mancini, I., Paakkarinen, V., Pribil, Mathias & Aro, E. M., Dec 2019, In: Plant Physiology. 181, 4, p. 1615-1631

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Ultrastructural modeling of small angle scattering from photosynthetic membranes

    Jakubauskas, D., Kowalewska, Ł., Sokolova, A. V., Garvey, C. J., Mortensen, Kell, Jensen, Poul Erik & Kirkensgaard, Jacob Judas Kain, 1 Dec 2019, In: Scientific Reports. 9, 13 p., 19405.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. 2020
  43. Published

    A CRISPR way for accelerating improvement of food crops

    Zhang, Yi, Pribil, Mathias, Palmgren, Michael & Gao, C., 2020, In: Nature Food. 1, 4, p. 200-205 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    A G(enomic)P(ositioning)S(ystem) for Plant RNAPII Transcription

    Leng, Xueyuan, Thomas, Quentin, Rasmussen, S. H. & Marquardt, Sebastian, 2020, In: Trends in Plant Science. 25, 8, p. 744-764

    Research output: Contribution to journal › Review › Research › peer-review

  45. Published

    A flavin-dependent monooxygenase catalyzes the initial step in cyanogenic glycoside synthesis in ferns

    Thodberg, S., Sørensen, Mette, Bellucci, M., Crocoll, C., Bendtsen, Amalie Kofoed, Nelson, D. R., Motawie, Mohammed Saddik, Møller, Birger Lindberg & Neilson, Elizabeth Heather Jakobsen, 2020, In: Communications Biology . 3, 11 p., 507.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Antimicrobial solid media for screening non‐sterile Arabidopsis thaliana seeds

    Behrendorff, J., Borràs I Gas, G. & Pribil, Mathias, 2020, In: Physiologia Plantarum.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Characterization of Arabidopsis thaliana Promoter Bidirectionality and Antisense RNAs by Inactivation of Nuclear RNA Decay Pathways

    Thieffry, A., Vigh, Maria Louisa, Lange, Jette Bornholdt, Ivanov, M., Brodersen, Peter & Sandelin, Albin Gustav, 2020, In: The Plant Cell. 32, 6, p. 1845-1867 23 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Characterization of Arabidopsis CYP79C1 and CYP79C2 by Glucosinolate Pathway Engineering in Nicotiana benthamiana Shows Substrate Specificity Toward a Range of Aliphatic and Aromatic Amino Acids

    Wang, Cuiwei, Dissing, M. M., Agerbirk, Niels, Crocoll, C. & Halkier, Barbara Ann, 2020, In: Frontiers in Plant Science. 11, 13 p., 57.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Control of flowering in rice through synthetic microProteins

    qmd783, qmd783, Ariza, J. G., Brambilla, V., Sun, B., Bhati, K. K., Fornara, F. & Wenkel, Stephan, 2020, In: Journal of Integrative Plant Biology. 62, 6, p. 730-736

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Copper toxicity affects indolic glucosinolates and gene expression of key enzymes for their biosynthesis in Chinese cabbage

    Aghajanzadeh, T. A., Prajapati, D. H. & Burow, Meike, 2020, In: Archives of Agronomy and Soil Science. 66, 9, p. 1288-1301

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    DNA Processing in the Context of Noncoding Transcription

    Gowthaman, U., Garcia Pichardo, Desire, Jin, Yu, Schwarz, Isabel Aimèe & Marquardt, Sebastian, 2020, In: Trends in Biochemical Sciences. 45, 12, p. 1009-1021

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    De novo indol-3-ylmethyl glucosinolate biosynthesis, and not long-distance transport, contributes to defence of Arabidopsis against powdery mildew

    Hunziker, P., Ghareeb, H., Wagenknecht, L., Crocoll, C., Halkier, Barbara Ann, Lipka, V. & Schulz, Alexander, 2020, In: Plant, Cell and Environment. 43, 6, p. 1571-1583 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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