Section for Molecular Plant Biology

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  1. 2013
  2. Published

    Fusarium graminearum and its interactions with cereal heads: studies in the proteomics era

    Yang, F., Jacobsen, S., Jørgensen, Hans Jørgen Lyngs, Collinge, David B., Svensson, B. & Finnie, C. S., 2013, In: Frontiers in Plant Science. 4, 37

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Future cereal starch bioengineering: cereal ancestors encounter gene technology and designer enzymes

    Blennow, Andreas, Jensen, S. L., Shaik, S. S., Skryhan, K., Carciofi, M., Holm, P. B., Hebelstrup, K. & Tanackovic, V., 2013, In: Cereal Chemistry. 90, 4, p. 274-287 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Integration of biosynthesis and long-distance transport establish organ-specific glucosinolate profiles in vegetative Arabidopsis

    Andersen, T. G., Nour-Eldin, Hussam Hassan, Fuller, V. L., Olsen, C. E., Burow, Meike & Halkier, Barbara Ann, 2013, In: Plant Cell. 25, 8, p. 3133-3145 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Multiplexed quantification of plant thylakoid proteins on western blots using lanthanide-labeled antibodies and laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS)

    de Bang, T. C., Pedas, P., Schjoerring, Jan K., Jensen, Poul Erik & Husted, Søren, 2013, In: Analytical Chemistry. 85, 10, p. 5047-5054 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Pathway elucidation and metabolic engineering of specialized plant metabolites

    Salomonsen, B., 2013, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  7. Published

    Plant sterol metabolism. Δ7-Sterol-C5-Desaturase (STE1/DWARF7), Δ5,7-Sterol-Δ7-Reductase (DWARF5) and Δ24-Sterol-Δ24-Reductase (DIMINUTO/DWARF1) show multiple subcellular localizations in Arabidopsis thaliana (Heynh) L

    Silvestro, D., Andersen, T. G., Schaller, H. & Jensen, Poul Erik, 2013, In: P L o S One. 8, 2, 11 p., e56429.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Proteomic changes and endophytic micromycota during storage of organically and conventionally grown carrots

    Louarn, S. J. Y., Nawrocki, A., Thorup-Kristensen, Kristian, Lund, O. S., Jensen, O. N., Collinge, David B. & Jensen, Birgit, 2013, In: Postharvest Biology and Technology. 76, p. 26-33 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Quantification of vitamin D3 and its hydroxylated metabolites in waxy leaf nightshade (Solanum glaucophyllum Desf.), tomato (Solanum lycopersicum L.) and bell pepper (Capsicum annuum L.)

    Jäpelt, R. B., Silvestro, D., Smedsgaard, J., Jensen, Poul Erik & Jakobsen, J., 2013, In: Food Chemistry. 138, 2-3, p. 1206-1211 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Redirecting photosynthetic reducing power toward bioactive natural product synthesis

    Nielsen, A. J. Z., Ziersen, B. E. F., Jensen, K., Lassen, L. M. M., Olsen, C. E., Møller, Birger Lindberg & Jensen, Poul Erik, 2013, In: A C S Synthetic Biology. 2, 6, p. 308-315 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Specialized roles of the conserved subunit OST3/6 of the oligosaccharyltransferase complex in innate immunity and tolerance to abiotic stresses

    Farid, A., Malinovsky, F. G., Veit, C., Schoberer, J., Zipfel, C. & Strasser, R., 2013, In: Plant Physiology. 162, 1, p. 24-38 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Stabilization of semi-solid-state starch by branching enzyme-assisted chain-transfer catalysis at extreme substrate concentration

    Jensen, S. L., Larsen, F. H., Bandsholm, O. & Blennow, Andreas, 2013, In: Biochemical Engineering Journal. 72, p. 1-10 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Structural and physical properties of granule stabilized starch obtained by branching enzyme treatment

    Jensen, S. L., Zhu, F., Vamadevan, V., Bertoft, E., Seetharaman, K., Bandsholm, O. & Blennow, Andreas, 2013, In: Carbohydrate Polymers. 98, 2, p. 1490-1496 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    TGF-β Signaling Is Associated with Endocytosis at the Pocket Region of the Primary Cilium

    Clement, C. A., Ajbro, K. D., Koefoed, K., Vestergaard, M. L., Veland, I. R., Perestrello Ramos H de Jesus, M., Pedersen, Lotte Bang, Benmerah, A., tcg964, tcg964, Larsen, Lars Allan & Christensen, Søren Tvorup, 2013, In: Cell Reports. 3, 6, p. 1806-1814 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    The emerging field of transport engineering of plant specialized metabolites

    Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2013, In: Current Opinion in Biotechnology. 24, 2, p. 263-270 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Transcriptional reprogramming of wheat and the hemibiotrophic pathogen Septoria tritici during two phases of the compatible interaction

    Yang, F., Li, W. & Jørgensen, Hans Jørgen Lyngs, 2013, In: P L o S One. 8, 11, 15 p., e81606.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Cytoplasmic genetic variation and extensive cytonuclear interactions influence natural variation in the metabolome

    Joseph, B., Corwin, J. A., Li, B., Atwell, S. & Kliebenstein, D. J., 8 Oct 2013, In: eLife. 2

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    The AreA transcription factor in Fusarium graminearum regulates the use of some nonpreferred nitrogen sources and secondary metabolite production

    Giese, N. H., Sondergaard, T. E. & Sorensen, J. L., 1 Nov 2013, In: Fungal Biology. 117, 11-12, p. 814-821 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. 2014
  20. Published

    A Regulatory RNA Inducing Transgenerationally Inherited Phenotypes: Studies on Natural Variation in Glucosinolate Profiles and Flowering Time

    Jensen, L. M., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 123 p.

    Research output: Book/Report › Ph.D. thesis › Research

  21. Published

    A unified nomenclature of NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER family members in plants

    Léran, S., Varala, K., Boyer, J-C., Chiurazzi, M., Crawford, N., Daniel-Vedele, F., David, L., Dickstein, R., Fernandez, E., Forde, B., Gassmann, W., Geiger, D., Gojon, A., Gong, J-M., Halkier, B. A., Harris, J. M., Hedrich, R., Limami, A. M., Rentsch, D., Seo, M. & 4 others, Tsay, Y., Zhang, M., Coruzzi, G. & Lacombe, B., 2014, In: Trends in Plant Science. 19, 1, p. 5-9 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Anchoring a plant cytochrome P450 via PsaM to the thylakoids in Synechococcus sp. PCC 7002: evidence for light-driven biosynthesis

    Lassen, L. M. M., Nielsen, A. J. Z., Olsen, C. E., Bialek, W., Jensen, K., Møller, Birger Lindberg & Jensen, Poul Erik, 2014, In: P L o S One. 9, 7, 10 p., e102184.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Arabidopsis gulliver1/superroot2-7 identifies a metabolic basis for auxin and brassinosteroid synergy

    Maharjan, P. M., Dilkes, B. P., Fujioka, S., Pencik, A., Ljung, K., Burow, Meike, Halkier, Barbara Ann & Choe, S., 2014, In: Plant Journal. 80, 5, p. 797-808 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Arabinogalactan glycosyltransferases target to a unique subcellular compartment that may function in unconventional secretion in plants

    Poulsen, C. P., Dilokpimol, A., Mouille, G., Burow, Meike & Geshi, N., 2014, In: Traffic. 15, 11, p. 1219-1234 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Chloroplast evolution, structure and functions

    Jensen, Poul Erik & Leister, D. M., 2014, In: F1000 Prime. 6, 14 p., 40.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Cyanobacteria as an experimental platform for modifying bacterial and plant photosynthesis

    Jensen, Poul Erik & Leister, D. M., 2014, In: Frontiers in Bioengineering and Biotechnology. 2, 4 p., 7.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Dynamic composition, shaping and organization of plastid nucleoids

    Powikrowska, M., Oetke, S., Jensen, Poul Erik & Krupinska, K., 2014, In: Frontiers in Plant Science. 5, 13 p., 424.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Elucidating the Roles of Transport Processes in Glucosinolate Distribution

    Madsen, S. R., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 165 p.

    Research output: Book/Report › Ph.D. thesis › Research

  29. Published

    Engineering and Optimization of the Chain Elongation Pathway of Glucosinolate Biosynthesis

    Mirza, N. M. A., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 120 p.

    Research output: Book/Report › Ph.D. thesis › Research

  30. Published

    Galactosyltransferases from Arabidopsis thaliana in the biosynthesis of type II arabinogalactan: molecular interaction enhances enzyme activity

    Dilokpimol, A., Poulsen, C. P., Vereb, G., Kaneko, S., Schulz, Alexander & Geshi, N., 2014, In: B M C Plant Biology. 14, 14 p., 90.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    How to discover a metabolic pathway? An update on gene identification in aliphatic glucosinolate biosynthesis, regulation and transport

    Jensen, L. M., Halkier, Barbara Ann & Burow, Meike, 2014, In: Biological Chemistry. 395, 5, p. 529-543 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Identification and Characterization of Glucosinolate Transporters

    Jørgensen, M. E., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  33. Published

    Microbial production of the cancer-preventive glucosinolate Glucoraphanin - Nicotiana benthamiana as tool to alleviate bottle necks in metabolic engineering

    Crocoll, C., Mirza, N. M. A., Reichelt, M. & Halkier, Barbara Ann, 2014, In: Planta Medica. 80, 16, p. 1371-1371

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  34. Published

    Orchestration of plant defense systems: genes to populations

    Kliebenstein, D. J., 2014, In: Trends in Plant Science. 19, 4, p. 250-255 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Redirecting photosynthetic electron flow into light-driven synthesis of alternative products including high-value bioactive natural compounds

    Lassen, L. M. M., Nielsen, A. J. Z., Ziersen, B. E. F., Gnanasekaran, Thiyagarajan, Møller, Birger Lindberg & Jensen, Poul Erik, 2014, In: A C S Synthetic Biology. 3, 1, p. 1-12 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Revealing the Secrets of Colletotrichum acutatum with Special Focus on Secondary Metabolism and Population Genetics

    Amby, Daniel Buchvaldt, 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  37. Published

    SVR4 (suppressor of variegation 4) and SVR4-like: two proteins with a role in proper organization of the chloroplast genetic machinery

    Powikrowska, M., Khrouchtchova, A., Martens, Helle Jakobe, Nielsen, A. J. Z., Melonek, J., Schulz, Alexander, Krupinska, K., Rodermel, S. & Jensen, Poul Erik, 2014, In: Physiologia Plantarum. 150, 3, p. 477-492 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Serum albumin promotes ATP-binding cassette transporter-dependent sterol uptake in yeast

    Marek, M., Silvestro, D., Fredslund, M. D., Andersen, T. G. & Pomorski, Thomas Guenther, 2014, In: FEMS Yeast Research. 14, 8, p. 1223-1233 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Synthetic Biology with Cytochromes P450 Using Photosynthetic Chassis

    Gnanasekaran, Thiyagarajan, 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 135 p.

    Research output: Book/Report › Ph.D. thesis › Research

  40. Published

    The calcium-dependent protein kinase CPK28 buffers plant immunity and regulates BIK1 turnover

    Monaghan, J., Matschi, S., Shorinola, O., Rovenich, H., Matei, A., Segonzac, C., Malinovsky, F. G., Rathjen, J. P., MacLean, D., Romeis, T. & Zipfel, C., 2014, In: Cell Host & Microbe. 16, 5, p. 605-615 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    The role of the cell wall in plant immunity

    Malinovsky, F. G., Fangel, J. U. & Willats, W. G. T., 2014, In: Frontiers in Plant Science. 5, 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Tracking developmentally regulated post-synthetic processing of homogalacturonan and chitin using reciprocal oligosaccharide probes

    Mravec, Jozef, Kracun, S. K., Rydahl, M. G., Westereng, B., Miart, F., Clausen, M. H., Fangel, J. U., Daugaard, M., Van Cutsem, P., de Fine Licht, Henrik Hjarvard, Höfte, H., Malinovsky, F. G., Domozych, D. S. & Willats, W. G. T., 2014, In: Development. 141, p. 4841-4850 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    USER-derived cloning methods and their primer design

    Salomonsen, B., Mortensen, U. H. & Halkier, Barbara Ann, 2014, DNA cloning and assembly methods. Humana Press, p. 59-72 13 p. (Methods in Molecular Biology, Vol. 1116).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  44. Published

    Upon bolting the GTR1 and GTR2 transporters mediate transport of glucosinolates to the inflorescence rather than roots

    Andersen, T. G. & Halkier, Barbara Ann, 2014, In: Plant Signalling & Behavior. 9, 1, 2 p., e27740.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Endophytic colonization of tomato plants by the biological control agent Clonostachys rosea

    Høyer, A. K., Jørgensen, Hans Jørgen Lyngs, Amby, Daniel Buchvaldt & Jensen, Birgit, 15 Jun 2014. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  46. Published

    Proton Gradient Regulation5-Like1-Mediated Cyclic Electron Flow Is Crucial for Acclimation to Anoxia and Complementary to Nonphotochemical Quenching in Stress Adaptation

    Kukuczka, B., Magneschi, L., Petroutsos, D., Steinbeck, J., Bald, T., Powikrowska, M., Fufezan, C., Finazzi, G. & Hippler, M., 1 Aug 2014, In: Plant Physiology. 165, 4, p. 1604-1617 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    The Endo-Arabinanase BcAra1 Is a Novel Host-Specific Virulence Factor of the Necrotic Fungal Phytopathogen Botrytis cinerea

    Nafisi, M., Stranne, M., Zhang, L., van Kan, J. A. L. & Sakuragi, Y., 1 Aug 2014, In: Molecular Plant - Microbe Interactions. 27, 8, p. 781-792 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Elucidating the Role of Transport Processes in Leaf Glucosinolate Distribution

    Madsen, S. R., Olsen, C. E., Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 1 Nov 2014, In: Plant Physiology. 166, 3, p. 1450-1462

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Removing the light history signal from normalized variable fluorescence (Fv/Fm) measurements on marine phytoplankton

    From, N., Richardson, Katherine, Mousing, E. A. & Jensen, Poul Erik, 1 Nov 2014, In: Limnology and Oceanography: Methods. 12, 11, p. 776-783 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Promoter-Based Integration in Plant Defense Regulation

    Li, B., Gaudinier, A., Tang, M., Taylor-Teeples, M., Nham, N. T., Ghaffari, C., Benson, D. S., Steinmann, M., Gray, J. A., Brady, S. M. & Kliebenstein, D. J., 1 Dec 2014, In: Plant Physiology. 166, 4, p. 1803-1820 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. 2015
  52. Published

    A functional EXXEK motif is essential for proton coupling and active glucosinolate transport by NPF2.11

    Jørgensen, M. E., Olsen, C. E., Geiger, D., Mirza, Osman Asghar, Halkier, Barbara Ann & Nour-Eldin, Hussam Hassan, 2015, In: Plant and Cell Physiology. 56, 12, p. 2340-2350 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    A laser ablation ICP-MS based method for multiplexed immunoblot analysis: applications to manganese-dependent protein dynamics of photosystem II in barley (Hordeum vulgare L.)

    de Bang, T. C., Petersen, J., Pedas, P. R., Rogowska-Wrzesinska, A., Jensen, O. N., Schjoerring, Jan K., Jensen, Poul Erik, Thelen, J. J. & Husted, Søren, 2015, In: Plant Journal. 83, 3, p. 555-565 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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