Section for Molecular Plant Biology

  1. Published

    Efficient termination of nuclear lncRNA transcription promotes mitochondrial genome maintenance

    du Mee, D. J. M., Ivanov, M., Parker, J. P., Buratowski, S. & Marquardt, Sebastian, 5 Mar 2018, In: eLife. 7, e31989.

    Research output: Contribution to journalJournal articleResearchpeer-review

  2. Published

    The biological function and regulation of non-coding transcription originating from bi-directional promoters

    du Mee, D. J. M., 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 170 p.

    Research output: Book/ReportPh.D. thesisResearch

  3. Published

    Mitochondrial dysfunction induced by variation in the non-coding genome – A proposed workflow to improve diagnostics

    du Mee, D. J. M., Bak, M., Østergaard, Elsebet & Rasmussen, Lene Juel, 2020, In: Mitochondrion. 53, p. 255-259

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    The non-coding RNA Ncr0700/PmgR1 is required for photomixotrophic growth and the regulation of glycogen accumulation in the cyanobacterium Synechocystis sp. PCC 6803

    de Porcellinis, A. J., Klähn, S., Rosgaard, L., Kirsch, R., Gutekunst, K., Georg, J., Hess, W. R. & Sakuragi, Y., 2016, In: Plant and Cell Physiology. 57, 10, p. 2091-2103 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Overexpression of bifunctional fructose-1,6-bisphosphatase/sedoheptulose-1,7-bisphosphatase leads to enhanced photosynthesis and global reprogramming of carbon metabolism in Synechococcus sp PCC 7002

    de Porcellinis, A. J., Nørgaard, H., Furelos Brey, L. M., Erstad, S. M., Jones, P. R., Heazlewood, J. L. & Sakuragi, Y., 2018, In: Metabolic Engineering. 47, p. 170-183 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Multiplexed quantification of plant thylakoid proteins on western blots using lanthanide-labeled antibodies and laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS)

    de Bang, T. C., Pedas, P., Schjoerring, Jan K., Jensen, Poul Erik & Husted, Søren, 2013, In: Analytical Chemistry. 85, 10, p. 5047-5054 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    A laser ablation ICP-MS based method for multiplexed immunoblot analysis: applications to manganese-dependent protein dynamics of photosystem II in barley (Hordeum vulgare L.)

    de Bang, T. C., Petersen, J., Pedas, P. R., Rogowska-Wrzesinska, A., Jensen, O. N., Schjoerring, Jan K., Jensen, Poul Erik, Thelen, J. J. & Husted, Søren, 2015, In: Plant Journal. 83, 3, p. 555-565 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Histone chaperone ASF1 mediates H3.3-H4 deposition in Arabidopsis

    Zhong, Z., Wang, Y., Wang, M., Yang, F., Thomas, Quentin, Xue, Y., Zhang, Y., Liu, W., Jami-Alahmadi, Y., Xu, L., Feng, S., Marquardt, Sebastian, Wohlschlegel, J. A., Ausin, I. & Jacobsen, S. E., 2022, In: Nature Communications. 13, 15 p., 6970.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    ABA homeostasis and long-distance translocation are redundantly regulated by ABCG ABA importers

    Zhang, Y., Kilambi, H. V., Liu, J., Bar, H., Lazary, S., Egbaria, A., Ripper, D., Charrier, L., Belew, Zeinu Mussa, Wulff, N., Damodaran, S., Nour-Eldin, Hussam Hassan, Aharoni, A., Ragni, L., Strader, L., Sade, N., Weinstain, R., Geisler, M. & Shani, E., 2021, In: Science Advances. 7, 43, 18 p., eabf6069.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    A transportome-scale amiRNA-based screen identifies redundant roles of Arabidopsis ABCB6 and ABCB20 in auxin transport

    Zhang, Y., Nasser, V., Pisanty, O., Omary, M., Wulff, N., Di Donato, M., Tal, I., Hauser, F., Hao, P., Roth, O., Fromm, H., Schroeder, J. I., Geisler, M., Nour-Eldin, Hussam Hassan & Shani, E., 2018, In: Nature Communications. 9

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Overexpression of three glucosinolate biosynthesis genes in Brassica napus identifies enhanced resistance to Sclerotinia sclerotiorum and Botrytis cinerea

    Zhang, Y., Huai, D., Yang, Q., Cheng, Y., Ma, M., Kliebenstein, D. J. & Zhou, Y., 2015, In: P L o S One. 10, 10, 17 p., e0140491.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    The conserved transcription factors, MYB115 and MYB118, control expression of the newly evolved benzoyloxy glucosinolate pathway in Arabidopsis thaliana

    Zhang, Y., Li, B., Huai, D., Zhou, Y. & Kliebenstein, D. J., 2015, In: Frontiers in Plant Science. 6, 19 p., 343.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    A CRISPR way for accelerating improvement of food crops

    Zhang, Yi, Pribil, Mathias, Palmgren, Michael & Gao, C., 2020, In: Nature Food. 1, 4, p. 200-205 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Plastic transcriptomes stabilize immunity to pathogen diversity: the jasmonic acid and salicylic acid networks within the Arabidopsis/Botrytis pathosystem

    Zhang, W., Corwin, J. A., Copeland, D., Feusier, J., Eshbaugh, R., Chen, F., Atwell, S. & Kliebenstein, D. J., 2017, In: Plant Cell. 29, 11, p. 2727-2752 26 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Isolate dependency of Brassica rapa resistance QTLs to Botrytis cinerea

    Zhang, W., Kwon, S., Chen, F. & Kliebenstein, D. J., 2016, In: Frontiers in Plant Science. 7, 13 p., 161.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Plant-necrotroph co-transcriptome networks illuminate a metabolic battlefield

    Zhang, W., Corwin, J. A., Copeland, D. H., Feusier, J., Eshbaugh, R., Cook, D. E., Atwell, S. & Kliebenstein, D. J., 2019, In: eLife. 8, e44279.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Glucosinolate Catabolism Maintains Glucosinolate Profiles and Transport in Sulfur-Starved Arabidopsis

    Zhang, L., Kawaguchi, R., Enomoto, T., Nishida, S., Burow, Meike & Maruyama-nakashita, A., 2023, In: Plant and Cell Physiology. 64, 12, p. 1534-1550

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Self-Assembly of Nanofilaments in Cyanobacteria for Protein Co-localization

    Zedler, J. A. Z., Schirmacher, A. M., Russo, D. A., Hodgson, L., Gundersen, E., Matthes, A., Frank, S., Verkade, P. & Jensen, Poul Erik, 2023, In: ACS Nano. 17, 24, p. 25279-25290 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Parasitic plant small RNA analyses unveil parasite-specific signatures of microRNA retention, loss, and gain

    Zangishei, Z., Annacondia López, María Luz, Gundlach, H., Didriksen, A., Bruckmüller, J., Salari, H., Krause, K. & Martinez, G., 2022, In: Plant Physiology. 190, 2, p. 1242-1259

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    SNOWY COTYLEDON 2 promotes chloroplast development and has a role in leaf variegation in both Lotus japonicus and Arabidopsis thaliana

    Zagari, N., Sandoval Ibáñez, O. A., Sandal, N., Su, J., Rodriguez-Concepcion, M., Stougaard, J., Pribil, Mathias, Leister, D. M. & Pulido, P., 2017, In: Molecular Plant. 10, 5, p. 721-734 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Effects of lithium on morpho-physiological and ionomic traits in Cannabis sativa L. microshoots under in vitro conditions

    Zacchini, M., Gullotta, Giorgio, D'Onofrio, G., Bertolotto, P., Massimi, L. & Pietrini, F., 2023, In: Plant Cell, Tissue and Organ Culture. 155, p. 873-882

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Sugar transporters enable a leaf beetle to accumulate plant defense compounds

    Yang, Z. L., Nour-Eldin, Hussam Hassan, Hänniger, S., Reichelt, M., Crocoll, C., Seitz, F., Vogel, H. & Beran, F., 2021, In: Nature Communications. 12, 1, 12 p., 2658.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Transcript profiling of a bitter variety of narrow-leafed lupin to discover alkaloid biosynthetic genes

    Yang, T., Nagy, I., Mancinotti, Davide, Otterbach, S. L., Andersen, T. B., Motawie, Mohammed Saddik, Asp, T. & Geu-Flores, Fernando, 2017, In: Journal of Experimental Botany. 68, 20, p. 5527-5537 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Unraveling incompatibility between wheat and the fungal pathogen Zymoseptoria tritici through apoplastic proteomics

    Yang, F., Li, W., Derbyshire, M., Larsen, M. R., Rudd, J. J. & Palmisano, G., 2015, In: B M C Genomics. 16, 12 p., 362.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Transcriptional reprogramming of wheat and the hemibiotrophic pathogen Septoria tritici during two phases of the compatible interaction

    Yang, F., Li, W. & Jørgensen, Hans Jørgen Lyngs, 2013, In: P L o S One. 8, 11, 15 p., e81606.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Genome-wide analysis of small RNAs in the wheat pathogenic fungus Zymoseptoria tritici

    Yang, F., 2015, In: Fungal Biology. 119, 7, p. 631-640 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Battle through signaling between wheat and the fungal pathogen Septoria tritici revealed by proteomics and phosphoproteomics

    Yang, F., Braga, M. N. D. M., Larsen, M. R., Jørgensen, Hans Jørgen Lyngs & Palmisano, G., 2013, In: Molecular and Cellular Proteomics. 12, p. 2497-2508 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Published

    Comprehensive proteomic analysis of the wheat pathogenic fungus Zymoseptoria tritici

    Yang, F. & Yin, Q., 2016, In: Proteomics. 16, 1, p. 98-101 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    Fusarium graminearum and its interactions with cereal heads: studies in the proteomics era

    Yang, F., Jacobsen, S., Jørgensen, Hans Jørgen Lyngs, Collinge, David B., Svensson, B. & Finnie, C. S., 2013, In: Frontiers in Plant Science. 4, 37

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    CCR1, an enzyme required for lignin biosynthesis in Arabidopsis, mediates cell proliferation exit for leaf development

    Xue, J., Luo, D., Xu, Deyang, Zeng, M., Cui, X., Li, L. & Huang, H., 2015, In: Plant Journal. 83, 3, p. 375-387 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Rhizosecretion of stele-synthesized glucosinolates and their catabolites requires GTR-mediated import in Arabidopsis

    Xu, Deyang, Hanschen, F. S., Witzel, K., Kjeldgaard-Nintemann, Sebastian J, Nour-Eldin, Hussam Hassan, Schreiner, M. & Halkier, Barbara Ann, 2017, In: Journal of Experimental Botany. 68, 12, p. 3205-3214 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    GTR-Mediated Radial Import Directs Accumulation of Defensive Glucosinolates to Sulfur-Rich Cells in the Phloem Cap of Arabidopsis Inflorescence Stem

    Xu, Deyang, Hunziker, P., Koroleva, O., Blennow, Andreas, Crocoll, C., Schulz, Alexander, Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2019, In: Molecular Plant. 12, 11, p. 1474-1484

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    The ins and outs of transporters at plasma membrane and tonoplast in plant specialized metabolism: [Correction]

    Xu, Deyang & Halkier, Barbara Ann, 2022, In: Natural Product Reports. 39, 7, p. 1483-1491

    Research output: Contribution to journalReviewResearchpeer-review

  34. Published

    the role of GTR importers in rhizosecretion of glucosinolates in arabidopsis

    Xu, Deyang, Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2016.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  35. Published

    Export of defensive glucosinolates is key for their accumulation in seeds

    Xu, Deyang, Sanden, Niels Christian Holm, Hansen, Line Lykke, Belew, Zeinu Mussa, Madsen, S. R., Meyer, L., Jørgensen, M. E., Hunziker, P., Veres, D., Crocoll, C., Schulz, Alexander, Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2023, In: Nature. 617, p. 132-138

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    GET-Mediated Export of Defensive Glucosinolates is Key for Seed Accumulation

    Xu, Deyang, Sanden, Niels Christian Holm, Hansen, Line Lykke, Belew, Zeinu Mussa, Madsen, S. R., Meyer, L., Jørgensen, M. E., Hunziker, P., Veres, D., Crocoll, C., Schulz, Alexander, Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2023.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  37. Published

    Functional expression and characterization of plant ABC transporters in Xenopus laevis oocytes for transport engineering purposes

    Xu, Deyang, Veres, D., Belew, Zeinu Mussa, Olsen, C. E., Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2016, Synthetic biology and metabolic engineering in plants and microbes : Part B: Plant metabolism. p. 207-224 8 p. (Methods in Enzymology, Vol. 576).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  38. Published

    Harnessing beneficial microbes from Danish natural soils to biostimulate plant nutrition

    Xu, Deyang, Dethier, L. & Halkier, Barbara Ann, 13 Nov 2022.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  39. Published

    An Optimized Screen Reduces the Number of GA Transporters and provides Insights into NPF Substrate Determinants

    Wulff, N., Ernst, H. A., Jørgensen, M. E., Lambertz, S., Maierhofer, T., Belew, Zeinu Mussa, Crocoll, C., Motawia, M. S., Geiger, D., Jørgensen, Flemming Steen, Mirza, Osman Asghar & Nour-Eldin, Hussam Hassan, 2019, bioRxiv.

    Research output: Working paperPreprintResearch

  40. Published

    An Optimized Screen Reduces the Number of GA Transporters and Provides Insights Into Nitrate Transporter 1/Peptide Transporter Family Substrate Determinants

    Wulff, N., Ernst, H. A., Jørgensen, M. E., Lambertz, S., Maierhofer, T., Belew, Zeinu Mussa, Crocoll, C., Motawie, Mohammed Saddik, Geiger, D., Jørgensen, Flemming Steen, Mirza, Osman Asghar & Nour-Eldin, Hussam Hassan, 3 Oct 2019, In: Frontiers in Plant Science. 10, 18 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Unravelling the Transport Mechanism of NPF Transporters

    Wulff, N., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/ReportPh.D. thesisResearch

  42. Published

    Cyanobacteria as a Platform for the High-Value Chemicals Production

    Wlodarczyk, A. J., 2016, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 127 p.

    Research output: Book/ReportPh.D. thesisResearch

  43. Published

    Metabolic engineering of light-driven cytochrome P450 dependent pathways into Synechocystis sp. PCC 6803

    Wlodarczyk, A. J., Gnanasekaran, Thiyagarajan, Nielsen, A. J. Z., Nokolunga, N., Mellor, Silas Busck, Manja, L., Frederik Bang Thøfner, J., Olsen, C. E., Motawie, Mohammed Saddik, Burow, Meike, Pribil, Mathias, Feussner, I., Møller, Birger Lindberg & Jensen, Poul Erik, 2016, In: Metabolic Engineering. 33, p. 1-11 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    Novel functions of plant cyclin-dependent kinase inhibitors, ICK1/KRP1, can act non-cell-autonomously and inhibit entry into mitosis

    Weinl, C., Marquardt, Sebastian, Kuijt, S. J. H., Nowack, M. K., Jakoby, M. J., Hülskamp, M. & Schnittger, A., Jun 2005, In: Plant Cell. 17, 6, p. 1704-22 19 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    Identification of genes involved in shea butter biosynthesis from Vitellaria paradoxa fruits through transcriptomics and functional heterologous expression

    Wei, Y., Ji, B., Siewers, V., Xu, Deyang, Halkier, Barbara Ann & Nielsen, J., May 2019, In: Applied Microbiology and Biotechnology. 103, 9, p. 3727–3736

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    Evolution in regulatory networks coordinating development and defense chemistry

    Weber, K., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/ReportPh.D. thesisResearch

  47. Published

    Nitrogen - essential macronutrient and signal controlling flowering time

    Weber, K. & Burow, Meike, 2018, In: Physiologia Plantarum. 162, 2, p. 251-260 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Engineering and optimization of the 2-phenylethylglucosinolate production in Nicotiana benthamiana by combining biosynthetic genes from Barbarea vulgaris and Arabidopsis thaliana

    Wang, Cuiwei, Crocoll, C., Agerbirk, Niels & Halkier, Barbara Ann, 2021, In: Plant Journal. 106, 4, p. 978-992

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Identification and heterologous expression of biosynthetic genes for glucosinolate production

    Wang, Cuiwei, 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 165 p.

    Research output: Book/ReportPh.D. thesisResearch

  50. Published

    Characterization of Arabidopsis CYP79C1 and CYP79C2 by Glucosinolate Pathway Engineering in Nicotiana benthamiana Shows Substrate Specificity Toward a Range of Aliphatic and Aromatic Amino Acids

    Wang, Cuiwei, Dissing, M. M., Agerbirk, Niels, Crocoll, C. & Halkier, Barbara Ann, 2020, In: Frontiers in Plant Science. 11, 13 p., 57.

    Research output: Contribution to journalJournal articleResearchpeer-review

Previous 1 2 3 4 5 6 7 8 ...10 Next