Section for Molecular Plant Biology

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  1. 2019
  2. Published

    Identification and heterologous expression of biosynthetic genes for glucosinolate production

    Wang, Cuiwei, 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 165 p.

    Research output: Book/Report › Ph.D. thesis › Research

  3. Published

    Evolution in regulatory networks coordinating development and defense chemistry

    Weber, K., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  4. Published

    Identification of genes involved in shea butter biosynthesis from Vitellaria paradoxa fruits through transcriptomics and functional heterologous expression

    Wei, Y., Ji, B., Siewers, V., Xu, Deyang, Halkier, Barbara Ann & Nielsen, J., May 2019, In: Applied Microbiology and Biotechnology. 103, 9, p. 3727–3736

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    An Optimized Screen Reduces the Number of GA Transporters and Provides Insights Into Nitrate Transporter 1/Peptide Transporter Family Substrate Determinants

    Wulff, N., Ernst, H. A., Jørgensen, M. E., Lambertz, S., Maierhofer, T., Belew, Zeinu Mussa, Crocoll, C., Motawie, Mohammed Saddik, Geiger, D., Jørgensen, Flemming Steen, Mirza, Osman Asghar & Nour-Eldin, Hussam Hassan, 3 Oct 2019, In: Frontiers in Plant Science. 10, 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    An Optimized Screen Reduces the Number of GA Transporters and provides Insights into NPF Substrate Determinants

    Wulff, N., Ernst, H. A., Jørgensen, M. E., Lambertz, S., Maierhofer, T., Belew, Zeinu Mussa, Crocoll, C., Motawia, M. S., Geiger, D., Jørgensen, Flemming Steen, Mirza, Osman Asghar & Nour-Eldin, Hussam Hassan, 2019, bioRxiv.

    Research output: Working paper › Preprint › Research

  7. Published

    Unravelling the Transport Mechanism of NPF Transporters

    Wulff, N., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  8. Published

    GTR-Mediated Radial Import Directs Accumulation of Defensive Glucosinolates to Sulfur-Rich Cells in the Phloem Cap of Arabidopsis Inflorescence Stem

    Xu, Deyang, Hunziker, P., Koroleva, O., Blennow, Andreas, Crocoll, C., Schulz, Alexander, Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2019, In: Molecular Plant. 12, 11, p. 1474-1484

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Plant-necrotroph co-transcriptome networks illuminate a metabolic battlefield

    Zhang, W., Corwin, J. A., Copeland, D. H., Feusier, J., Eshbaugh, R., Cook, D. E., Atwell, S. & Kliebenstein, D. J., 2019, In: eLife. 8, e44279.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. 2018
  11. Published

    Glucosinolate turnover in Brassicales species to an oxazolidin-2-one, formed via the 2-thione and without formation of thioamide

    Agerbirk, Niels, Matthes, A., Erthmann, P. Ø., Ugolini, L., Cinti, S., Lazaridi, E., Nuzillard, J., Mueller, C., Bak, Søren, Rollin, P. & Lazzeri, L., 2018, In: Phytochemistry. 153, p. 79-93

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Comparison of the relative potential for epigenetic and genetic variation to contribute to trait stability

    Aller, Emma Sofie Timm, Jagd, L. M., Kliebenstein, D. J. & Burow, Meike, 1 May 2018, In: G3: Genes, Genomes, Genetics (Bethesda). 8, 5, p. 1733-1746 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Synthetic Biology of Chlamydomonas reinhardtii: Robust molecular tools for new bioengineering chassis

    Bakowski, K., 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  14. Published

    How to prove the existence of metabolons?

    Bassard, J. A. & Halkier, Barbara Ann, 2018, In: Phytochemistry Reviews. 17, 2, p. 211-227 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Approaches to identify and characterize microProteins and their potential uses in biotechnology

    Bhati, K. K., Blaakmeer, A. S., Botterweg Paredes, E., Dolde, U. M., qmd783, qmd783, Hong, S., Rodrigues, V. L., Straub, D., Sun, B. & Wenkel, Stephan, 2018, In: Cellular and Molecular Life Sciences. 75, 14, p. 2529-2536

    Research output: Contribution to journal › Review › Research › peer-review

  16. Published

    Glutathione transferases catalyze recycling of auto-toxic cyanogenic glucosides in sorghum

    Bjarnholt, Nanna, Neilson, Elizabeth Heather Jakobsen, Crocoll, C., Jørgensen, Kirsten, Motawie, Mohammed Saddik, Olsen, C. E., Dixon, D. P., Edwards, R. & Møller, Birger Lindberg, 2018, In: Plant Journal. 94, 6, p. 1109-1125

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    The impacts of phosphorus deficiency on the photosynthetic electron transport chain

    Carstensen, A., Herdean, A., Schmidt, Sidsel Birkelund, Sharma, A., Spetea, C., Pribil, Mathias & Husted, Søren, 2018, In: Plant Physiology. 177, p. 271-284 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Birth of a photosynthetic chassis: a MoClo toolkit enabling synthetic biology in the microalga Chlamydomonas reinhardtii

    Crozet, P., Navarro, F. J., Willmund, F., Mehrshahi, P., Bakowski, K., Lauersen, K. J., Perez-Perez, M-E., Auroy, P., Rovira, A. G., Sauret-Gueto, S., Niemeyer, J., Spaniol, B., Theis, J., Troesch, R., Westrich, L-D., Vavitsas, K., Baier, T., Huebner, W., de Carpentier, F., Cassarini, M. & 13 others, Danon, A., Henri, J., Marchand, C. H., de Mia, M., Sarkissian, K., Baulcombe, D. C., Peltier, G., Crespo, J., Kruse, O., Jensen, Poul Erik, Schroda, M., Smith, A. G. & Lemaire, S. D., 21 Sep 2018, In: A C S Synthetic Biology. 7, 9, p. 2074-2086 13 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  19. Published

    Co-expression of squalene epoxidases with triterpene cyclases boosts production of triterpenoids in plants and yeast

    Dong, L., Pollier, J., Bassard, J., Ntallas, G., Almeida, A., Lazaridi, E., Khakimov, Bekzod, Arendt, P., de Oliveira, L. S., Lota, F., Goossens, A., Michoux, F. & Bak, Søren, 2018, In: Metabolic Engineering. 49, p. 1-12

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Easy and Efficient Permeabilization of Cyanobacteria for in vivo Enzyme Assays Using B-PER

    Erstad, S. M. & Sakuragi, Y., 2018, In: Bio-protocol. 8, 01, p. 1-10 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Digital Imaging Combined with Genome-Wide Association Mapping Links Loci to Plant-Pathogen Interaction Traits

    Fordyce, R. F., Soltis, N. E., Caseys, C., Gwinner, R., Corwin, J. A., Atwell, S., Copeland, D., Feusier, J., Subedy, A., Eshbaugh, R. & Kliebenstein, D. J., 2018, In: Plant Physiology. 178, 3, p. 1406-1422

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    The intracellular localization of the vanillin biosynthetic machinery in pods of Vanilla planifolia

    Gallage, N. J., Jørgensen, Kirsten, Janfelt, Christian, Nielsen, A. J. Z., Naake, T., Dunski, E., Dalsten, L., Grisoni, M. & Møller, Birger Lindberg, 2018, In: Plant and Cell Physiology. 59, 2, p. 304-318 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Transcriptional regulation of nitrogen-associated metabolism and growth

    Gaudinier, A., Rodriguez-Medina, J., Zhang, L., Olson, A., Liseron-Monfils, C., Bågman, A. M., Foret, J., Abbitt, S., Tang, M., Li, B., Runcie, D. E., Kliebenstein, D. J., Shen, B., Frank, M. J., Ware, D. & Brady, S. M., 8 Nov 2018, In: Nature. 563, 7730, p. 259-264

    Research output: Contribution to journal › Letter › Research › peer-review

  24. Published

    Pausing of chloroplast ribosomes is induced by multiple features and is linked to the assembly of photosynthetic complexes

    Gawronski, P., Jensen, Poul Erik, Karpinski, S., Leister, D. M. & Scharff, L., 2018, In: Plant Physiology. 176, 3, p. 2557-2569 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Plant exosomes: using an unconventional exit to prevent pathogen entry?

    Hansen, Line Lykke & Nielsen, Mads Eggert, 2018, In: Journal of Experimental Botany. 69, 1, p. 59-68 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Biosynthesis of bioactive diterpenoids in the medicinal plant Vitex agnus-castus

    Heskes, A., Sundram, T. C. M., Boughton, B. A., Bjerg Jensen, N., Hansen, N. L., Crocoll, C., Cozzi, F., Rasmussen, Simon, Hamberger, B., Hamberger, B. R., Stærk, Dan, Møller, Birger Lindberg & Pateraki, Irini, 2018, In: Plant Journal. 93, p. 943-958 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Structural Investigation of Photosynthetic Membrane Using Small-Angle Scattering

    Jakubauskas, D., 2018, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  28. Published

    AtRsgA from Arabidopsis thaliana is important for maturation of the small subunit of the chloroplast ribosome

    Janowski, M., Zoschke, R., Scharff, L., Martinez Jaime, S., Ferrari, C., Proost, S., Ng Wei Xiong, J., Omranian, N., Musialak-Lange, M., Nikoloski, Z., Graf, A., Schöttler, M. A., Sampathkumar, A., Vaid, N. & Mutwil, M., 2018, In: The Plant Journal. 96, 2, p. 404-420

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Coupling photosynthetic electron transport to metabolic engineering

    Jensen, Poul Erik, 2018, In: In Vitro Cellular & Developmental Biology - Plant. 54, Suppl. 1, p. S107 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research

  30. Published

    Glucosinolates

    Jeschke, V. & Burow, Meike, 17 May 2018, eLS. Wiley, p. 1-8 8 p. (eLS).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  31. Published

    Transcriptional read-through of the long non-coding RNA SVALKA governs plant cold acclimation

    Kindgren, P. R., Ard, R., Ivanov, M. & Marquardt, Sebastian, 2018, In: Nature Communications. 9, p. 1-11 4561.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Biological activity and LC-MS/MS profiling of extracts from the Australian medicinal plant Acacia ligulata (Fabaceae)

    Knudsen, D. J., Simpson, B. S., Ndi, C. P., Jäger, A., Crocoll, C., Møller, Birger Lindberg, Weinstein, P. & Semple, S. J., 2018, In: Natural Product Research. 32, 5, p. 576-581 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis

    Li, B., Tang, M., Nelson, A., Caligagan, H., Zhou, X., Clark-Wiest, C., Ngo, R., Brady, S. M. & Kliebenstein, D. J., 2018, In: Plant Cell. 30, 1, p. 178-195

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Human intrinsic factor expression for bioavailable vitamin B12 enrichment in microalgae

    Lima, S., Webb, C. L., Deery, E., Robinson, C. & Zedler, J. A. Z., 2018, In: Biology. 7, 1, 13 p., 19.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Non-photosynthetic plastids as hosts for metabolic engineering

    Mellor, Silas Busck, Behrendorff, J. B. Y. H., Nielsen, A. J. Z., Jensen, Poul Erik & Pribil, Mathias, 2018, In: Essays in Biochemistry. 62, 1, p. 41-50 10 p.

    Research output: Contribution to journal › Review › Research › peer-review

  36. Published

    Invisible detergents for structure determination of membrane proteins by small-angle neutron scattering

    Midtgaard, S. R., Darwish, T. A., Pedersen, M. C., Huda, P., Larsen, A. H., Jensen, G. V., Kynde, S. A. R., Skar-Gislinge, N., Nielsen, A. J. Z., Olesen, C., Blaise, M., Dorosz, J. J., Thorsen, T. S., Venskutonytė, R., Krintel, C., Møller, J. V., Frielinghaus, H., Gilbert, E. P., Martel, A., Kastrup, J. S. J. & 3 others, Jensen, P. E., Nissen, P. & Arleth, Lise, Jan 2018, In: F E B S Journal. 285, 2, p. 357-371 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Structural and functional evolution of R2R3 MYB transcription factors

    Millard, P. S., 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  38. Published

    Effects of gamma irradiation and comparison of different extraction methods on sesquiterpene lactone yields from the medicinal plant Thapsia garganica L. (Apiaceae)

    Mohamed Ibrahim, A. M., Martinez-Swatson, K. A., Benkaci-Ali, F., Cozzi, F., Zoulikha, F. & Simonsen, H. T., 2018, In: Journal of Applied Research on Medicinal and Aromatic Plants. 8, p. 26-32 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    The Role of the Glucosinolate-Myrosinase System in Mediating Greater Resistance of Barbarea verna than B. vulgaris to Mamestra brassicae Larvae

    Mueller, C., Schulz, M., Pagnotta, E., Ugolini, L., Yang, T., Matthes, A., Lazzeri, L. & Agerbirk, Niels, 2018, In: Journal of Chemical Ecology. 44, 12, p. 1190-1205

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Localization of the glucosinolate biosynthetic enzymes reveals distinct spatial patterns for the biosynthesis of indole and aliphatic glucosinolates

    Kjeldgaard-Nintemann, Sebastian J, Hunziker, P., Andersen, T. G., Schulz, Alexander, Burow, Meike & Halkier, Barbara Ann, 2018, In: Physiologia Plantarum. 163, 2, p. 138-154 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Harvesting environmental microalgal blooms for remediation and resource recovery: a laboratory scale investigation with economic and microbial community impact assessment

    Pandhal, J., Choon, W., Kapoore, R., Russo, D. A., Hanotu, J., Wilson, I. A. G., Desai, P., Bailey, M., Zimmerman, W. J. & Ferguson, A. S., 2018, In: Biology. 7, 1, 16 p., 4.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Characterisation of Arabidopsis thaliana ATP-Dependent Phosphofructokinases and a Putative Myristoylation Site on AtF2KP

    Perby, L. K., 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  43. Published

    Biotechnological approaches in glucosinolate production

    Petersen, A., Wang, Cuiwei, Crocoll, C. & Halkier, Barbara Ann, 2018, In: Journal of Integrative Plant Biology. 60, 12, p. 1231-1248

    Research output: Contribution to journal › Review › Research › peer-review

  44. Published

    Fine-tuning of photosynthesis requires CURVATURE THYLAKOID1-mediated thylakoid plasticity

    Pribil, Mathias, Sandoval Ibáñez, O. A., Xu, W., Sharma, A., Labs, M., Liu, Q., Galgenmüller, C., Schneider, T., Wessels, M., Matsubara, S., Jansson, S., Wanner, G. & Leister, D., 2018, In: Plant Physiology. 176, 3, p. 2351-2364 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    CHLOROPLAST RIBOSOME ASSOCIATED supports translation under stress and interacts with the ribosomal 30S subunit

    Pulido, P., Zagari, N., Manavski, N., Gawronski, P., Matthes, A., Scharff, L., Meurer, J. & Leister, D. M., 2018, In: Plant Physiology. 177, 4, p. 1539-1554 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    The bHLH transcription factor ILR3 modulates multiple stress responses in Arabidopsis

    Samira, R., Li, B., Kliebenstein, D. J., Li, C., Davis, E., Gillikin, J. W. & Long, T. A., 2018, In: Plant Molecular Biology. 97, 4-5, p. 297-309 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Functional characterization of CURT1- complexes in A. thaliana: Role in thylakoid plasticity and chloroplast biogenesis

    Sandoval Ibáñez, O. A., 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  48. Published

    Differential roles of glucosinolates and camalexin at different stages of Agrobacterium-mediated transformation

    Shih, P., Chou, S., Mueller, C., Halkier, Barbara Ann, Deeken, R. & Lai, E., 2018, In: Molecular Plant Pathology. 19, 8, p. 1956-1970 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Vitamin D-5 in Arabidopsis thaliana

    Silvestro, D., Villette, C., Delecolle, J., Olsen, C. E., Motawie, Mohammed Saddik, Geoffroy, P., Miesch, M., Jensen, Poul Erik, Heintz, D. & Schaller, H., 2018, In: Scientific Reports. 8, p. 1-8 16348.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Harnessing transcription for bioproduction in cyanobacteria

    Stensjö, K., Vavitsas, K. & Tyystjärvi, T., 2018, In: Physiologia Plantarum. 162, 2, p. 148-155 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    TBL10 is required for O-acetylation of pectic rhamnogalacturonan-I in Arabidopsis thaliana

    Stranne, M., Ren, Y., Fimognari, L., Birdseye, D., Yan, J., Bardor, M., Mollet, J., Komatsu, T., Kikuchi, J., Scheller, H. V. & Sakuragi, Y., 2018, In: Plant Journal. 96, 4, p. 772-785

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Dynamic Modeling of Indole Glucosinolate Hydrolysis and Its Impact on Auxin Signaling

    Vik, D., Mitarai, Namiko, Wulff, N., Halkier, Barbara Ann & Burow, Meike, 2018, In: Frontiers in Plant Science. 9, 16 p., 550.

    Research output: Contribution to journal › Journal article › Research › peer-review

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