- 2020
- Published
Pathogen Genetic Control of Transcriptome Variation in the Arabidopsis thaliana – Botrytis cinerea Pathosystem
Soltis, N. E., Caseys, C., Zhang, W., Corwin, J. A., Atwell, S. & Kliebenstein, D. J., 2020, In: Genetics. 215, 1, p. 253-266Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dissection of microProtein Signaling in Plant Development
Sun, B., 2020, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 179 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Characterization of Arabidopsis thaliana Promoter Bidirectionality and Antisense RNAs by Inactivation of Nuclear RNA Decay Pathways
Thieffry, A., Vigh, Maria Louisa, Lange, Jette Bornholdt, Ivanov, M., Brodersen, Peter & Sandelin, Albin Gustav, 2020, In: The Plant Cell. 32, 6, p. 1845-1867 23 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The γ-hydroxybutyric acid (GHB) analogue NCS-382 is a substrate for both monocarboxylate transporters subtypes 1 and 4
Thiesen, L., Belew, Zeinu Mussa, Griem-Krey, Nane, Pedersen, Stine Helene Falsig, Crocoll, C., Nour-Eldin, Hussam Hassan & Wellendorph, Petrine, 15 Feb 2020, In: European Journal of Pharmaceutical Sciences. 143, p. 1-9 105203.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A flavin-dependent monooxygenase catalyzes the initial step in cyanogenic glycoside synthesis in ferns
Thodberg, S., Sørensen, Mette, Bellucci, M., Crocoll, C., Bendtsen, Amalie Kofoed, Nelson, D. R., Motawie, Mohammed Saddik, Møller, Birger Lindberg & Neilson, Elizabeth Heather Jakobsen, 2020, In: Communications Biology . 3, 11 p., 507.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transcript isoform sequencing reveals widespread promoter-proximal transcriptional termination in Arabidopsis
Thomas, Quentin, Ard, R., Liu, J., Li, B., Wang, J., Pelechano, V. & Marquardt, Sebastian, 2020, In: Nature Communications. 11, 1, p. 1-15Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The synergy between LPMOs and cellulases in enzymatic saccharification of cellulose is both enzyme- and substrate-dependent
Tokin, Radina, Ipsen, J. Ø., Westh, P. & Johansen, Katja Salomon, 1 Oct 2020, In: Biotechnology Letters. 42, 10, p. 1975-1984 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of Arabidopsis CYP79C1 and CYP79C2 by Glucosinolate Pathway Engineering in Nicotiana benthamiana Shows Substrate Specificity Toward a Range of Aliphatic and Aromatic Amino Acids
Wang, Cuiwei, Dissing, M. M., Agerbirk, Niels, Crocoll, C. & Halkier, Barbara Ann, 2020, In: Frontiers in Plant Science. 11, 13 p., 57.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A CRISPR way for accelerating improvement of food crops
Zhang, Yi, Pribil, Mathias, Palmgren, Michael & Gao, C., 2020, In: Nature Food. 1, 4, p. 200-205 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mitochondrial dysfunction induced by variation in the non-coding genome – A proposed workflow to improve diagnostics
du Mee, D. J. M., Bak, M., Østergaard, Elsebet & Rasmussen, Lene Juel, 2020, In: Mitochondrion. 53, p. 255-259Research output: Contribution to journal › Journal article › Research › peer-review
- 2019
- Published
Sulfur metabolism in Allium cepa is hardly affected by chloride and sulfate salinity
Aghajanzadeh, T. A., Reich, M., Hawkesford, M. J. & Burow, Meike, 2019, In: Archives of Agronomy and Soil Science. 65, 7, p. 945-956Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Growth under high light and elevated temperature affects metabolic responses and accumulation of health-promoting metabolites in kale varieties
Alegre, S., Pascual, J., Trotta, A., Gollan, P. J., Yang, W., Yang, B., Aro, E., Burow, Meike & Kangasjärvi, S., 2019, Cold Spring Harbor Laboratory, 51 p. (bioRxiv).Research output: Working paper › Preprint › Research
- Published
Anthocyanin elicitation for bio-sustainable colourant production in carrot
Barba-Espın, G., Lütken, Henrik Vlk, Glied, S., Crocoll, C., Joernsgaard, B. & Müller, Renate, 2019, In: Acta Horticulturae. 1242, p. 87-92Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The effect of modulating the quantity of enzymes in a model ethanol pathway on metabolic flux in Synechocystis sp. PCC 6803
Bartasun, P., Prandi, N., Storch, M., Aknin, Y., Bennett, M., Palma, A., Baldwin, G., Sakuragi, Y., Jones, P. R. & Rowland, J., 2019, In: PeerJ. 2019, 7, p. 1-18 7529.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Membrane-Bound Protein Scaffolding in Diverse Hosts Using Thylakoid Protein CURT1A
Behrendorff, J. B. Y. H., Sandoval-Ibañez, O. A., Sharma, A. & Pribil, Mathias, 19 Apr 2019, In: A C S Synthetic Biology. 8, 4, p. 611-620Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transport Engineering in Synthetic Biology: Identification and characterization of phlorizin transporters enables increased production in yeast
Belew, Zeinu Mussa, 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Generation of microalga Chlamydomonas reinhardtii expressing shrimp antiviral dsRNA without supplementation of antibiotics
Charoonnart, P., Worakajit, N., Zedler, J. A. Z., Meetam, M., Robinson, C. & Saksmerprome, V., 2019, In: Scientific Reports. 9, p. 1-8 3164.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
K+ and Cl− channels/transporters independently fine-tune photosynthesis in plants
Dukic, E., Herdean, A., Cheregi, O., Sharma, A., Nziengui, H., Dmitruk, D., Solymosi, K., Pribil, Mathias & Spetea, C., 2019, In: Scientific Reports. 9, p. 1-12 8639.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deletion of biosynthetic genes, specific SNP patterns and differences in transcript accumulation cause variation in hydroxynitrile glucoside content in barley cultivars
Ehlert, M., Jagd, L. M., Braumann, I., Dockter, C., Crocoll, C., Motawie, Mohammed Saddik, Møller, Birger Lindberg & Lyngkjær, M. F., 5 Apr 2019, In: Scientific Reports. 9, p. 1-10 5730.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metabolic engineering of cyanobacteria for the production of aromatic compounds
Furelos Brey, L. M., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Arabidopsis glucosinolate storage cells transform into phloem fibres at late stages of development
Hunziker, P., Halkier, Barbara Ann & Schulz, Alexander, Aug 2019, In: Journal of Experimental Botany. 70, 16, p. 4305–4317Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ultrastructural modeling of small angle scattering from photosynthetic membranes
Jakubauskas, D., Kowalewska, Ł., Sokolova, A. V., Garvey, C. J., Mortensen, Kell, Jensen, Poul Erik & Kirkensgaard, Jacob Judas Kain, 1 Dec 2019, In: Scientific Reports. 9, 13 p., 19405.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Engineering of plastids to optimize the production of high-value metabolites and proteins
Jensen, Poul Erik & Scharff, L. B., Oct 2019, In: Current Opinion in Biotechnology. 59, p. 8-15 8 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Coordination of Glucosinolate Biosynthesis and Turnover Under Different Nutrient Conditions
Jeschke, V., Weber, K., Moore, S. S. & Burow, Meike, 2019, In: Frontiers in Plant Science. 10, p. 1-17 1560.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Questionomics: Using Big Data to Ask and Answer Big Questions
Kliebenstein, D. J., 2019, In: Plant Cell. 31, 7, p. 1404-1405Research output: Contribution to journal › Editorial › Research
- Published
The Roles of Transcription Speed and Transcriptional Interference in Plant Gene Expression
Leng, Xueyuan, 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
The cytochrome P450 CYP72A552 is key to production of hederagenin‐based saponins that mediate plant defense against herbivores
Liu, Q., Khakimov, Bekzod, Cárdenas, Pablo D., Cozzi, F., Olsen, C. E., Jensen, Karen Rysbjerg, Hauser, T. P. & Bak, Søren, May 2019, In: New Phytologist (Online). 222, 3, p. 1599-1609Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Plant Networks as Traits and Hypotheses: Moving Beyond Description
Marshall-Colon, A. & Kliebenstein, D. J., 2019, In: Trends in Plant Science. 24, 9, p. 840-852Research output: Contribution to journal › Review › Research › peer-review
- Published
Characterization of Top Leader Elongation in Nordmann Fir (Abies nordmanniana)
Martens, Helle Jakobe, Sorensen, S., Burow, Meike & Veierskov, Bjarke, 2019, In: Journal of Plant Growth Regulation. 38, 4, p. 1354-1361Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Defining optimal electron transfer partners for light-driven cytochrome P450 reactions
Mellor, Silas Busck, Vinde, M. H., Nielsen, A. Z., Hanke, G. T., Abdiaziz, K., Roessler, M. M., Burow, Meike, Motawie, Mohammed Saddik, Møller, Birger Lindberg & Jensen, Poul Erik, 1 Sep 2019, In: Metabolic Engineering. 55, p. 33-43Research output: Contribution to journal › Journal article › Research › peer-review
- Published
R2R3 MYB Transcription Factors - Functions outside the DNA-Binding Domain
Millard, P. S., Kragelund, Birthe Brandt & Burow, Meike, 2019, In: Trends in Plant Science. 24, 10, p. 934-946Research output: Contribution to journal › Review › Research › peer-review
- Published
Specificity of MYB interactions relies on motifs in ordered and disordered contexts
Millard, P. S., Weber, K., Kragelund, Birthe Brandt & Burow, Meike, 2019, In: Nucleic Acids Research. 47, 18, p. 9592-9608 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transcription-driven chromatin repression of Intragenic transcription start sites
Nielsen, M., Ard, R., Leng, Xueyuan, Ivanov, M., Kindgren, P. R., Pelechano, V. & Marquardt, Sebastian, 1 Feb 2019, In: PLOS Genetics. 15, 2, p. 1-33 e1007969.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Changing substrate specificity and iteration of amino acid chain elongation in glucosinolate biosynthesis through targeted mutagenesis of Arabidopsis methylthioalkylmalate synthase1
Petersen, A., Gram Hansen, L., Mirza, N., Crocoll, C., Mirza, Osman Asghar & Halkier, Barbara Ann, Jul 2019, In: Bioscience Reports. 39, p. 1-15 BSR20190446.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
De novo production of benzyl glucosinolate in Escherichia coli
Petersen, A., Crocoll, C. & Halkier, Barbara Ann, 1 Jul 2019, In: Metabolic Engineering. 54, p. 24-34Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Glucosinolate Production in Heterologous Hosts: Choosing the right chassis
Petersen, A., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.Research output: Book/Report › Ph.D. thesis › Research
- Published
Metabolic changes and increased levels of bioactive compounds in white radish (Raphanus sativus L. Cv. 01) sprouts elicited by oligochitosan
Rakpenthai, A., Khaksar, G., Burow, Meike, Olsen, C. E. & Sirikantaramas, S., 19 Aug 2019, In: Agronomy. 9, 8, p. 1-14 467.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Secretion of Acetylxylan Esterase From Chlamydomonas reinhardtii Enables Utilization of Lignocellulosic Biomass as a Carbon Source
Ramos-Martinez, E. M., Fimognari, L., Rasmussen, M. K. & Sakuragi, Y., Feb 2019, In: Frontiers in Bioengineering and Biotechnology. 7, FEB, p. 1-9 35.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Expression and secretion of a lytic polysaccharide monooxygenase by a fast-growing cyanobacterium
Russo, D. A., Zedler, J. A. Z., Wittmann, D. N., Möllers, B., Singh, R. K., Batth, Tanveer Singh, van Oort, B., Olsen, Jesper Velgaard, Bjerrum, Morten Jannik & Jensen, Poul Erik, 2019, In: Biotechnology for Biofuels. 12, 1, 13 p., 74.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A force awakens: exploiting solar energy beyond photosynthesis
Russo, D. A., Zedler, J. A. Z. & Jensen, Poul Erik, 1 Mar 2019, In: Journal of Experimental Botany. 70, 6, p. 1703–1710Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metaproteomics of Freshwater Microbial Communities
Russo, D. A., Couto, N., Beckerman, A. P. & Pandhal, J., 2019, Mass Spectrometry of Proteins. Springer, Vol. 1977. p. 145-155 11 p. (Methods in molecular biology (Clifton, N.J.)).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
An Arabidopsis TIR-Lectin Two-Domain Protein Confers Defense Properties against Tetranychus urticae
Santamaría, M. E., Martínez, M., Arnaiz, A., Rioja, C., Burow, Meike, Grbic, V. & Díaza, I., 1 Apr 2019, In: Plant Physiology. 179, 4, p. 1298-1314Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Quantification and Localization of Formylated Phloroglucinol Compounds (FPCs) in Eucalyptus Species
Santos, B. M. D., Zibrandtsen, J. F. S., Gunbilig, D., Sørensen, Mette, Cozzi, F., Boughton, B. A., Heskes, A. M. & Neilson, Elizabeth Heather Jakobsen, 26 Feb 2019, In: Frontiers in Plant Science. 10, p. 1-14 186.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
THU-491-The role of alanine glyoxylate aminotransferase in hepatocellular carcinoma
Satriano, L., Lewinska, Monika, Rourke, C. O., Oliveira, D. V., Bhatt, D. K., Taranta, A., Herr, M., Straub, B., Conner, D. E. A., Budhu, D. A., Pomyen, Y., Ma, Tao, Gerhart-Hines, Zach, Stjernegaard, D. C. S., Matter, M., Crocoll, D. C., Wang, X. W., Marquardt, J. & Andersen, Jesper Bøje, 2019, p. e377.Research output: Contribution to conference › Poster › Research
- Published
Thermal unfolding and refolding of a lytic polysaccharide monooxygenase from Thermoascus aurantiacus
Singh, R. K., Blossom, B. M., Russo, D. A., van Oort, B., Croce, R., Jensen, P. E., Felby, C. & Bjerrum, Morten Jannik, 2019, In: R S C Advances. 9, 9 p., 29734.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interactions of Tomato and Botrytis cinerea Genetic Diversity: Parsing the Contributions of Host Differentiation, Domestication, and Pathogen Variation
Soltis, N. E., Atwell, S., Shi, G., Fordyce, R., Gwinner, R., Gao, D., Shafi, A. & Kliebenstein, D. J., 2019, In: Plant Cell. 31, 2, p. 502-519Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The P5A ATPase Spf1p is stimulated by phosphatidylinositol 4-phosphate and influences cellular sterol homeostasis
Sørensen, D. M., Holen, H. W., Pedersen, J. T., Martens, Helle Jakobe, Silvestro, D., Stanchev, L. D., Costa, S. R., Pomorski, Thomas Guenther, Lopez Marques, Rosa Laura & Palmgren, Michael, 15 Apr 2019, In: Molecular Biology of the Cell. 30, 9, p. 1069-1084Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Production of polyhydroxybutyrate in wood-ljungdahl microorganisms
Tappel, R., Behrendorff, J. B. Y. H., Koepke, M., Marcellin, E., Lemgruber, R. D. S. P., Valgepea, K. & Nielsen, L. K., 25 Apr 2019, IPC No. C12P7/625, Lanzatech, Inc., Patent No. US20190119706A1, Priority date 4 Oct 2017, Priority No. US201762568127PResearch output: Patent
- Published
Identification and characterisation of two high-affinity glucose transporters from the spoilage yeast Brettanomyces bruxellensis
Tiukova, I. A., Møller-Hansen, I., Belew, Zeinu Mussa, Darbani, B., Boles, E., Nour-Eldin, Hussam Hassan, Linder, T., Nielsen, J. & Borodina, I., 1 Sep 2019, In: FEMS Microbiology Letters. 366, 17, p. 1-9 fnz222.Research output: Contribution to journal › Letter › Research › peer-review
- Published
The Role of Phosphorylation Dynamics of CURVATURE THYLAKOID 1B in Plant Thylakoid Membranes
Trotta, A., Bajwa, A. A., Mancini, I., Paakkarinen, V., Pribil, Mathias & Aro, E. M., Dec 2019, In: Plant Physiology. 181, 4, p. 1615-1631Research output: Contribution to journal › Journal article › Research › peer-review
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Fusarium graminearum and its interactions with cereal heads: studies in the proteomics era
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The role of the cell wall in plant immunity
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Proteomic changes and endophytic micromycota during storage of organically and conventionally grown carrots
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Disentangling hydroxynitrile glucoside biosynthesis in a barley (Hordeum vulgare) metabolon provides access to elite malting barleys for ethyl carbamate-free whisky production
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Cryptococcus neoformans: plant–microbe interactions and ecology
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