Section for Molecular Plant Biology

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  1. Published

    Diverse Allyl Glucosinolate Catabolites Independently Influence Root Growth and Development

    Katz, E., Bagchi, R., Jeschke, V., Rasmussen, A. R. M., Hopper, A., Burow, Meike, Estelle, M. & Kliebenstein, D. J., 2020, In: Plant Physiology. 183, 3, p. 1376-1390 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Insights on the evolution of mycoparasitism from the genome of Clonostachys rosea

    Karlsson, M., Durling, M. B., Choi, J., Kosawang, C., Lackner, G., Tzelepis, G. D., Nygren, K., Dubey, M. K., Kamou, N., Levasseur, A., Zapparata, A., Wang, J., Amby, D. B., Jensen, B., Sarrocco, S., Panteris, E., Lagopodi, A. L., Pöggeler, S., Vannacci, G., Collinge, D. B. & 4 others, Hoffmeister, D., Henrissat, B., Lee, Y. & Jensen, Dan Funck, 2015, In: Genome Biology and Evolution. 7, 2, p. 465-480 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Artificial Fluorescent Glucosinolates (F-GSLs) Are Transported by the Glucosinolate Transporters GTR1/2/3

    Kanstrup, Christa, Jimidar, C. C., Tomas, J., Cutolo, G., Crocoll, C., Schuler, M., Klahn, P., Tatibouët, A. & Nour-Eldin, Hussam Hassan, 2023, In: International Journal of Molecular Sciences. 24, 2, 26 p., 920.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    The emerging role of the nitrate and peptide transporter family: NPF in plant specialized metabolism

    Kanstrup, Christa & Nour-Eldin, Hussam Hassan, 2022, In: Current Opinion in Plant Biology. 68, 10 p., 102243.

    Research output: Contribution to journal › Review › Research › peer-review

  5. Published

    Elucidation of the structure-function relationship in the Nitrate and Peptide Transporter Family

    Kanstrup, Christa, 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 189 p.

    Research output: Book/Report › Ph.D. thesis › Research

  6. Published

    A western blot protocol for detection of proteins heterologously expressed in Xenopus laevis oocytes

    Jørgensen, M. E., Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2016, Biotechnology of plant secondary metabolism: methods and protocols. Fett-Neto, A. G. (ed.). Springer, p. 99-107 9 p. (Methods in Molecular Biology, Vol. 1405).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  7. Published

    Transport of defense compounds from source to sink: lessons learned from glucosinolates

    Jørgensen, M. E., Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2015, In: Trends in Plant Science. 20, 8, p. 508-514 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Identification and Characterization of Glucosinolate Transporters

    Jørgensen, M. E., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  9. Published

    Phosphorylation at serine 52 and 635 does not alter the transport properties of glucosinolate transporter AtGTR1

    Jørgensen, M. E., Olsen, C. E., Halkier, Barbara Ann & Nour-Eldin, Hussam Hassan, 2016, In: Plant Signalling & Behavior. 11, 2, 6 p., e1071751.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    A functional EXXEK motif is essential for proton coupling and active glucosinolate transport by NPF2.11

    Jørgensen, M. E., Olsen, C. E., Geiger, D., Mirza, Osman Asghar, Halkier, Barbara Ann & Nour-Eldin, Hussam Hassan, 2015, In: Plant and Cell Physiology. 56, 12, p. 2340-2350 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Design and direct assembly of synthesized uracil-containing non-clonal DNA fragments into vectors by USERTM cloning

    Jørgensen, M. E., Wulff, N., Nafisi, M., Xu, Deyang, Wang, Cuiwei, Lambertz, S. K., Belew, Zeinu Mussa & Nour-Eldin, Hussam Hassan, 2017, In: Bio-protocol. 7, 22, 11 p., e2615.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Origin and evolution of transporter substrate specificity within the NPF family: [with Correction]

    Jørgensen, M. E., Xu, Deyang, Crocoll, C., Ernst, H. A., Ramírez, D., Motawie, Mohammed Saddik, Olsen, C. E., Mirza, Osman Asghar, Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2017, In: eLife. 6, 30 p., e19466.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. E-pub ahead of print

    Disentangling hydroxynitrile glucoside biosynthesis in a barley (Hordeum vulgare) metabolon provides access to elite malting barleys for ethyl carbamate-free whisky production

    Jørgensen, M. E., Houston, K., Jørgensen, Hans Jørgen Lyngs, Thomsen, H. C., Tekaat, L., Krogh, C. T., Mellor, Silas Busck, Braune, K. B., Damm, M. L., Pedas, P. R., Voss, C., Rasmussen, M. W., Nielsen, K., Skadhauge, B., Motawie, Mohammed Saddik, Møller, Birger Lindberg, Dockter, C. & Sørensen, Mette, 23 Apr 2024, (E-pub ahead of print) In: Plant Journal.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Uptake Assays in Xenopus laevis Oocytes Using Liquid Chromatography-mass Spectrometry to Detect Transport Activity

    Jørgensen, M., Crocoll, C., Halkier, Barbara Ann & Nour-Eldin, Hussam Hassan, 2017, In: Bio-protocol. 7, 20, 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Quantification of vitamin D3 and its hydroxylated metabolites in waxy leaf nightshade (Solanum glaucophyllum Desf.), tomato (Solanum lycopersicum L.) and bell pepper (Capsicum annuum L.)

    Jäpelt, R. B., Silvestro, D., Smedsgaard, J., Jensen, Poul Erik & Jakobsen, J., 2013, In: Food Chemistry. 138, 2-3, p. 1206-1211 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Cytoplasmic genetic variation and extensive cytonuclear interactions influence natural variation in the metabolome

    Joseph, B., Corwin, J. A., Li, B., Atwell, S. & Kliebenstein, D. J., 8 Oct 2013, In: eLife. 2

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Genetic variation in the nuclear and organellar genomes modulates stochastic variation in the metabolome, growth, and defense

    Joseph, B., Corwin, J. A. & Kliebenstein, D. J., 2015, In: P L o S Genetics. 11, 1, 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Quantitative variation in responses to root spatial constraint within Arabidopsis thaliana

    Joseph, B., Lau, L. & Kliebenstein, D. J., 2015, In: The Plant Cell. 27, 8, p. 2227-2243 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    cDNA, amino acid and carbohydrate sequence of barley seed-specific peroxidase BP 1

    Johansson, A., Rasmussen, S. K., Harthill, J. E. & Welinder, K. G., 1 Apr 1992, In: Plant Molecular Biology. 18, 6, p. 1151-1161 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Dual sgRNA-based Targeted Deletion of Large Genomic Regions and Isolation of Heritable Cas9-free Mutants in Arabidopsis

    Jin, Yu & Marquardt, Sebastian, 2020, In: Bio-protocol. 10, 20, 17 p., 3796.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    LncRNA FLAIL affects alternative splicing and represses flowering in Arabidopsis

    Jin, Yu, Ivanov, M., Dittrich, A. N., Nelson, A. D. L. & Marquardt, Sebastian, 2023, In: EMBO Journal. 42, 11, 21 p., e110921.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Winter fields antisense RNAs to kick off flowering

    Jin, Yu & Marquardt, Sebastian, 2021, In: Genes and Development. 38, 11-12, p. 785-786 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Coordination of Glucosinolate Biosynthesis and Turnover Under Different Nutrient Conditions

    Jeschke, V., Weber, K., Moore, S. S. & Burow, Meike, 2019, In: Frontiers in Plant Science. 10, p. 1-17 1560.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Glucosinolates

    Jeschke, V. & Burow, Meike, 17 May 2018, eLS. Wiley, p. 1-8 8 p. (eLS).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

  25. Published

    Stabilization of semi-solid-state starch by branching enzyme-assisted chain-transfer catalysis at extreme substrate concentration

    Jensen, S. L., Larsen, F. H., Bandsholm, O. & Blennow, Andreas, 2013, In: Biochemical Engineering Journal. 72, p. 1-10 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Levanase from Bacillus subtilis hydrolyses β-2,6 fructosyl bonds in bacterial levans and in grass fructans

    Jensen, S. L., Diemer, M. B., Lundmark, M. T., Larsen, F. H., Blennow, Andreas, Mogensen, Helle Kildal & Nielsen, T. H., 2016, In: International Journal of Biological Macromolecules. 85, p. 514-521 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Structural and physical properties of granule stabilized starch obtained by branching enzyme treatment

    Jensen, S. L., Zhu, F., Vamadevan, V., Bertoft, E., Seetharaman, K., Bandsholm, O. & Blennow, Andreas, 2013, In: Carbohydrate Polymers. 98, 2, p. 1490-1496 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Chloroplast evolution, structure and functions

    Jensen, Poul Erik & Leister, D. M., 2014, In: F1000 Prime. 6, 14 p., 40.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Engineering of plastids to optimize the production of high-value metabolites and proteins

    Jensen, Poul Erik & Scharff, L. B., Oct 2019, In: Current Opinion in Biotechnology. 59, p. 8-15 8 p.

    Research output: Contribution to journal › Review › Research › peer-review

  30. Published

    Coupling photosynthetic electron transport to metabolic engineering

    Jensen, Poul Erik, 2018, In: In Vitro Cellular & Developmental Biology - Plant. 54, Suppl. 1, p. S107 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research

  31. Published

    Cyanobacteria as an experimental platform for modifying bacterial and plant photosynthesis

    Jensen, Poul Erik & Leister, D. M., 2014, In: Frontiers in Bioengineering and Biotechnology. 2, 4 p., 7.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Investigation of the multifunctional gene AOP3 expands the regulatory network fine-tuning glucosinolate production in Arabidopsis

    Jensen, L. M., Kliebenstein, D. J. & Burow, Meike, 2015, In: Frontiers in Plant Science. 6, 15 p., 762.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    How to discover a metabolic pathway? An update on gene identification in aliphatic glucosinolate biosynthesis, regulation and transport

    Jensen, L. M., Halkier, Barbara Ann & Burow, Meike, 2014, In: Biological Chemistry. 395, 5, p. 529-543 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    A Regulatory RNA Inducing Transgenerationally Inherited Phenotypes: Studies on Natural Variation in Glucosinolate Profiles and Flowering Time

    Jensen, L. M., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 123 p.

    Research output: Book/Report › Ph.D. thesis › Research

  35. Published

    Natural variation in cross-talk between glucosinolates and onset of flowering in Arabidopsis

    Jensen, L. M., Jepsen, Henriette Kehlet Sciera, Halkier, Barbara Ann, Kliebenstein, D. J. & Burow, Meike, 2015, In: Frontiers in Plant Science. 6, 10 p., 697.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Characterization of microbial communities and fungal metabolites on field grown strawberries from organic and conventional production

    Jensen, Birgit, Knudsen, I. B., Andersen, B., Nielsen, K. F., Thrane, U., Jensen, Dan Funck & Larsen, J., 2013, In: International Journal of Food Microbiology. 160, 3, p. 313-322 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    AtRsgA from Arabidopsis thaliana is important for maturation of the small subunit of the chloroplast ribosome

    Janowski, M., Zoschke, R., Scharff, L., Martinez Jaime, S., Ferrari, C., Proost, S., Ng Wei Xiong, J., Omranian, N., Musialak-Lange, M., Nikoloski, Z., Graf, A., Schöttler, M. A., Sampathkumar, A., Vaid, N. & Mutwil, M., 2018, In: The Plant Journal. 96, 2, p. 404-420

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Ultrastructural modeling of small angle scattering from photosynthetic membranes

    Jakubauskas, D., Kowalewska, Ł., Sokolova, A. V., Garvey, C. J., Mortensen, Kell, Jensen, Poul Erik & Kirkensgaard, Jacob Judas Kain, 1 Dec 2019, In: Scientific Reports. 9, 13 p., 19405.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Structural Investigation of Photosynthetic Membrane Using Small-Angle Scattering

    Jakubauskas, D., 2018, The Niels Bohr Institute, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  40. Published

    TrancriptomeReconstructoR: data-driven annotation of complex transcriptomes

    Ivanov, M., Sandelin, Albin Gustav & Marquardt, Sebastian, 2021, In: BMC Bioinformatics. 22, 15 p., 290.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    On the Histidine Brace in Redox Enzymes and Chaperones

    Ipsen, J. Ø., 2021, Department of Geosciences and Natural Resource Management, Faculty of Science, University of Copenhagen. 209 p.

    Research output: Book/Report › Ph.D. thesis › Research

  42. Published

    ATP hydrolytic activity of purified Spf1p correlate with micellar lipid fluidity and is dependent on conserved residues in transmembrane helix M1

    Ipsen, J. Ø. & Sørensen, D. M., 2022, In: PLoS ONE. 17, 10, 18 p., e0274908.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Copper binding and reactivity at the histidine brace motif: insights from mutational analysis of the Pseudomonas fluorescens copper chaperone CopC

    Ipsen, J. Ø., Hernández‐Rollán, C., Muderspach, Sebastian Jannick, Brander, Søren, Bertelsen, A. B., Jensen, Poul Erik, Nørholm, M. H. H., Lo Leggio, Leila, Johansen, K. S. & Ferguson, S. (ed.), 2021, In: FEBS Letters. 595, 12, p. 1708-1720 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Lytic polysaccharide monooxygenases and other histidine-brace copper proteins: structure, oxygen activation and biotechnological applications

    Ipsen, J., Hallas-Møller, Magnus, Brander, Søren, Lo Leggio, Leila & Johansen, K. S., 2021, In: Biochemical Society Transactions. 49, 1, p. 531-540 10 p.

    Research output: Contribution to journal › Review › Research › peer-review

  45. Published

    Transcriptome and metabolite changes during hydrogen cyanamide-induced floral bud break in sweet cherry

    Ionescu, I. A., Lopez-Ortega, G., Burow, Meike, Bayo-Canha, A., Junge, A., Gericke, Oliver, Møller, Birger Lindberg & Sánchez Pérez, R., 2017, In: Frontiers in Plant Science. 8, 17 p., 1233.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Endophytic colonization of tomato plants by the biological control agent Clonostachys rosea

    Høyer, A. K., Jørgensen, Hans Jørgen Lyngs, Amby, Daniel Buchvaldt & Jensen, Birgit, 15 Jun 2014. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  47. Published

    Analysis of isolated PS I polypeptides for acid labile sulfide

    Høj, P. B., Halkier, Barbara Ann & Møller, Birger Lindberg, 1986, Progress in Photosynthesis Research. Biggins, J. (ed.). 1 ed. Dordrecht: Springer, Vol. II. p. 49-52 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  48. Published

    Plastocyanin is the long-range electron carrier between photosystem II and photosystem I in plants

    Höhner, R., Pribil, Mathias, Herbstová, M., Lopez, L. S., Kunz, H., Li, M., Wood, M., Svoboda, V., Puthiyaveetil, S., Leister, D. & Kirchhoff, H., 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 26, p. 15354-15362

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Effective strategies to diagnose and correct manganese deficiency in cereals

    Husted, Søren, Schmidt, Sidsel Birkelund, Pedas, P. R., Jensen, Poul Erik, Laursen, Kristian Holst & Schjoerring, Jan K., 2017, Proceedings Book: XVIII International Plant Nutrition Colloquium with Boron and Manganese Satellite Meetings. Carstensen, A., Laursen, K. H. & Schjoerring, J. K. (eds.). University of Copenhagen, p. 939-940 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  50. Published

    Arabidopsis glucosinolate storage cells transform into phloem fibres at late stages of development

    Hunziker, P., Halkier, Barbara Ann & Schulz, Alexander, Aug 2019, In: Journal of Experimental Botany. 70, 16, p. 4305–4317

    Research output: Contribution to journal › Journal article › Research › peer-review

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