- 2021
- Published
Curvature thylakoid 1 proteins modulate prolamellar body morphology and promote organized thylakoid biogenesis in Arabidopsis thaliana
Sandoval-Ibáñez, O., Sharma, A., Bykowski, M., Borràs-Gas, G., Behrendorff, J. B. Y. H., Mellor, Silas Busck, Qvortrup, Klaus, Verdonk, J. C., Bock, R., Kowalewska, Ł. & Pribil, Mathias, 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 42, 10 p., e2113934118.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Engineering and optimization of the 2-phenylethylglucosinolate production in Nicotiana benthamiana by combining biosynthetic genes from Barbarea vulgaris and Arabidopsis thaliana
Wang, Cuiwei, Crocoll, C., Agerbirk, Niels & Halkier, Barbara Ann, 2021, In: Plant Journal. 106, 4, p. 978-992Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Evolution of A bHLH Interaction Motif
Millard, P. S., Kragelund, Birthe Brandt & Burow, Meike, 2021, In: International Journal of Molecular Sciences. 22, 1, 18 p., 447.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fine mapping identifies NAD-ME1 as a candidate underlying a major locus controlling temporal variation in primary and specialized metabolism in Arabidopsis
Francisco, M., Kliebenstein, D. J., Rodríguez, V. M., Soengas, P., Abilleira, R. & Cartea, M. E., 2021, In: Plant Journal. 106, 2, p. 454-467Research output: Contribution to journal › Journal article › Research › peer-review
- Published
From Single Cells to Flowers – Biological Complexity Driving Plant Reproductive Development
Schwarz, Isabel Aimèe, Neumann, M., Vega, R., Xu, X., Cornaro, L., Colombo, L., Vernoux, T., Xu, J., Marquardt, Sebastian & Kaufmann, K., 2021, Preprints.org.Research output: Working paper › Preprint › Research
- Published
Functional Significance of Conserved Cysteines in the Extracellular Loops of the ATP Binding Cassette Transporter Pdr11p
Stanchev, L. D., Marek, M., Xian, F., Klöhn, M., Silvestro, D., Dittmar, G., Lopez Marques, Rosa Laura & Pomorski, Thomas Guenther, 2021, In: Journal of Fungi. 7, 1, 16 p., 2.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genetic variation, environment and demography intersect to shape Arabidopsis defense metabolite variation across Europe
Katz, E., Li, J. J., Jaegle, B., Ashkenazy, H., Abrahams, S. R., Bagaza, C., Holden, S., Pires, C. J., Angelovici, R. & Kliebenstein, D. J., 2021, In: eLife. 10, 25 p., e67784.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome size evolution is associated with climate seasonality and glucosinolates, but not life history, soil nutrients or range size, across a clade of mustards
Cacho, N. I., McIntyre, P. J., Kliebenstein, D. J. & Strauss, S. Y., 2021, In: Annals of Botany. 127, 7, p. 887-902 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Herbivore feeding preference corroborates optimal defense theory for specialized metabolites within plants
Hunziker, P., Lambertz, S. K., Weber, K., Crocoll, C., Halkier, Barbara Ann & Schulz, Alexander, 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 47, e2111977118.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Induction and Priming of Plant Defense by Root-Associated Insect-Pathogenic Fungi
Cachapa, J. C., Meyling, Nicolai Vitt, Burow, Meike & Hauser, T. P., 2021, In: Journal of Chemical Ecology. 47, p. 112-122 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Inhibition of Lytic Polysaccharide Monooxygenases by Plant Extracts
Tokin, Radina, 2021, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 156 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Inhibition of lpmos by fermented persimmon juice
Tokin, Radina, Ipsen, J. Ø., Poojary, Mahesha Manjunatha, Jensen, Poul Erik, Olsson, L. & Johansen, Katja Salomon, 2021, In: Biomolecules. 11, 12, 12 p., 1890.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Inhibition of lytic polysaccharide monooxygenase by natural plant extracts
Tokin, Radina, Frandsen, Kristian Erik Høpfner, Ipsen, J. Ø., Lo Leggio, Leila, Poojary, Mahesha Manjunatha, Berrin, J., Grisel, S., Brander, Søren, Jensen, Poul Erik & Johansen, Katja Salomon, 2021, In: New Phytologist. 232, 3, p. 1337–1349 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Light-Dependent Translation Change of Arabidopsis psbA Correlates with RNA Structure Alterations at the Translation Initiation Region
Gawroński, P., Enroth, Christel Hougård, Kindgren, P., Marquardt, Sebastian, Karpiński, S., Leister, D., Jensen, Poul Erik, Vinther, Jeppe & Scharff, L. B., 2021, In: Cells. 10, 2, 22 p., 322.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
LyGo: A Platform for Rapid Screening of Lytic Polysaccharide Monooxygenase Production
Hernández-rollán, C., Falkenberg, K. B., Rennig, M., Bertelsen, A. B., Ipsen, J. Ø., Brander, Søren, Daley, D. O., Johansen, Katja Salomon & Nørholm, M. H. H., 2021, In: A C S Synthetic Biology. 10, 4, p. 897-906 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Lytic polysaccharide monooxygenases and other histidine-brace copper proteins: structure, oxygen activation and biotechnological applications
Ipsen, J., Hallas-Møller, Magnus, Brander, Søren, Lo Leggio, Leila & Johansen, Katja Salomon, 2021, In: Biochemical Society Transactions. 49, 1, p. 531-540 10 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Modulating the activities of chloroplasts and mitochondria promotes ATP production and plant growth
Voon, C. P., Law, Y., Guan, X., Lim, S., Xu, Z., Chu, W., Zhang, R., Sun, F., Labs, M., Pribil, Mathias, Leister, D., Hronková, M., Kubásek, J., Cui, Y., Jiang, L., Tsuyama, M., Gardeström, P., Tikkanen, M. & Lim, B. L., 2021, 27 p. (bioRxiv).Research output: Working paper › Preprint › Research
- Published
Molecular rules and functional roles of noncoding transcription
Gowthaman, U., 2021, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 175 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
On the Histidine Brace in Redox Enzymes and Chaperones
Ipsen, J. Ø., 2021, Department of Geosciences and Natural Resource Management, Faculty of Science, University of Copenhagen. 209 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
PSC-db: A Structured and Searchable 3D-Database for Plant Secondary Compounds
Valdes-Jimenez, A., Pena-Varas, C., Borrego-Munoz, P., Arrue, L., Alegria-Arcos, M., Nour-Eldin, Hussam Hassan, Dreyer, I., Nunez-Vivanco, G. & Ramirez, D., 2021, In: Molecules. 26, 4, 10 p., 1124.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
PTR2/POT/NPF transporters: what makes them tick?
Prabhala, B. K., Rahman, M., Nour-Eldin, Hussam Hassan, Jørgensen, Flemming Steen & Mirza, Osman Asghar, 2021, In: Advances in Protein Chemistry and Structural Biology. 123, p. 219-240 22 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Quantitative interactions: The disease outcome of Botrytis cinerea across the plant kingdom
Caseys, C., Shi, G., Soltis, N., Gwinner, R., Corwin, J., Atwell, S. & Kliebenstein, D. J., 2021, In: G3: Genes, Genomes, Genetics. 11, 8, 15 p., jkab175.Research output: Contribution to journal › Review › Research › peer-review
- Published
Root-type ferredoxin-NADP+ oxidoreductase isoforms in Arabidopsis thaliana: Expression patterns, location and stress responses
Grabsztunowicz, M., Rantala, M., Ivanauskaite, A., Blomster, T., Koskela, M. M., Vuorinen, K., Tyystjarvi, E., Burow, Meike, Overmyer, K., Mahonen, A. P. & Mulo, P., 2021, In: Plant, Cell and Environment. 44, 2, p. 548-558 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Scission of Glucosidic Bonds by a Lentinus similis Lytic Polysaccharide Monooxygenases Is Strictly Dependent on H2O2while the Oxidation of Saccharide Products Depends on O2
Brander, Søren, Tokin, Radina, Ipsen, J., Jensen, Poul Erik, Hernández-Rollán, C., Nørholm, M. H. H., Lo Leggio, Leila, Dupree, P. & Johansen, Katja Salomon, 2021, In: ACS Catalysis. 11, 22, p. 13848-13859Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Specialized metabolites and valuable molecules in crop and medicinal plants: The evolution of their use and strategies for their production
D’Amelia, V., Docimo, T., Crocoll, C. & Rigano, M. M., 2021, In: Genes. 12, 6, 20 p., 936.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stationary sieve element proteins
Sanden, Niels Christian Holm & Schulz, Alexander, 2021, In: Journal of Plant Physiology. 266, 10 p., 153511.Research output: Contribution to journal › Review › Research › peer-review
- Published
Sugar transporters enable a leaf beetle to accumulate plant defense compounds
Yang, Z. L., Nour-Eldin, Hussam Hassan, Hänniger, S., Reichelt, M., Crocoll, C., Seitz, F., Vogel, H. & Beran, F., 2021, In: Nature Communications. 12, 1, 12 p., 2658.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The GORKY glycoalkaloid transporter is indispensable for preventing tomato bitterness
Kazachkova, Y., Zemach, I., Panda, S., Bocobza, S., Vainer, A., Rogachev, I., Dong, Y., Ben-Dor, S., Veres, D., Kanstrup, Christa, Lambertz, S. K., Crocoll, C., Hu, Y., Shani, E., Michaeli, S., Nour-Eldin, Hussam Hassan, Zamir, D. & Aharoni, A., 2021, In: Nature Plants. 7, p. 468-480Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Hda1 histone deacetylase limits divergent non-coding transcription and restricts transcription initiation frequency
Gowthaman, U., Ivanov, M., Schwarz, Isabel Aimèe, Patel, H. P., Müller, N. A., Garcia Pichardo, Desire, Lenstra, T. L. & Marquardt, Sebastian, 2021, In: EMBO Journal. 40, 23, 16 p., 108903.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The biosynthesis of thymol, carvacrol, and thymohydroquinone in Lamiaceae proceeds via cytochrome P450s and a short-chain dehydrogenase
Krause, S. T., Liao, P., Crocoll, C., Boachon, B., Foerster, C., Leidecker, F., Wiese, N., Zhao, D., Wood, J. C., Buell, C. R., Gershenzon, J., Dudareva, N. & Degenhardt, J., 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 52, 10 p., e2110092118.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
TrancriptomeReconstructoR: data-driven annotation of complex transcriptomes
Ivanov, M., Sandelin, Albin Gustav & Marquardt, Sebastian, 2021, In: BMC Bioinformatics. 22, 15 p., 290.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
VC1 catalyses a key step in the biosynthesis of vicine in faba bean
Björnsdotter, E., Nadzieja, M., Chang, W., Escobar-Herrera, L., Mancinotti, Davide, Angra, D., Xia, Xinxing, Tacke, R., Khazaei, H., Crocoll, C., Vandenberg, A., Link, W., Stoddard, F. L., O'Sullivan, D. M., Stougaard, J., Schulman, A. H., Andersen, S. U. & Geu-Flores, Fernando, 2021, In: Nature Plants. 7, p. 923–931Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Winter fields antisense RNAs to kick off flowering
Jin, Yu & Marquardt, Sebastian, 2021, In: Genes and Development. 38, 11-12, p. 785-786 2 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2022
- Published
A fungal lytic polysaccharide monooxygenase is required for cell wall integrity, thermotolerance, and virulence of the fungal human pathogen Cryptococcus neoformans
Probst, C., Hallas-Møller, Magnus, Ipsen, J. Ø., Brooks, J. T., Andersen, Karsten Wiberg, Haon, M., Berrin, J., Martens, Helle Jakobe, Nichols, C. B., Johansen, Katja Salomon & Alspaugh, J. A., 2022, bioRxiv, 70 p.Research output: Working paper › Preprint › Research
- Published
A plant balancing act: Meshing new and existing metabolic pathways towards an optimized system
Angelovici, R. & Kliebenstein, D., 2022, In: Current Opinion in Plant Biology. 66, 102173.Research output: Contribution to journal › Review › Research › peer-review
- Published
ATP hydrolytic activity of purified Spf1p correlate with micellar lipid fluidity and is dependent on conserved residues in transmembrane helix M1
Ipsen, J. Ø. & Sørensen, D. M., 2022, In: PLoS ONE. 17, 10, 18 p., e0274908.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Aphid Species and Feeding Location on Canola Influences the Impact of Glucosinolates on a Native Lady Beetle Predator
Cibils-Stewart, X., Kliebenstein, D. J., Li, B., Giles, K., McCornack, B. P. & Nechols, J., 2022, In: Environmental Entomology. 51, 1, p. 52-62 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Clopyralid applied to winter oilseed rape (Brassica napus L.) contaminates the food products nectar, honey and pollen
Hansted, L., Crocoll, C., Bitarafan, Z. & Andreasen, Christian, 2022, In: Food Control. 140, 7 p., 109124.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparison of Genome and Plasmid-Based Engineering of Multigene Benzylglucosinolate Pathway in Saccharomyces cerevisiae
Wang, Cuiwei, Poborsky, Michal, Crocoll, C., Nødvig, C. S., Mortensen, U. H. & Halkier, Barbara Ann, 2022, In: Applied and Environmental Microbiology. 88, 22, 15 p., e00978-22.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cyanogenesis in the Sorghum Genus: From Genotype to Phenotype
Cowan, M., Møller, Birger Lindberg, Norton, S., Knudsen, C., Crocoll, C., Furtado, A., Henry, R., Blomstedt, C. & Gleadow, R. M., 2022, In: Genes. 13, 17 p., 140.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cytosolic phosphofructokinases are important for sugar homeostasis in leaves of Arabidopsis thaliana
Perby, L. K., Richter, S., Weber, K., Hieber, A. J., Hess, N., Crocoll, C., Mogensen, Helle Kildal, Pribil, Mathias, Burow, Meike, Nielsen, T. H. & Mustroph, A., 2022, In: Annals of Botany. 129, 1, p. 37-52Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Elucidation of the structure-function relationship in the Nitrate and Peptide Transporter Family
Kanstrup, Christa, 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 189 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Engineering Escherichia coli towards production of plant specialized metabolites
Poborsky, Michal, 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 129 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Epigenetic Impact on Plant Plasticity
Aller, Emma Sofie Timm, 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 175 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Expanding the toolbox for Synthetic Biology by plant-derived modules: From protein expression regulation to protein scaffolding
Borràs I Gas, G., 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 131 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
FIONA1-mediated methylation of the 3'UTR of FLC affects FLC transcript levels and flowering in Arabidopsis
Sun, B., Bhati, K. K., Song, P., Edwards, Ashleigh Katrina, Petri, Louise, Kruusvee, Valdeko, Blaakmeer, A., Dolde, U., Rodrigues, V., Straub, D., Yang, J., Jia, G. & Wenkel, Stephan, 2022, In: PLOS Genetics. 18, 9, 22 p., e1010386.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genetic variation underlying differential ammonium and nitrate responses in Arabidopsis thaliana
Katz, E., Knapp, A., Lensink, M., Keller, C. K., Stefani, J., Li, J., Shane, E., Tuermer-Lee, K., Bloom, A. J. & Kliebenstein, D. J., 2022, In: The Plant Cell. 34, 12, p. 4696-4713Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Gibberellin and abscisic acid transporters facilitate endodermal suberin formation in Arabidopsis
Binenbaum, J., Wulff, N., Camut, L., Kiradjiev, K., Tal, I., Vasuki, H., Anfang, M., Zhang, Y., Sakvarelidze-Achard, L., Davière, J., Ripper, D., Bergua, E., Nour-Eldin, Hussam Hassan & Shani, E., 2022.Research output: Working paper › Preprint › Research
- Published
Heterologous expression of PtAAS1reveals the metabolic potential of the common plant metabolite phenylacetaldehyde for auxin synthesis in planta
Günther, Jan, Halitschke, R., Gershenzon, J. & Burow, Meike, 2022, bioRxiv.Research output: Working paper › Preprint › Research
- Published
Histone chaperone ASF1 mediates H3.3-H4 deposition in Arabidopsis
Zhong, Z., Wang, Y., Wang, M., Yang, F., Thomas, Quentin, Xue, Y., Zhang, Y., Liu, W., Jami-Alahmadi, Y., Xu, L., Feng, S., Marquardt, Sebastian, Wohlschlegel, J. A., Ausin, I. & Jacobsen, S. E., 2022, In: Nature Communications. 13, 15 p., 6970.Research output: Contribution to journal › Journal article › Research › peer-review
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Fusarium graminearum and its interactions with cereal heads: studies in the proteomics era
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The role of the cell wall in plant immunity
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Proteomic changes and endophytic micromycota during storage of organically and conventionally grown carrots
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Disentangling hydroxynitrile glucoside biosynthesis in a barley (Hordeum vulgare) metabolon provides access to elite malting barleys for ethyl carbamate-free whisky production
Research output: Contribution to journal › Journal article › Research › peer-review
Cryptococcus neoformans: plant–microbe interactions and ecology
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GET-Mediated Export of Defensive Glucosinolates is Key for Seed Accumulation
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