Section for Plant Glycobiology

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  1. 2015
  2. Published

    Beyond the Western front: targeted proteomics and organelle abundance profiling

    Parsons, H. T. & Heazlewood, J. L., 2015, In: Frontiers in Plant Science. 6, 5 p., 301.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Arabinogalactan biosynthesis: implication of atGALT29A enzyme activity regulated by phosphorylation and co-localized enzymes for nucleotide sugar metabolism in the compartments outside of the Golgi apparatus

    Poulsen, C. P., Dilokpimol, A. & Geshi, N., 2015, In: Plant Signalling & Behavior. 10, 2, 4 p., e984524.

    Research output: Contribution to journal › Letter › Research › peer-review

  4. Published

    Penium margaritaceum as a model organism for cell wall analysis of expanding plant cells

    Rydahl, M. G., Fangel, J. U., Mikkelsen, M. D., Johansen, I. E., Andreas, A., Harholt, J., Ulvskov, Peter, Jørgensen, Bodil, Domozych, D. S. & Willats, W. G. T., 2015, Plant cell expansion: methods and protocols. Estevez, J. M. (ed.). Springer, p. 1-21 21 p. (Methods in Molecular Biology, Vol. 1242).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  5. Published

    Influence of surface salinity gradient on dinoflagellate cyst community structure, abundance and morphology in the Baltic Sea, Kattegat and Skagerrak

    Sildever, S., Andersen, Thorbjørn Joest, Ribeiro, S. & Ellegaard, Marianne, 2015, In: Estuarine, Coastal and Shelf Science. 155, p. 1-7 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    The role of cysteine residues in redox regulation and protein stability of Arabidopsis thaliana starch synthase 1

    Skryhan, K., Cuesta-Seijo, J. A., Nielsen, M. M., Marri, L., Mellor, Silas Busck, Glaring, M. A., Jensen, Poul Erik, Palcic, M. M. & Blennow, Andreas, 2015, In: PLOS ONE. 10, 9, p. e0136997

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Structural characterization of a mixed-linkage glucan deficient mutant reveals alteration in cellulose microfibril orientation in rice coleoptile mesophyll cell walls

    Smith-Moritz, A. M., Hao, Z., Fernández-Niño, S. G., Fangel, J. U., Verhertbruggen, Y., Holman, H. N., Willats, W. G. T., Ronald, P. C., Scheller, H. V., Heazlewood, J. L. & Vega-Sánchez, M. E., 2015, In: Frontiers in Plant Science. 6, 13 p., 628.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Synergistic amylomaltase and branching enzyme catalysis to suppress cassava starch digestibility

    Sorndech, W., Meier, S., Jansson, A. M., Sagnelli, D., Hindsgaul, O., Tongta, S. & Blennow, Andreas, 2015, In: Carbohydrate Polymers. 132, p. 409-418 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    A multivariate approach for high throughput pectin profiling by combining glycan microarrays with monoclonal antibodies

    Sousa, A. G., Isager Ahl, Louise, Pedersen, H. L., Fangel, J. U., Sørensen, S. O. & Willats, W. G. T., 2015, In: Carbohydrate Research. 409, p. 41-47 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Implications for photonic applications of diatom growth and frustule nanostructure changes in response to different light wavelengths

    Su, Y., Lundholm, Nina, Friis, S. M. M. & Ellegaard, Marianne, 2015, In: Nano Research. 8, 7, p. 2363-2372 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Tuning of pectin methylesterification: pectin methylesterase inhibitor 7 modulates the processive activity of co-expressed pectin methylesterase 3 in a pH-dependent manner

    Sénéchal, F., L'Enfant, M., Domon, J., Rosiau, E., Crépeau, M., Surcouf, O., Esquivel-Rodriguez, J., Marcelo, P., Mareck, A., Guérineau, F., Kim, H., Mravec, Jozef, Bonnin, E., Jamet, E., Kihara, D., Lerouge, P., Ralet, M., Pelloux, J. & Rayon, C., 2015, In: The Journal of Biological Chemistry. 290, 38, p. 23320-23335 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Resistant starch diet induces change in the swine microbiome and a predominance of beneficial bacterial populations

    Umu, Ö. C. O., Frank, J. A., Fangel, J. U., Oostindjer, M., Da Silva, C. S., Bolhuis, E. J., Bosch, G., Willats, W. G. T., Pope, P. B. & Diep, D. B., 2015, In: Microbiome. 3, 1, p. 1-15 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Engineering temporal accumulation of a low recalcitrance polysaccharide leads to increased C6 sugar content in plant cell walls

    Vega-Sanchez, M. E., Loque, D., Lao, J., Catena, M., Verhertbruggen, Y., Herter, T., Yang, F., Harholt, J., Ebert, B., Baidoo, E. E. K., Keasling, J. D., Scheller, H. V., Heazlewood, J. L. & Ronald, P. C., 2015, In: Plant Biotechnology Journal. 13, 7, p. 903-914 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Complex Regulation of Prolyl-4-Hydroxylases Impacts Root Hair Expansion

    Velasquez, S. M., Ricardi, M. M., Poulsen, C. P., Oikawa, A., Dilokpimol, A., Halim, A., Mangano, S., Denita Juarez, S. P., Marzol, E., Salgado Salter, J. D., Dorosz, J. G., Borassi, C., Möller, S. R., Buono, R., Ohsawa, Y., Matsuoka, K., Otegui, M. S., Scheller, H. V., Geshi, N., Petersen, B. L. & 2 others, Iusem, N. D. & Estevez, J. M., 2015, In: Molecular Plant. 8, 5, p. 734-46 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    A new versatile microarray-based method for high-throughput screening of carbohydrate-active enzymes

    Vidal Melgosa, S., Pedersen, H. L., Schückel, J., Arnal, G., Dumon, C., Amby, Daniel Buchvaldt, Monrad, R. N., Westereng, B. & Willats, W. G. T., 2015, In: Journal of Biological Chemistry. 290, p. 9020-9036 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Development and Application of a New Microarray- Based Method for High-Throughput Screening of Carbohydrate Active Enzymes

    Vidal Melgosa, S., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 176 p.

    Research output: Book/Report › Ph.D. thesis › Research

  17. Published

    Multi-omics analysis identifies genes mediating the extension of cell walls in the Arabidopsis thaliana root elongation zone

    Wilson, M. H., Holman, T. J., Sørensen, I., Cancho-Sanchez, E., Wells, D. M., Swarup, R., Knox, J. P., Willats, W. G. T., Ubeda-Tomás, S., Holdsworth, M., Bennett, M. J., Vissenberg, K. & Hodgman, T. C., 2015, In: Frontiers in Cell and Developmental Biology. 3, 12 p., 10.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Profiling the hydrolysis of isolated grape berry skin cell walls by purified enzymes

    Zietsman, A. J. J., Moore, J. P., Fangel, J. U., Willats, W. G. T. & Vivier, M. A., 2015, In: Journal of Agricultural and Food Chemistry. 63, 37, p. 8267-8274 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Following the compositional changes of fresh grape skin cell walls during the fermentation process in the presence and absence of maceration enzymes

    Zietsman, A. J. J., Moore, J. P., Fangel, J. U., Willats, W. G. T., Trygg, J. & Vivier, M. A., 2015, In: Journal of Agricultural and Food Chemistry. 63, 10, p. 2798-2810 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. 2014
  21. Published

    Discovery of LPMO activity on hemicelluloses shows the importance of oxidative processes in plant cell wall degradation

    Agger, J. W., Isaksen, T., Várnai, A., Vidal Melgosa, S., Willats, W. G. T., Ludwig, R., Horn, S. J., Eijsink, V. G. H. & Westereng, B., 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 17, p. 6287-6292 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Pectic arabinan side chains are essential for pollen cell wall integrity during pollen development

    Cankar, K., Kortstee, A., Toonen, M. A. J., Wolters-Arts, M., Houbein, R., Mariani, C., Ulvskov, Peter, Jørgensen, Bodil, Schols, H. A., Visser, R. G. F. & Trindade, L. M., 2014, In: Plant Biotechnology Journal. 12, 4, p. 492-502 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Impact of starter cultures and fermentation techniques on the volatile aroma and sensory profile of chocolate

    Crafack, M., Keul, H., Eskildsen, C. E. A., Petersen, Mikael Agerlin, Saerens, S., Blennow, Andreas, Skovmand-Larsen, M., Swiegers, J. H., Petersen, G. B., Heimdal, H. & Nielsen, Dennis Sandris, 2014, In: Food Research International. 63, Part C, p. 306–316 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Arabidopsis thaliana glucuronosyltransferase in family GT14

    Dilokpimol, A. & Geshi, N., 2014, In: Plant Signalling & Behavior. 9, 3 p., e28891.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Galactosyltransferases from Arabidopsis thaliana in the biosynthesis of type II arabinogalactan: molecular interaction enhances enzyme activity

    Dilokpimol, A., Poulsen, C. P., Vereb, G., Kaneko, S., Schulz, Alexander & Geshi, N., 2014, In: B M C Plant Biology. 14, 14 p., 90.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Application of enzymes for efficient extraction, modification, and development of functional properties of lime pectin

    Dominiak, M. M., Søndergaard, K. M., Wichmann, J., Vidal Melgosa, S., Willats, W. G. T., Meyer, A. S. & Mikkelsen, J. D., 2014, In: Food Hydrocolloids. 40, p. 273-282 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Disruption of the microtubule network alters cellulose deposition and causes major changes in pectin distribution in the cell wall of the green alga, Penium margaritaceum

    Domozych, D. S., Sørensen, I., Sacks, C., Brechka, H., Andreas, A., Fangel, J. U., Rose, J. K. C., Willats, W. G. T. & Popper, Z. A., 2014, In: Journal of Experimental Botany. 65, 2, p. 465-479 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Pectin metabolism and assembly in the cell wall of the charophyte green alga Penium margaritaceum

    Domozych, D. S., Sørensen, I., Popper, Z. A., Ochs, J., Andreas, A., Fangel, J. U., Pielach, A., Sacks, C., Brechka, H., Ruisi-Besares, P., Willats, W. G. T. & Rose, J. K. C., 2014, In: Plant Physiology. 165, 1, p. 105-118 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Comparative glycan profiling of Ceratopteris richardii 'C-Fern' gametophytes and sporophytes links cell-wall composition to functional specialization

    Eeckhout, S., Leroux, O., Willats, W. G. T., Popper, Z. A. & Viane, R. L. L., 2014, In: Annals of Botany. 114, 6, p. 1295-1307 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Temporal changes in physical, chemical and biological sediment parameters in a tropical estuary after mangrove deforestation

    Ellegaard, Marianne, Nguyen, N. T. G., Andersen, Thorbjørn Joest, Michelsen, Anders, Lam Nguyen, N., Hai Doan, N., Kristensen, E., Weckström, K., Phuoc Hoang Son, T. & Lund-Hansen, L. C., 2014, In: Estuarine, Coastal and Shelf Science. 142, p. 32-40 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Narrow Bottlenecks Affect Pea Seedborne Mosaic Virus Populations during Vertical Seed Transmission but not during Leaf Colonization

    Fabre, F., Moury, B., Johansen, I. E., Simon, V., Jacquemond, M. & Senoussi, R., 2014, In: P L o S Pathogens. 10, 1

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Characterisation of a novel endo-xyloglucanase (XcXGHA) from Xanthomonas that accommodates a xylosyl-substituted glucose at subsite - 1

    Feng, T., Yan, K., Mikkelsen, M. D., Meyer, A. S., Schols, H. A., Westereng, B. & Mikkelsen, J. D., 2014, In: Applied Microbiology and Biotechnology. 98, 23, p. 9667-9679 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Characterization of an extensin-modifying metalloprotease: N-terminal processing and substrate cleavage pattern of Pectobacterium carotovorum Prt1

    Feng, T., Nyffenegger, C., Højrup, P., Vidal Melgosa, S., Yan, K., Fangel, J. U., Meyer, A. S., Kirpekar, F., Willats, W. G. T. & Mikkelsen, J. D., 2014, In: Applied Microbiology and Biotechnology. 98, 24, p. 10077-10089 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Arabinogalactan glycosyltransferases: enzyme assay, protein-protein interaction, subcellular localization, and perspectives for application

    Geshi, N., 2014, In: Advances in Botany. 2014, 7 p., 434979.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    A gene stacking approach leads to engineered plants with highly increased galactan levels in Arabidopsis

    Gondolf, V. M., Stoppel, R., Ebert, B., Rautengarten, C., Liwanag, A. J. M., Loque, D. & Scheller, H. V., 2014, In: B M C Plant Biology. 14, p. 1-11 11 p., 344.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Osteoblastic response to pectin nanocoating on titanium surfaces

    Gurzawska, K. A., Svava, R., Yihua, Y., Haugshøj, K. B., Dirscherl, K., Levery, S. B., Chrestensen, I. B., Damager, I., Weiss Nielsen, M., Jørgensen, Bodil, Jørgensen, Niklas Rye & Gotfredsen, Klaus, 2014, In: Materials Science and Engineering C: Materials for Biological Applications. 43, p. 117-125 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Extractability and digestibility of plant cell wall polysaccharides during hydrothermal and enzymatic degradation of wheat straw (Triticum aestivum L.)

    Hansen, M. A. T., Isager Ahl, Louise, Pedersen, H. L., Westereng, B., Willats, W. G. T., Jørgensen, H. & Felby, C., 2014, In: Industrial Crops and Products. 55, p. 63-69 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Second meal effect on appetite and fermentation of wholegrain rye foods

    Ibrügger, S., Vigsnæs, L. K., Blennow, Andreas, Skuflic, D., Raben, Anne, Lauritzen, Lotte & Kristensen, M. B., 2014, In: Appetite. 80, p. 248-256 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    The Arabidopsis cytosolic proteome: the metabolic heart of the cell

    Ito, J., Parsons, H. T. & Heazlewood, J. L., 2014, In: Frontiers in Plant Science. 5, 8 p., 21.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Arabinogalactan proteins: focus on carbohydrate active enzymes

    Knoch, E., Dilokpimol, A. & Geshi, N., 2014, In: Frontiers in Plant Science. 5, 9 p., 198.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Transcriptomic profiling to identify genes involved in Fusarium mycotoxin Deoxynivalenol and Zearalenone tolerance in the mycoparasitic fungus Clonostachys rosea

    Kosawang, Chatchai, Karlsson, M., Jensen, Dan Funck, Dilokpimol, A. & Collinge, David B., 2014, In: BMC Genomics. 15, 11 p., 55.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    The role of the cell wall in plant immunity

    Malinovsky, F. G., Fangel, J. U. & Willats, W. G. T., 2014, In: Frontiers in Plant Science. 5, 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Range of cell-wall alterations enhance saccharification in Brachypodium distachyon mutants

    Marriott, P. E., Sibout, R., Lapierre, C., Fangel, J. U., Willats, W. G. T., Hofte, H., Gómez, L. D. & McQueen-Mason, S. J., 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 40, p. 14601-14606 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    The ash dieback crisis: genetic variation in resistance can prove a long-term solution

    McKinney, L. V., Nielsen, Lene Rostgaard, Collinge, David B., Thomsen, Iben Margrete, Hansen, Jon Kehlet & Kjær, Erik Dahl, 2014, In: Plant Pathology. 63, 3, p. 485-499 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Evidence for land plant cell wall biosynthetic mechanisms in charophyte green algae

    Mikkelsen, M. D., Harholt, J., Ulvskov, Peter, Johansen, I. E., Fangel, J. U., Doblin, M. S., Bacic, A. & Willats, W. G. T., 2014, In: Annals of Botany. 114, 6, p. 1217-1236 20 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    On Levanderina fissa gen. & comb. nov. (Dinophyceae) (syn. Gymnodinium fissum, Gyrodinium instriatum, Gyr. uncatenum), a dinoflagellate with a very unusual sulcus

    Moestrup, Øjvind, Hakanen, P., Hansen, Gert, Daugbjerg, Niels & Ellegaard, Marianne, 2014, In: Phycologia. 53, 3, p. 265-292 28 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Pectic-β(1,4)-galactan, extensin and arabinogalactan-protein epitopes differentiate ripening stages in wine and table grape cell walls

    Moore, J. P., Fangel, J. U., Willats, W. G. T. & Vivier, M. A., 2014, In: Annals of Botany. 114, 6, p. 1279-1294 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Profiling the main cell wall polysaccharides of grapevine leaves using high-throughput and fractionation methods

    Moore, J. P., Nguema-Ona, E., Fangel, J. U., Willats, W. G. T., Hugo, A. & Vivier, M. A., 2014, In: Carbohydrate Polymers. 99, p. 190-198 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Tracking developmentally regulated post-synthetic processing of homogalacturonan and chitin using reciprocal oligosaccharide probes

    Mravec, Jozef, Kracun, S. K., Rydahl, M. G., Westereng, B., Miart, F., Clausen, M. H., Fangel, J. U., Daugaard, M., Van Cutsem, P., de Fine Licht, Henrik Hjarvard, Höfte, H., Malinovsky, F. G., Domozych, D. S. & Willats, W. G. T., 2014, In: Development. 141, p. 4841-4850 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Do rumen Bacteroidetes utilize an alternative mechanism for cellulose degradation?

    Naas, A. E., Mackenzie, A. K., Mravec, Jozef, Schückel, J., Willats, W. G. T., Eijsink, V. G. H. & Pope, P. B., 2014, In: mBio (Print). 5, 4, 6 p., e01401-14.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Arabinogalactan glycosyltransferases target to a unique subcellular compartment that may function in unconventional secretion in plants

    Poulsen, C. P., Dilokpimol, A., Mouille, G., Burow, Meike & Geshi, N., 2014, In: Traffic. 15, 11, p. 1219-1234 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Understanding the relationship between cotton fiber properties and non-cellulosic cell wall polysaccharides

    Rajasundaram, D., Runavot, J., Guo, X., Willats, W. G. T., Meulewaeter, F. & Selbig, J., 2014, In: P L o S One. 9, 11, 11 p., e112168.

    Research output: Contribution to journal › Journal article › Research › peer-review

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