Precise, autocatalytic chemistry on proteins and peptides
In this project chemical and molecular biology skills are jointed to develop a system for testing if acylation can be performed at specific sites and if introduced modifications can improve stability. Thus, providing proteins and peptides with enhanced pharmaceutical properties.
This project will investigate site-specific acylation of proteins and peptides, with a focus on developing improved therapeutics. Different functional moieties will be attached to proteins or peptides via optimized amino acid sequences (Lys-His tag) placed in flexible terminals or internal loop regions to achieve or enhance serum-stability and/or cell-toxicity. The central focus will be on the protein alpha-1 antitrypsin (A1AT), belonging to the serpin superfamily and the antibody Rituximab. Proteins comprising human-like glycosylation patterns will be achieved by production in glyco-engineered Saccharomyces cerevisiae and Chinese Hamster Ovary cells. Furthermore, peptide inhibitors of the essential fungal protein Pma1 will be modified to enhance serum-stability and cell-permeability. Lys-His tags will be optimized to achieve optimal acylation efficiency, and the activity and stability of acylated protein/peptide conjugates will be assessed through binding studies, enzyme assays, and cell-toxicity assays.
Funded by: Independent Research Fund Denmark, fields of ‘Technology and Production Sciences (FTP)’
Period: 2022-2026
Gustav Søndergaard Nymand
PhD Fellow