Department of Plant and Environmental Sciences

Section for Plant and Soil Sciences

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2024
Published
Soil organic carbon input and stabilization from cover crops
Engedal, Tine, 2024, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 143 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
The role of waste biorefineries towards climate neutrality: Insights from a life cycle perspective
Ravi, Rahul, 2024, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 146 p.
Research output: Book/Report › Ph.D. thesis › Research
2023
Published
Dissecting the F-bZIP Regulated Zinc Deficiency Response in Legumes and Zinc Hyperaccumulators
Liao, Feixue, 2023, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Life Cycle Assessment as a tool to design future agricultural Systems: Evaluation of technologies aimed at closing nutrient loops & decreasing farm-related environmental impacts
Beyers, Miriam, 2023, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 221 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Plant membrane processes in plant-powdery mildew fungus interactions: new insights into regulatory mechanisms on specialized recycling of PEN1
Liu, Mengqi, 2023, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 128 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Unconventional extracellular vesicle secretion in plant immunity against filamentous pathogens
Doukoudaki, Paraskevi, 2023, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 129 p.
Research output: Book/Report › Ph.D. thesis › Research
2022
Published
Biochar Mediators for Debromination of Brominated C₂ Pollutants: Biochar substrates, characteristics, and activation
Lindhardt, Jonathan Hessner, 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 195 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Identification and functional verification of MON1, a target of the barley powdery mildew fungal effector CSEP0162
Liao, W., 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 96 p.
Research output: Book/Report › Ph.D. thesis › Research
2021
Published
Characterisation of soil and organic wastes using Fourier transform infrared photoacoustic spectroscopy (FTIR-PAS) and multivariate analysis
Huang, J., 2021, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 123 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Investigating foliar-applied phosphorus absorption and translocation in barley using bioimaging techniques
Arsic, M., 2021, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 143 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Reducing greenhouse gas emissions from rice production systems - towards adaptation of more water-efficient and Climate Smart Agricultural practices
Islam, S. F., 2021, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 206 p.
Research output: Book/Report › Ph.D. thesis › Research
2020
Published
Evaluation of sorghum genotypes for agronomic traits, nutritional and bioenergy parameters in contrastinge environments and reaction to Striga hermonthica
Udoh, D. A., 2020, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 136 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Plant nutritional value of Greenlandic glacial rock flour _ an amendment to improve weathered and nutrient poor soils
Gunnarsen, Klara Cecilia, 2020, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 158 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
The extrahaustorial membrane of barley powdery mildew – new insights into transport mechanisms and membrane characteristics
Smigielski, L., 2020, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
2019
Published
Assessment of risks related to agricultural use of sewage sludge, pig and cattle slurry
Pedersen, K. E., Brandt, Kristian Koefoed, Hansen, M., Cedergreen, Nina & Magid, Jakob, 2019, Department of Plant and Environmental Sciences, University of Copenhagen. 143 p.
Research output: Book/Report › Report › Research
Published
Association mapping of biorefinery traits relevant for development of dual-purpose varieties of winter wheat
Malik, P. L., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 175 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Compound-specific Isotope Ratio Analysis for Authentication of High-value Plant Products
Novák, V., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Genomic Selection and Genome-Wide Association Studies for Seed Quality Traits in Winter Barley
Ankamah-Yeboah, T., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Identification of candidate genes involved in anthocyanin biosynthesis to improve the pigment content in carrot taproots
Meng, G., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Improving the nitrogen retention and fertilizer value of thermally dried digestate solids by addition of strong acid, alum or zeolite
Liu, J., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Molecular Mechanisms of Zinc Deficiency Sensing and Regulation in Arabidopsis thaliana
Lilay, Grmay Hailu, 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Plasticity of endodermal suberization in barley (Hordeum vulgare L.) roots in response to manganese deficiency and the accompanying consequences for ion homeostasis
Chen, A., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Straw yield and quality parameters of wheat for bio-refineries as affected by nitrogen application
van Hecke, J. J. J., 2019, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Summary report on mechanisms underpinning beneficial plant associations based on APSIM and DAISY
Weih, M., Berghuijs, H. N. C., Ghaley, Bhim Bahadur, Hansen, Line Vinther, Vico, G. & Karley, A. J. (ed.), 2019, 44 p.
Research output: Book/Report › Report › Research
2018
Published
Climate-smartness of smallholder crop-livestock systems: Insights from Central Kenya
Ortiz-Gonzalo, Daniel, 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Combined application of biochar and phosphate-solubilizing Penicillium spp. in wheat: effects on plant and soil microorganisms
Efthymiou, K., 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Improving Nitrogen Use Efficiency and Grain Quality of Barely under Elevated Atmospheric CO2
Gao, Y., 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Plant cell walls: interactions with nitrogen supply and silicon deposition in Brachypodium distachyon and wheat
Glazowska, S. E., 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Potential for increasing phosphorus bioavailability of thermally treated sewage sludge using phosphate solubilising fungi
Raymond, Nelly Sophie, 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Unravelling the impacts of phosphorus deficiency on the photosynthetic machinery to determine the phosphorus status of plants
Carstensen, A., 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Økonomiske vurderinger i forhold til værdikæden for Gul Bioraffinering
Jensen, Jørgen Dejgård, Gylling, M. & Jørgensen, H., 2018, Institut for Fødevare- og Ressourceøkonomi, Københavns Universitet. 11 p. (IFRO Dokumentation; No. 2018/6).
Research output: Book/Report › Report › Research
2017
Published
Closing the nutrient loops in (peri) urban farming systems through composting
Nigatu, A. N., 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Development and Adaptation of Water Management Systems to Mitigate Greenhouse Gas Emissions from Intensive Rice Production
Tariq, Azeem, 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Developments in the use of chlorophyll α fluorescence to diagnose phosphorus deficiency in plants
Carstensen, A. & Husted, Søren, 2017, International Fertiliser Society (ifs). 24 p. (International Fertiliser Society. Proceedings, Vol. 811).
Research output: Book/Report › Book › Research › peer-review
Published
Effects of Manure and Biogas Residues Application on N₂0 Emissions and Soil C Sequestration
Nguyen, Q. V., 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
FROM LAND TO RICHES: THE SHIFTING ROLE OF LAND AS UPLAND LIVELIHOODS COMMERCIALIZE IN LAO P.D.R.
Hepp, C. M., 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Legume integration as an agroecological intensification option for smallholders in uplands of Southeast Asia
Yap, V. Y., 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Long-Term Fertilization Impacts on Soil Fertility and Resources Use: Effects on Soil P Cycling, Microbial Functioning, Crop Productivity and Nutrient Use Efficiency
van der Bom, Frederik, 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Proceedings Book XVIII International Plant Nutrition Colloquium: with Boron and Manganese Satellite Meeting
Carstensen, A. (ed.), Laursen, Kristian Holst (ed.) & Schjoerring, Jan K. (ed.), 2017, Department of Plant and Environmental Sciences, University of Copenhagen. 948 p.
Research output: Book/Report › Book › Research
Published
Recycling phosphorus from wastewater: Plant availability of phosphorus from sewage sludge and related products
Lemming, C. K., 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
2016
Published
Application of Fourier transform infrared-photoacoustic spectroscopy for the characterisation of organic wastes and determination of their usefulness for bioenergy and as soil amendments
Bekiaris, G., 2016, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 111 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Characterization of Phosphate Transporters BdPT4 and BdPT8 in Mycorrhizal and Non-Mychorrhizal Brachypodium distachyon
Clausen, S. S., 2016, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 135 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Characterization of the Wheat Stripe Rust (Puccinia striiformis f. sp. tritici) Fungal Effector Candidate PEC6 and Its Corresponding Host Targets
Liu, C., 2016, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 109 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Det første år på Naturressourcer: En undersøgelse af studerendes oplevelser på det første år af bacheloruddannelsen i Naturressourcer på Københavns Universitet
Malm, Rie Hjørnegaard, Madsen, Lene Møller, Ulriksen, Lars & de Neergaard, Andreas, 2016, Institut for Naturfagenes Didaktik, Københavns Universitet. 78 p. (IND's Skriftserie; No. 47).
Research output: Book/Report › Report › Research
Published
Identification and characterization of novel defence and PCD signalling components in Arabidopsis: by using syp121 syp122 as a tool
Xie, Wenjun, 2016, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Recovery of Nutrients from Biogas Digestate with Biochar and Clinoptilolite
Kocatürk, N. P., 2016, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
2015
Published
Environmental Consequences of Pig Slurry Treatment Technologies: A Life Cycle Perspective
ten Hoeve, Marieke, 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Genetic Dissection of Bioenergy-Related Traits in Sweet Sorghum (Sorghum bicolor) under Danish Agro-Climatic Conditions
Mocoeur, A. R. J., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Genetic Study of the Manganese Use Efficiency Trait in Winter Barley (Hordeum vulgare L.) by Genome- Wide Association and Genomic Selection
Leplat, F. J. V., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 152 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Genome-Wide Association Mapping for Cell Wall Composition and Properties in Temperate Grasses
Bellucci, A., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 141 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Glutamine Synthetases GLN1;2 and GLN2 in Relation to Arabidopsis Growth Response to Elevated Atmospheric Carbon Dioxide and Varying Nitrogen Forms
Vurrakula, S., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 165 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Manganese Loading and Photosystem II Stability are Key Components of Manganese Efficiency in Plants
Schmidt, Sidsel Birkelund, 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 126 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Physiological, Biochemical and Molecular Characterization of Barley (Hordeum vulgare L.) and Maize (Zea mays L.) for Improving Manganese Efficiency
Long, L., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Resistance to Powdery Mildews: Peptide Aptamers as Resistance Strategy in Barley
Siwoszek, A. I., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
The Effect of Gasification Biochar on Soil Carbon Sequestration, Soil Quality and Crop Growth
Hansen, Veronika, 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Thermochemical treatment of biogas digestate solids to produce organic fertilisers: The effect of acidification and drying on N losses, soil N turnover and plant fertilizer value
Pantelopoulos, A., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 118 p.
Research output: Book/Report › Ph.D. thesis › Research
2014
Published
Biotechnology Assisted Wheat Breeding for Organic Agriculture
Steffan, P. M., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Biotransformation of Organic Waste into High Quality Fertilizer: Potentials and Limitations for Compost Process Optimization and Nutrient Recycling
Bryndum, S., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Cytosolic glutamine synthetase in barley: a target for improving nitrogen use efficiency?
Thomsen, H. C., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Functional Analysis of Barley Powdery Mildew Effector Candidates and Identification of their Barley Targets
Ahmed, A. A., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Functions of Glutamine Synthetase Isoforms in the Nitrogen Metabolism of Plants
Guan, M., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 118 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Greenhouse Gas Emissions from Manure Management Chains on Smallholder Livestock Farms with and without Biogas
Duong, Q. V., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 213 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Lanthanide Elements as Labels in Multiplexed Analysis of Proteins and MicroRNAs by Laser Ablation Inductively Coupled Plasma Mass Spectrometry
de Bang, T. C., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 144 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Laser-Induced Breakdown Spectroscopy and Chlorophyll a Flourescence Transients: In-situ Analytical Methods of the Future
Frydenvang, Jens, 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
New Ways to Determine Plant Nutrient Deficiences Using Fast Spectroscopy
van Maarschalkerweerd, M., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.
Research output: Book/Report › Ph.D. thesis › Research
Published
Nitrous Oxide Emissions after Application of Manure-Derived Fertilisers
Zhu, K., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 133 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Upgrading of the Solid Fraction of Pig Slurry as Phosphorus Fertilizer: The Impact of Biological and Thermal Processing on P Availability
Christel, W., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 185 p.
Research output: Book/Report › Ph.D. thesis › Research
2013
Published
Animal manure recycling: treatment and management
Sommer, S. G. (ed.), Christensen, M. L. (ed.), Schmidt, T. (ed.) & Jensen, Lars Stoumann (ed.), 2013, Wiley. 382 p.
Research output: Book/Report › Book › Research › peer-review
Published
Botanicals, endophytes and plant growth-promoting rhizobacteria (PGPR) to control Black Sigatoka disease of banana in Uganda
Mortensen, C. N., Collinge, David B., Jørgensen, Hans Jørgen Lyngs, Gumisiriya, C., Kumakech, A., Kateete, S. N. & Okori, P., 2013, Makerere University.
Research output: Book/Report › Report › Research
Published
Function and regulation of plant major intrinsic proteins: the role in arsenic accumulation
Popovic, M., 2013, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 108 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Greenhouse gas and ammonia emissions from composting of animal manure and other organic waste products
Chowdhury, M. A., 2013, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 230 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Heat tolerance in wheat: linking physiological phenotyping to quantitative genetics
Sharma, D. K., 2013, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 182 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Peering into the black box: in search of biologically meaningsful measurements of C, N and P turnover in soil
Magid, Jakob, 2013, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 415 p.
Research output: Book/Report › Doctoral thesis › Research
Published
Plant breeding from laboratories to fields
Andersen, S. B. (ed.), 2013, InTech. 288 p.
Research output: Book/Report › Book › Research › peer-review
Published
Silicon in cereal straw: role of transport proteins, interactions with nitrogen supply and implications for bioenergy potential
Murozuka, E., 2013, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 185 p.
Research output: Book/Report › Ph.D. thesis › Research
2012
Published
Low external input tropical agriculture: livelihoods, greenhouse gasses and sustainability: a study on the role of the system of rice intensification (SRI) in rain-fed lowland rice ecosystem in Cambodia
Ly, P., 2012, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 143 p.
Research output: Book/Report › Ph.D. thesis › Research
Published
Methods for analysis of the distribution and speciation of iron and zinc in the cereal grain
Hansen, Thomas Hesselhøj, 2012, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 183 p.
Research output: Book/Report › Ph.D. thesis › Research

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Plant breeding from laboratories to fields
Research output: Book/Report › Book › Research › peer-review
Published
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Quantification of amylose, amylopectin and β-glucan in the search for genes controlling the three major quality traits in barley using genome-wide association studies
Research output: Contribution to journal › Journal article › Research › peer-review
Published
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Fusarium graminearum and its interactions with cereal heads: studies in the proteomics era
Research output: Contribution to journal › Journal article › Research › peer-review
Published

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