Section for Plant Biochemistry

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  1. Published

    Characterization of six putative photosystem I mutants in barley

    Hiller, R. G., Møller, Birger Lindberg & Høyer-Hansen, G., 1980, In: Carlsberg Research Communications. 45, p. 315-328 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    A Quick HYL1-Dependent Reactivation of MicroRNA Production Is Required for a Proper Developmental Response after Extended Periods of Light Deprivation

    Achkar, N. P., Cho, S. K., Poulsen, C., Arce, A. L., Re, D. A., Giudicatti, A. J., Karayekov, E., Ryu, M. Y., Choi, S. W., Harholt, J., Casal, J. J., Yang, S. W. & Manavella, P. A., 2018, In: Developmental Cell. 46, 2, p. 236-247, e1-e6 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Whole genome analysis of a schistosomiasis-transmitting freshwater snail

    Adema, C. M., Hillier, L. W., Jones, C. S., Loker, E. S., Knight, M., Minx, P., Oliveira, G. D., Raghavan, N., Shedlock, A., do Amaral, L. R., Arican-Goktas, H. D., Assis, J. G., Baba, E. H., Baron, O. L., Bayne, C. J., Bickham-Wright, U., Biggar, K. K., Blouin, M., Bonning, B. C., Botka, C. & 97 others, Bridger, J. M., Buckley, K. M., Buddenborg, S. K., Lima Caldeira, R., Carleton, J., Carvalho, O. S., Castillo, M. G., Chalmers, I. W., Christensens, M., Clifton, S. W., Cosseau, C., Coustau, C., Cripps, R. M., Cuesta-Astroz, Y., Cummins, S. F., di Stephano, L., Dinguirard, N., Duval, D., Emrich, S., Feschotte, C., Feyereisen, R., FitzGerald, P., Fronick, C., Fulton, L., Galinier, R., Gava, S. G., Geusz, M., Geyer, K. K., Giraldo-Calderón, G. I., de Souza Gomes, M., Gordy, M. A., Gourbal, B., Grunau, C., Hanington, P. C., Hoffmann, K. F., Hughes, D. S. T., Humphries, J., Jackson, D. J., Jannotti-Passos, L. K., de Jesus Jeremias, W., Jobling, S., Kamel, B., Kapusta, A., Kaur, S., Koene, J. M., Kohn, A. B., Lawson, D., Lawton, S. P., Liang, D., Limpanont, Y., Liu, S., Lockyer, A. E., Lovato, T. L., Ludolf, F., Magrini, V., McManus, D. P., Medina, M., Misra, M., Mitta, G., Mkoji, G. M., Montague, M. J., Montelongo, C., Moroz, L. L., Munoz-Torres, M. C., Niazi, U., Noble, L. R., Oliveira, F. S., Pais, F. S., Papenfuss, A. T., Peace, R., Pena, J. J., Pila, E. A., Quelais, T., Raney, B. J., Rast, J. P., Rollinson, D., Rosse, I. C., Rotgans, B., Routledge, E. J., Ryan, K. M., Scholte, L. L. S., Storey, K. B., Swain, M., Tennessen, J. A., Tomlinson, C., Trujillo, D. L., Volpi, E. V., Walker, A. J., Wang, T., Wannaporn, I., Warren, W. C., Wu, X., Yoshino, T. P., Junaid Yusuf, M., Zhang, S., Zhao, M. & Wilson, R. K., 2017, In: Nature Communications. 8, 11 p., 15451.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Tea toxicity and cholinesterase inhibition of Huilliche herbal medicine

    Adsersen, A., Guzman, A., Mølgaard, Per & Simonsen, H. T., 2013, In: Journal of Complementary and Integrative Medicine. 10, 1, p. 1-5 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Glucosinolate turnover in Brassicales species to an oxazolidin-2-one, formed via the 2-thione and without formation of thioamide

    Agerbirk, Niels, Matthes, A., Erthmann, P. Ø., Ugolini, L., Cinti, S., Lazaridi, E., Nuzillard, J., Mueller, C., Bak, Søren, Rollin, P. & Lazzeri, L., 2018, In: Phytochemistry. 153, p. 79-93

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Making use of surplus sugar

    Agerbirk, Niels, 2020, In: Nature Chemical Biology. 16, 12, p. 1283-1284 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Multiple hydroxyphenethyl glucosinolate isomers and their tandem mass spectrometric destinction in a geographically structured polymorphism in the crucifer Barbarea vulgaris

    Agerbirk, Niels, Olsen, C. E., Heimes, C., Christensen, S., Bak, Søren & Hauser, T. P., 2015, In: Phytochemistry. 115, p. 130-142 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Ancient biosynthesis in an oil crop: Glucosinulate profiles in Limnanthes alba and its relatives (Limnanthaceae, Brassicales)

    Agerbirk, Niels, Pattison, David, Mandáková, T., Lysak, M. A., Montaut, S. & Stærk, Dan, 2022, In: Journal of Agricultural and Food Chemistry. 70, p. 1134-1147

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Specific glucosinolate analysis reveals variable levels of epimeric glucobarbarins, dietary precursors of 5-phenyloxazolidine-2-thiones, in watercress types with contrasting chromosime numbers

    Agerbirk, Niels, Olsen, C. E., Cipollini, D., Ørgaard, Marian, Linde-Laursen, I. & Chew, F. S., 2014, In: Journal of Agricultural and Food Chemistry. 62, 39, p. 9586-9596 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Derivatization of isothiocyanates and their reactive adducts for chromatographic analysis

    Agerbirk, Niels, De Nicola, G. R., Olsen, C. E., Mueller, C. & Iori, R., 2015, In: Phytochemistry. 118, p. 109-115 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Glucosinolate profiles and phylogeny in Barbarea compared to other tribe Cardamineae (Brassicaceae) and Reseda (Resedaceae), based on a library of ion trap HPLC-MS/MS data of reference desulfoglucosinolates

    Agerbirk, Niels, Hansen, Cecilie Ida Cetti, Olsen, C. E., Kiefer, C., Hauser, T. P., Christensen, S., Jensen, Karen Rysbjerg, Ørgaard, Marian, Pattison, David, Lange, Conny Bruun Asmussen, Cipollini, D. & Koch, M. A., 2021, In: Phytochemistry. 185, 112658.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Øvelsesvejledning Biokemi 1

    Agerbirk, Niels & Bjergegaard, C., 2014, 10 ed. Institut for Fødevarevidenskab, Det Natur- og Biovidenskabelige Fakultet, Københavns Universitet.

    Research output: Book/Report › Compendium/lecture notes › Education

  13. Published

    Glucosinolate hydrolysis products in the crucifer Barbarea vulgaris include a thiazolidine-2-one from a specific phenolic isomer as well as oxazolidine-2-thiones

    Agerbirk, Niels & Olsen, C. E., 2015, In: Phytochemistry. 115, p. 143-151 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Erratum: Glucosinolates, flea beetle resistance, and leaf pubescence as taxonomic characters in the genus Barbarea (Brassicaceae) (Phytochemistry (2003) 63 (69-80))

    Agerbirk, Niels, Ørgaard, Marian & Nielsen, J. K., Nov 2003, In: Phytochemistry. 64, 6, p. 1177 1 p.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  15. Published

    Comparison of glucosinolate diversity in the crucifer tribe Cardamineae and the remaining order Brassicales highlights repetitive evolutionary loss and gain of biosynthetic steps

    Agerbirk, Niels, Hansen, Cecilie Ida Cetti, Kiefer, C., Hauser, T. P., Ørgaard, Marian, Lange, Conny Bruun Asmussen, Cipollini, D. & Koch, M. A., 2021, In: Phytochemistry. 185, 112668.

    Research output: Contribution to journal › Review › Research › peer-review

  16. Published

    "Seeing" the electromagnetic spectrum: spotlight on the cryptochrome photocycle

    Aguida, B., Babo, J., Baouz, S., Jourdan, N., Procopio, M., El-Esawi, M. A., Engle, D., Mills, S., Wenkel, Stephan, Huck, A., Berg-Sørensen, K., Kampranis, Sotirios, Link, J. & Ahmad, M., 2024, In: Frontiers in Plant Science. 15, 20 p., 1340304.

    Research output: Contribution to journal › Review › Research › peer-review

  17. Published

    Identification and characterization of the iridoid synthase involved in oleuropein biosynthesis in olive (Olea europaea) fruits

    Alagna, F., Geu-Flores, Fernando, Kries, H., Panara, F., Baldoni, L., O'Connor, S. E. & Osbourn, A., 2016, In: Journal of Biological Chemistry. 291, 11, p. 5542-5554 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Metabolic engineering of cucurbitacins in Cucurbita pepo hairy roots

    Almeida, A., Dong, L., Thorsen, T. H., Raadam, Morten Hessellund, Khakimov, Bekzod, Carreno-Quintero, N., Kampranis, Sotirios & Bak, Søren, 2022, In: Frontiers in Plant Science. 13, 18 p., 1021907.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    A Single Oxidosqualene Cyclase Produces the Seco-Triterpenoid α-Onocerin

    Almeida, A., Dong, L., Khakimov, Bekzod, Bassard, J. A., Moses, T., Lota, F., Goossens, A., Appendino, G. & Bak, Søren, 2018, In: Plant Physiology. 176, 2, p. 1469-1484 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Plant triterpenoids with bond-missing skeletons: biogenesis, distribution and bioactivity

    Almeida, A., Dong, L., Appendino, G. & Bak, Søren, 2020, In: Natural Product Reports. 37, 22 p.

    Research output: Contribution to journal › Review › Research › peer-review

  21. Published

    Lessons learned from metabolic engineering in hairy roots: Transcriptome and metabolic profile changes caused by Rhizobium-mediated plant transformation in Cucurbitaceae species

    Almeida, A., Favero, Bruno Trevenzoli, Dong, L., Cárdenas, Pablo D., Saenz-Mata, J., Lütken, Henrik Vlk & Bak, Søren, Aug 2023, In: Plant Physiology and Biochemistry. 201, 8 p., 107797.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    In-depth Investigation on Triterpenoid Production from the Desert Plants Aloe vera (L.) Burm.f. and Opuntia robusta JC Wendl. Prompted by Their Low Specific Methane Production

    Almeida, A., Raadam, Morten Hessellund, Lopez-Villanueva, A., Omar Hernandez-De Lira, I. & Khakimov, Bekzod, 2023, In: BioEnergy Research. 16, p. 898–911

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Occurrence and biogenesis of seco-triterpenoids: A focus on the biosynthetic pathway of α-onocerin in Ononis spinosa

    Almeida Robles, A. R., 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  24. Published

    The Rise of the CRISPR/Cpf1 System for Efficient Genome Editing in Plants

    Alok, A., Sandhya, D., Jogam, P., Rodrigues, V., Bhati, K. K., Sharma, H. & Kumar, J., 2020, In: Frontiers in Plant Science. 11, 9 p., 264.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Role of the Colletotrichum acutatum sesquiterpene synthase CaTPS in the biosynthesis of sesquiterpenoids

    Amby, Daniel Buchvaldt, Manczak, T., Petersen, Mikael Agerlin, Sundelin, T., Weitzel, C., Grajewski, M., Simonsen, H. T. & Jensen, Birgit, 2016, In: Microbiology. 162, 10, p. 1773-1783

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Phylogenetic relationships in the Sorghum genus based on sequencing of the chloroplast and nuclear genes

    Ananda, G., Norton, S., Blomstedt, C., Furtado, A., Møller, Birger Lindberg, Gleadow, R. & Henry, R., 2021, In: Plant Genome. 14, 3, 16 p., e20123.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Transcript profiles of wild and domesticated sorghum under water-stressed conditions and the differential impact on dhurrin metabolism

    Ananda, G. K. S., Norton, S. L., Blomstedt, C., Furtado, A., Møller, Birger Lindberg, Gleadow, R. & Henry, R. J., 2022, In: Planta. 255, 2, 19 p., 51.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Variant analysis of grain size related genes in the genus Sorghum

    Ananda, G. K. S., Norton, S. L., Barnes, E., Furtado, A., Møller, Birger Lindberg, Gleadow, R. & Henry, R. J., 2023, In: Genetic Resources and Crop Evolution. 70, p. 1377-1394 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    The PSI-E subunit of photosystem I binds ferredoxin:NADP+ oxidoreductase

    Andersen, B., Scheller, H. V. & Møller, Birger Lindberg, 19 Oct 1992, In: FEBS Letters. 311, 2, p. 169-173 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Nearest neighbour analysis of the photosystem I subunits in barley and their binding of ferredoxin

    Andersen, B., Koch, B., Scheller, H. V., Okkels, J. S. & Møller, Birger Lindberg, 1990, Current Research in Photosynthesis. Baltscheffsky, M. (ed.). Vol. 1-4. p. 671-674 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  31. Published

    A photosystem I preparation from barley highly active in NADP+ photoreduction

    Andersen, B., Scheller, H. V., Lindqvist, Y., Schneider, G. & Møller, Birger Lindberg, 1992, Research in Photosynthesis. Murata, N. (ed.). Vol. I. p. 609-612 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  32. Published

    Integration of biosynthesis and long-distance transport establish organ-specific glucosinolate profiles in vegetative Arabidopsis

    Andersen, T. G., Nour-Eldin, Hussam Hassan, Fuller, V. L., Olsen, C. E., Burow, Meike & Halkier, Barbara Ann, 2013, In: Plant Cell. 25, 8, p. 3133-3145 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Thapsigargin - from Thapsia L. to Mipsagargin

    Andersen, T. B., Quinonero Lopez, C., Manczak, T., Martinez, K. A. & Simonsen, H. T., 2015, In: Molecules. 20, 4, p. 6113-6127 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Characterization of Genes Involved in Sesquiterpenoid Biosynthesis from Thapsia garganica and Thapsia laciniata

    Andersen, T. B., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 223 p.

    Research output: Book/Report › Ph.D. thesis › Research

  35. Published

    Evolution of NADPH-cytochrome P450 oxidoreductases (POR) in Apiales - POR 1 is missing

    Andersen, T. B., Hansen, N. B., Laursen, Tomas, Weitzel, C. & Simonsen, H. T., 2016, In: Molecular Phylogenetics and Evolution. 98, p. 21-28 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Localization and in-vivo characterization of Thapsia garganica CYP76AE2 indicates a role in thapsigargin biosynthesis

    Andersen, T. B., Martinez-Swatson, K. A., Rasmussen, S. A., Boughton, B. A., Jørgensen, Kirsten, Andersen-Ranberg, Johan, Nyberg, N., Christensen, Søren Brøgger & Simonsen, H. T., 2017, In: Plant Physiology. 174, 1, p. 56-72 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Expanding the landscape of diterpene structural diversity by stereochemically controlled combinatorial biosynthesis

    Andersen-Ranberg, Johan, Kongstad, Kenneth Thermann, Nielsen, M. T., Bjerg Jensen, N., Pateraki, Irini, Bach, S. S., Hamberger, B., Zerbe, P., Stærk, Dan, Bohlmann, J., Møller, Birger Lindberg & Hamberger, B. R., 2016, In: Angewandte Chemie International Edition. 55, 6, p. 2142-2146 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Synthesis of C-glucosylated octaketide anthraquinones in Nicotiana benthamiana using a multispecies-based biosynthetic pathway

    Andersen-Ranberg, Johan, Kongstad, Kenneth Thermann, Nafisi, M., Stærk, Dan, Okkels, F. T., Mortensen, U. H., Møller, Birger Lindberg, Frandsen, R. J. N. & Kannangara, R. M., 2017, In: ChemBioChem. 18, 19, p. 1893-1897 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Weed control with laser beams: An eco-friendly alternative to herbicides and mechanical weed control

    Andreasen, Christian, Rakhmatulin, I., Saberi, M. & Zhang, Zongyi, 2024, In: A I P Conference Proceedings Series. 294, 1, 6 p., 040001.

    Research output: Contribution to journal › Conference article › Research › peer-review

  40. Published

    Differential effects of low-temperature inhibition on the propylene induced autocatalysis of ethylene production, respiration and ripening of 'Hayward' kiwifruit

    Antunes, M. D. C., Pateraki, I., Kanellis, A. K., Sfakiotakis, E. M. & Pateraki, Irini, 1 Jan 2000, In: Journal of Horticultural Science and Biotechnology. 75, 5, p. 575-580 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Polymorphisms in cyanogenic glucoside and cyano-amino acid content in natural accessions of common vetch (Vicia sativa L.) and selection for improved agronomic performance

    Aouida, M., Rook, F., Maimann, A. B., Sánchez-Pérez, R., Abid, G., Fauconnier, M. L. & Jebara, M., 1 Jun 2019, In: Plant Breeding. 138, 3, p. 348-359

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Dynamic Metabolons in the Anthocyanin Pathway Studied by Proximity Labeling

    Aravena Calvo, Javiera Patricia, 2023, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 151 p.

    Research output: Book/Report › Ph.D. thesis › Research

  43. Published

    First-principles identification of C-methyl-scyllo-inositol (mytilitol) – A new species-specific metabolite indicator of geographic origin for marine bivalve molluscs (Mytilus and Ruditapes spp.)

    Aru, Violetta, Motawie, Mohammed Saddik, Khakimov, Bekzod, Sørensen, Klavs Martin, Møller, Birger Lindberg & Engelsen, Søren Balling, 2020, In: Food Chemistry. 328, 7 p., 126959.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Chemoenzymatic synthesis of 3'-deoxy-3'-(4-substituted-triazol-1-YL)-5-methyluridine

    Arya, A., Mathur, D., Tyagi, A., Kumar, R., Kumar, V., Olsen, C. E., Saxena, R. K. & Prasad, A. K., 2013, In: Nucleosides, Nucleotides and Nucleic Acids. 32, 12, p. 646-659 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Identification of nitric oxide mediated defense signaling and its microRNA mediated regulation during Phytophthora capsici infection in black pepper

    Asha, S., Kattupalli, D., Vijayanathan, Mallika & Soniya, E. V., 2024, In: Physiology and Molecular Biology of Plants. 30, p. 33-47 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Isoprenoid biosynthesis in the diatom Haslea ostrearia

    Athanasakoglou, A., Grypioti, E., Michailidou, S., Ignea, C., Makris, A. M., Kalantidis, K., Massé, G., Argiriou, A., Verret, F. & Kampranis, Sotirios, Apr 2019, In: New Phytologist. 222, 1, p. 230-243

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Diatom isoprenoids: Advances and biotechnological potential

    Athanasakoglou, A. & Kampranis, Sotirios, 2019, In: Biotechnology Advances. 37, 8, 12 p., 107417.

    Research output: Contribution to journal › Review › Research › peer-review

  48. Published

    Isoprenoids out of the blue: Elucidation of isoprenoid biosynthetic pathways in marine organisms

    Athanasakoglou, A., 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  49. Published

    Heterologous stable expression of terpenoid biosynthetic genes using the moss Physcomitrella patens

    Bach, S. S., King, B. C., Zhan, X., Simonsen, H. T. & Hamberger, B. R., 2014, Plant isoprenoids: methods and protocols. Rodríguez-Concepción, M. (ed.). Springer, p. 257-271 15 p. (Methods in Molecular Biology, Vol. 1153).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  50. Published

    Exploring two plant hosts for expression of diterpenoid pathway genes: stable expression in Physcomitrella patens and transient expression in Nicotiana benthamiana

    Bach, S. S., 2013, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 163 p.

    Research output: Book/Report › Ph.D. thesis › Research

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