Section for Plant Biochemistry

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  1. 2016
  2. Published

    Insight into biochemical characterization of plant sesquiterpene synthases

    Manczak, T. & Simonsen, H. T., 2016, In: Analytical Chemistry Insights. 11, Suppl. 1, p. 1-7 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Domesticating deadly carrots: Predicting the biosynthetic pathway of thapsigargins for the treatment of solid tumors

    Martinez, K. A., Simonsen, H. T., Rønsted, Nina, Andersen, T. B., Barnes, Christopher James, Boughton, B. & Cozzi, F., 2016, In: Planta Medica. 81, S 01, p. S1-S381

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Fusion of ferredoxin and cytochrome P450 enables direct light-driven biosynthesis

    Mellor, Silas Busck, Nielsen, A. J. Z., Burow, Meike, Motawie, Mohammed Saddik, Jakubauskas, D., Møller, Birger Lindberg & Jensen, Poul Erik, 2016, In: ACS chemical biology. 11, 7, p. 1862-1869 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Regulation of MIR165/166 by class II and class III homeodomain leucine zipper proteins establishes leaf polarity

    Merelo, P., Ram, H., Caggiano, M. P., Ohno, C., Ott, F., Straub, D., Graeff, M., Cho, S. K., Yang, S. W., Wenkel, Stephan & Heisler, M. G., 2016, In: Proceedings of the National Academy of Sciences of the United States of America. 113, 42, p. 11973-11978 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Engineering of methionine chain elongation part of glucoraphanin pathway in E. coli

    Mirza, N. M. A., Crocoll, C., Olsen, C. E. & Halkier, Barbara Ann, 2016, In: Metabolic Engineering. 35, p. 31-37 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Links of conformational sampling to functional plasticity and clinical phenotypes by single molecule studies

    Moses, M. E., Thodberg, S., Bavishi, K., Eiersholt, S., Li, D., Stamou, Dimitrios, Møller, Birger Lindberg, Laursen, Tomas & Hatzakis, Nikos, 2016, In: Biophysical Society. Annual Meeting. Abstracts. 110, 3, p. 397A 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research

  8. Published

    General and stereocontrolled approach to the chemical synthesis of naturally occurring cyanogenic glucosides

    Møller, Birger Lindberg, Olsen, C. E. & Motawie, Mohammed Saddik, 2016, In: Journal of Natural Products. 79, 4, p. 1198-1202 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Extending the biosynthetic repertoires of cyanobacteria and chloroplasts

    Nielsen, A. J. Z., Mellor, Silas Busck, Vavitsas, K., Wlodarczyk, A. J., Gnanasekaran, Thiyagarajan, Perestrello Ramos H de Jesus, M., King, B. C., Bakowski, K. & Jensen, Poul Erik, 2016, In: Plant Journal. 87, 1, p. 87-102 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Dhurrin metabolism in the developing grain of Sorghum bicolor (L.) Moench investigated by metabolite profiling and novel clustering analyses of time-resolved transcriptomic data

    Nielsen, L. J., Stuart, P., Picmanova, M., Rasmussen, Simon, Olsen, C. E., Harholt, J., Møller, Birger Lindberg & Bjarnholt, Nanna, 2016, In: BMC Genomics. 17, 24 p., 1021.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Glucosinolate diversity within a phylogenetic framework of the tribe Cardamineae (Brassicaceae) unraveled with HPLC-MS/MS and NMR-based analytical distinction of 70 desulfoglucosinolates

    Olsen, C. E., Huang, X., Hansen, Cecilie Ida Cetti, Cipollini, D., Ørgaard, Marian, Matthes, A., Geu-Flores, Fernando, Koch, M. A. & Agerbirk, Niels, 2016, In: Phytochemistry. 132, p. 33-56 24 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Microbial production of next-generation stevia sweeteners

    Olsson, K., Carlsen, S., Semmler, A., Simón, E., Mikkelsen, M. D. & Møller, Birger Lindberg, 2016, In: Microbial Cell Factories. 15, 14 p., 207.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Lepidopteran defence droplets - a composite physical and chemical weapon against potential predators

    Pentzold, S., Zagrobelny, Mika, Khakimov, Bekzod, Engelsen, Søren Balling, Clausen, Henrik, Petersen, Bent L, Borch, J., Møller, Birger Lindberg & Bak, Søren, 2016, In: Scientific Reports. 6, 11 p., 22407 .

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Methyl transfer in glucosinolate biosynthesis mediated by indole glucosinolate O-Methyltransferase 5

    Pfalz, M., Mukhaimar, M., Perreau, F., Kirk, J., Hansen, Cecilie Ida Cetti, Olsen, C. E., Agerbirk, Niels & Kroymann, J., 2016, In: Plant Physiology. 172, 4, p. 2190-2203 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Apiose: one of nature's witty games

    Picmanova, M. & Møller, Birger Lindberg, 2016, In: Glycobiology. 26, 5, p. 430-442 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Endogenous Turnover of Cyanogenic Glycosides in Plants

    Picmanova, M., 2016, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 170 p.

    Research output: Book/Report › Ph.D. thesis › Research

  17. Published

    Metabolic Engineering of Chemical Defence Pathways in Plant Disease Control

    Rook, F., 2016, Plant Pathogen Resistance Biotechnology. Collinge, D. B. (ed.). Wiley-Blackwell, p. 71-89 19 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  18. Published

    Locking-to-unlocking system is an efficient strategy to design DNA/silver nanoclusters (AgNCs) probe for human miRNAs

    Shah, P., Choi, S. W., Kim, H., Cho, S. K., Bhang, Y., Ryu, M. Y., Thulstrup, Peter Waaben, Bjerrum, Morten Jannik & Yang, S. W., 2016, In: Nucleic Acids Research. 44, 6, 11 p., e57.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Arabidopsis Tóxicos en Levadura 78 (AtATL78) mediates ABA-dependent ROS signaling in response to drought stress

    Suh, J. Y., Kim, S. J., Oh, T. R., Cho, S. K., Yang, S. W. & Kim, W. T., 2016, In: Biochemical and Biophysical Research Communications. 469, 1, p. 8-14 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    High-resolution PTP1B inhibition profiling combined with high-performance liquid chromatography - high-resolution mass spectrometry - solid-phase extraction - nuclear magnetic resonance spectroscopy: Proof-of-concept and antidiabetic constituents in crude extract of Eremophila lucida

    Tahtah, Y., Wubshet, S. G., Kongstad, Kenneth Thermann, Heskes, A. M., Pateraki, Irini, Møller, Birger Lindberg, Jäger, A. & Stærk, Dan, 2016, In: Fitoterapia. 110, p. 52-58 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    The Arabidopsis NPF3 protein is a GA transporter

    Tal, I., Zhang, Y., Jørgensen, M. E., Pisanty, O., Barbosa, I. C. R., Zourelidou, M., Regnault, T., Crocoll, C., Olsen, C. E., Weinstain, R., Schwechheimer, C., Halkier, Barbara Ann, Nour-Eldin, Hussam Hassan, Estelle, M. & Shani, E., 2016, In: Nature Communications. 7, 20 p., 11486.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    High throughput screening of starch structures using carbohydrate microarrays

    Tanackovic, V., Rydahl, M. G., Pedersen, H. L., Motawie, Mohammed Saddik, Shaik, S. S., Mikkelsen, M. D., Jensen, S. L., Fangel, J. U., Willats, W. G. T. & Blennow, Andreas, 2016, In: Scientific Reports. 6, 9 p., 30551.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Anthelmintic activity of chicory (Cichorium intybus): in vitro effects on swine nematodes and relationship to sesquiterpene lactone composition

    Williams, Andrew Richard, Peña-Espinoza, M. A., Boas, U., Simonsen, H. T., Enemark, H. L. & Thamsborg, Stig Milan, May 2016, In: Parasitology. 143, 6, p. 770-777 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Metabolic engineering of light-driven cytochrome P450 dependent pathways into Synechocystis sp. PCC 6803

    Wlodarczyk, A. J., Gnanasekaran, Thiyagarajan, Nielsen, A. J. Z., Nokolunga, N., Mellor, Silas Busck, Manja, L., Frederik Bang Thøfner, J., Olsen, C. E., Motawie, Mohammed Saddik, Burow, Meike, Pribil, Mathias, Feussner, I., Møller, Birger Lindberg & Jensen, Poul Erik, 2016, In: Metabolic Engineering. 33, p. 1-11 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Identification of PTP1B and α-glucosidase inhibitory serrulatanes from Eremophila spp. by combined use of dual high-resolution PTP1B and α-glucosidase inhibition profiling and HPLC-HRMS-SPE-NMR

    Wubshet, S. G., Tahtah, Y., Heskes, A. M., Kongstad, Kenneth Thermann, Pateraki, Irini, Hamberger, B. R., Møller, Birger Lindberg & Stærk, Dan, 2016, In: Journal of Natural Products. 79, 4, p. 1063-1072 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Functional expression and characterization of plant ABC transporters in Xenopus laevis oocytes for transport engineering purposes

    Xu, Deyang, Veres, D., Belew, Zeinu Mussa, Olsen, C. E., Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2016, Synthetic biology and metabolic engineering in plants and microbes : Part B: Plant metabolism. p. 207-224 8 p. (Methods in Enzymology, Vol. 576).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  27. Published

    Multiple essential MT1-MMP functions in tooth root formation, dentinogenesis, and tooth eruption

    Xu, H., Snider, T. N., Wimer, H. F., Yamada, S. S., Yang, T., Holmbeck, Kenn & Foster, B. L., 2016, In: Matrix Biology. 52-54, p. 266-283 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Transcriptome sequencing in narrow-leafed lupin (Lupinus angustifolius): combining short- and long-read sequencing platforms

    Yang, T., Nagy, I., Asp, T. & Geu-Flores, Fernando, 2016, In: Planta Medica. 82, S 01, 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  29. 2015
  30. Published

    Derivatization of isothiocyanates and their reactive adducts for chromatographic analysis

    Agerbirk, Niels, De Nicola, G. R., Olsen, C. E., Mueller, C. & Iori, R., 2015, In: Phytochemistry. 118, p. 109-115 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Glucosinolate hydrolysis products in the crucifer Barbarea vulgaris include a thiazolidine-2-one from a specific phenolic isomer as well as oxazolidine-2-thiones

    Agerbirk, Niels & Olsen, C. E., 2015, In: Phytochemistry. 115, p. 143-151 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Multiple hydroxyphenethyl glucosinolate isomers and their tandem mass spectrometric destinction in a geographically structured polymorphism in the crucifer Barbarea vulgaris

    Agerbirk, Niels, Olsen, C. E., Heimes, C., Christensen, S., Bak, Søren & Hauser, T. P., 2015, In: Phytochemistry. 115, p. 130-142 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Characterization of Genes Involved in Sesquiterpenoid Biosynthesis from Thapsia garganica and Thapsia laciniata

    Andersen, T. B., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 223 p.

    Research output: Book/Report › Ph.D. thesis › Research

  34. Published

    Thapsigargin - from Thapsia L. to Mipsagargin

    Andersen, T. B., Quinonero Lopez, C., Manczak, T., Martinez, K. A. & Simonsen, H. T., 2015, In: Molecules. 20, 4, p. 6113-6127 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    MiRNA Biogenesis and Intersecting Pathways

    Ben Chaabane, S., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 79 p.

    Research output: Book/Report › Ph.D. thesis › Research

  36. Published

    Nanodisc films for membrane protein studies by neutron reflection: effect of the protein scaffold choice

    Bertram, N., Laursen, Tomas, Barker, R., Bavishi, K., Møller, Birger Lindberg & Cardenas Gomez, M., 2015, In: Langmuir. 31, 30, p. 8386-8391 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Stable heterologous expression of biologically active terpenoids in green plant cells

    Binti Khairul Ikram, N. K., Zhan, X., Pan, X., King, B. C. & Simonsen, H. T., 2015, In: Frontiers in Plant Science. 6, 10 p., 129.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    CYP76C1 (Cytochrome P450)-mediated linalool metabolism and the formation of volatile and soluble linalool oxides in Arabidopsis flowers: a strategy for defense against floral antagonists

    Boachon, B., Junker, R. R., Miesch, L., Bassard, J. A., Höfer, R., Caillieaudeaux, R., Seidel, D. E., Lesot, A., Heinrich, C., Ginglinger, J., Allouche, L., Vincent, B., Wahyuni, D. S. C., Paetz, C., Beran, F., Miesch, M., Schneider, B., Leiss, K. & Werck-Reichhart, D., 2015, In: The Plant Cell. 27, 10, p. 2972-2990 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Large-scale phenomics identifies primary and fine-tuning roles for CRKs in responses related to oxidative stress

    Bourdais, G., Burdiak, P., Gauthier, A., Nitsch, L., Salojärvi, J., Rayapuram, C., Idänheimo, N., Hunter, K., Kimura, S., Merilo, E., Vaattovaara, A., Oracz, K., Kaufholdt, D., Pallon, A., Anggoro, D. T., Glów, D., Lowe, J., Zhou, J., Mohammadi, O., Puukko, T. & 13 others, Albert, A., Lang, H., Ernst, D., Kollist, H., Brosché, M., Durner, J., Borst, J. W., Collinge, David B., Karpinski, S., Lyngkjær, M. F., Robatzek, S., Wrzaczek, M. & Kangasjärvi, J., 2015, In: P L o S Genetics. 11, 7, 36 p., e1005373.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    PUB22 and PUB23 U-BOX E3 ligases directly ubiquitinate RPN6, a 26S proteasome lid subunit, for subsequent degradation in Arabidopsis thaliana

    Cho, S. K., Bae, H., Ryu, M., Yang, S. W. & Kim, W. T., 2015, In: Biochemical and Biophysical Research Communications. 464, 4, p. 994-999 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    The bifurcation of the cyanogenic glucoside and glucosinolate biosynthetic pathways

    Sørensen, Mette, Kannangara, R. M., Olsen, C. E., Blomstedt, C. K., Gleadow, R. M., Jørgensen, Kirsten, Bak, Søren, Motawie, Mohammed Saddik & Møller, Birger Lindberg, 2015, In: The Plant Journal. 84, 3, p. 558-573 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Deciphering mineral homeostasis in barley seed transfer cells at transcriptional level

    Darbani Shirvanehdeh, B., Noeparvar, S. & Borg, S., 2015, In: PLoS ONE. 10, 11, 26 p., e0141398.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    How does garlic mustard lure and kill the west virginia white butterfly?

    Davis, S. L., Frisch, T., Bjarnholt, Nanna & Cipollini, D., 2015, In: Journal of Chemical Ecology. 41, 10, p. 948-955 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Chemo- and regioselective functionalization of nortrilobolide: application for semi-synthesis of the natural product 2-acetoxytrilobolide

    Doan, T. Q. N., Crestey, F., Olsen, C. E. & Christensen, Søren Brøgger, 2015, In: Journal of Natural Products. 78, 6, p. 1406-1414

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Evolution of substrate recognition sites (SRSs) in cytochromes P450 from Apiaceae exemplified by the CYP71AJ subfamily

    Dueholm, B., Krieger, C., Drew, D. P., Olry, A., Kamo, T., Taboureau, O., Weitzel, C., Bourgaud, F., Hehn, A. & Simonsen, H. T., 2015, In: BMC Evolutionary Biology. 15, 14 p., 122.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    MicroProteins: small size - big impact

    qmd783, qmd783, Straub, D., Graeff, M. & Wenkel, Stephan, 2015, In: Trends in Plant Science. 20, 8, p. 477–482 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Metabolic engineering of Synechocystis sp. PCC 6803 for production of the plant diterpenoid manoyl oxide

    Englund, E., Andersen-Ranberg, Johan, Miao, R., Hamberger, B. R. & Lindberg, P., 2015, In: A C S Synthetic Biology. 4, 12, p. 1270-1278 9 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  48. Published

    Global medicinal uses of Euphorbia L. (Euphorbiaceae)

    Ernst, M., Grace, O. M., Saslis Lagoudakis, H., Nilsson, N., Simonsen, H. T. & Rønsted, Nina, 2015, In: Journal of Ethnopharmacology. 176, p. 90-101 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Diversified glucosinolate metabolism: biosynthesis of hydrogen cyanide and of the hydroxynitrile glucoside alliarinoside in relation to sinigrin metabolism in Alliaria petiolata

    Frisch, T., Motawie, Mohammed Saddik, Olsen, C. E., Agerbirk, Niels, Møller, Birger Lindberg & Bjarnholt, Nanna, 2015, In: Frontiers in Plant Science. 6, 16 p., 926.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Vanillin-bioconversion and bioengineering of the most popular plant flavor and its De Novo biosynthesis in the vanilla orchid

    Gallage, N. J. & Møller, Birger Lindberg, 2015, In: Molecular Plant. 8, 1, p. 40-57 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Heterologous expression of the isopimaric acid pathway in Nicotiana benthamiana and the effect of N-terminal modifications of the involved cytochrome P450 enzyme

    Gnanasekaran, Thiyagarajan, Vavitsas, K., Andersen-Ranberg, Johan, Nielsen, A. J. Z., Olsen, C. E., Hamberger, B. R. & Jensen, Poul Erik, 2015, In: Journal of Biological Engineering. 9, 10 p., 24.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Glycoproteomic analysis of seven major allergenic proteins reveals novel post-translational modifications

    Halim, Adnan, Carlsson, M. C., Mathiesen, C. B. K., Brand, S., Möller, S. R., Olsen, C. E., Vakhrushev, Sergey, Brimnes, J., Wurtzen, P. A., Ipsen, H., Petersen, Bent L & Wandall, Hans H., 2015, In: Molecular and Cellular Proteomics. 14, 1, p. 191-204 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Genome-wide association study of production and stability traits in barley cultivated under future climate scenarios

    Ingvordsen, C. H., Backes, G., Lyngkjær, M. F., Peltonen-Sainio, P., Jahoor, A., Mikkelsen, T. N. & Jørgensen, R. B., 2015, In: Molecular Breeding. 35, 14 p., 84.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Significant decrease in yield under future climate conditions: stability and production of 138 spring barley accessions

    Ingvordsen, C. H., Backes, G., Lyngkjær, M. F., Peltonen-Sainio, P., Jensen, J. D., Jalli, M., Jahoor, A., Rasmussen, M., Mikkelsen, T. N., Stockmarr, A. & Bagger Jørgensen, R., 2015, In: European Journal of Agronomy. 63, p. 105-113 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Cesium toxicity alters MicroRNA processing and AGO1 expressions in Arabidopsis thaliana

    Jung, I. L., Ryu, M., Cho, S. K., Shah, P., Lee, J. H., Bae, H., Kim, I. G. & Yang, S. W., 2015, In: P L o S One. 10, 5, 17 p., e0125514.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    A functional EXXEK motif is essential for proton coupling and active glucosinolate transport by NPF2.11

    Jørgensen, M. E., Olsen, C. E., Geiger, D., Mirza, Osman Asghar, Halkier, Barbara Ann & Nour-Eldin, Hussam Hassan, 2015, In: Plant and Cell Physiology. 56, 12, p. 2340-2350 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    DESI-MS imaging of metabolites in various plant materials – a matter of sample preparation

    Kato, L., Rook, F., Møller, Birger Lindberg, Hansen, S. H. & Janfelt, Christian, 2015.

    Research output: Contribution to conference › Poster › Research

  58. Published

    Discovery of a P450-catalyzed step in vindoline biosynthesis: a link between the aspidosperma and eburnamine alkaloids

    Kellner, F., Geu-Flores, Fernando, Sherden, N. H., Brown, S., Foureau, E., Courdavault, V. & O'Connor, S. E., 2015, In: Chemical Communications. 51, 36, p. 7626-7628 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    Identification and genome organization of saponin pathway genes from a wild crucifer, and their use for transient production of saponins in Nicotiana benthamiana

    Khakimov, Bekzod, Poulsen, V. K., Erthmann, P. Ø., Fukushima, E. O., Augustin, J. M., Olsen, C. E., Scholtalbers, J., Volpin, H., Andersen, S. B., Hauser, T. P., Muranaka, T. & Bak, Søren, 2015, In: The Plant Journal. 84, 3, p. 478-490 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    Lotus japonicus flowers are defended by a cyanogenic β-glucosidase with highly restricted expression to essential reproductive organs

    Lai, D., Picmanova, M., Hachem, M. A., Motawie, Mohammed Saddik, Olsen, C. E., Møller, Birger Lindberg, Rook, F. & Takos, A. M., 2015, In: Plant Molecular Biology. 89, 1-2, p. 21-34 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Plasticity of specialized metabolism as mediated by dynamic metabolons

    Laursen, Tomas, Møller, Birger Lindberg & Bassard, J. A., 2015, In: Trends in Plant Science. 20, 1, p. 20-32 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Iminolactones from Schizophyllum commune

    Liu, X., Frydenvang, Karla Andrea, Liu, H., Zhai, L., Chen, M., Olsen, C. E. & Christensen, Søren Brøgger, 2015, In: Journal of Natural Products. 78, 5, p. 1165-1168 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Cu(I)-catalyzed efficient synthesis of 2′-Triazolo-nucleoside conjugates

    Mathur, D., Rana, N., Olsen, C. E., Parmar, V. S. & Prasad, A. K., 2015, In: Journal of Heterocyclic Chemistry. 52, 3, p. 701-710 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Accumulation of secondary metabolites in healthy and diseased barley, grown under future climate levels of CO2, ozone and temperature

    Mikkelsen, B. L., Olsen, C. E. & Lyngkjær, M. F., 2015, In: Phytochemistry. 118, p. 162-173 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    Complex interplay of future climate levels of CO2, ozone and temperature on susceptibility to fungal diseases in barley

    Mikkelsen, B. L., Bagger Jørgensen, R. & Lyngkjær, M. F., 2015, In: Plant Pathology. 64, 2, p. 319-327 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    Taste detection of the non-volatile isothiocyanate moringin results in deterrence to glucosinolate-adapted insect larvae

    Müller, C., van Loon, J., Ruschioni, S., De Nicola, G. R., Olsen, C. E., Iori, R. & Agerbirk, Niels, 2015, In: Phytochemistry. 118, p. 139-148 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    Acetylation of cell wall is required for structural integrity of the leaf surface and exerts a global impact on plant stress responses

    Nafisi, M., Stranne, M., Fimognari, L., Atwell, S., Martens, Helle Jakobe, Pedas, P. R., Hansen, S. F., Nawrath, C., Scheller, H. V., Kliebenstein, D. J. & Sakuragi, Y., 2015, In: Frontiers in Plant Science. 6, 13 p., 550.

    Research output: Contribution to journal › Journal article › Research › peer-review

  68. Published

    Interplays between the cell wall and phytohormones in interaction between plants and necrotrophic pathogens

    Nafisi, M., Fimognari, L. & Sakuragi, Y., 2015, In: Phytochemistry. 112, p. 63-71 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    Utilization of a high-throughput shoot imaging system to examine the dynamic phenotypic responses of a C4 cereal crop plant to nitrogen and water deficiency over time

    Neilson, Elizabeth Heather Jakobsen, Edwards, A. M., Blomstedt, C. K., Berger, B., Møller, Birger Lindberg & Gleadow, R. M., 2015, In: Journal of Experimental Botany. 66, 7, 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    Metabolism of the Cyanogenic Glucoside Dhurrin in Sorghum bicolor L. (Moench)

    Nielsen, L. J., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 151 p.

    Research output: Book/Report › Ph.D. thesis › Research

  71. Published

    Scent emission profiles from Darwin's orchid - Angraecum sesquipedale: investigation of the aldoxime metabolism using clustering analysis

    Nielsen, L. J. & Møller, Birger Lindberg, 2015, In: Phytochemistry. 120, p. 3-18 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    Assembly of highly standardized gene fragments for high-level production of porphyrins in E. coli

    Nielsen, M. T., Madsen, K. M., Seppälä, S., Riisberg, L., Harrison, S. J., Møller, Birger Lindberg & Nørholm, M. H. H., 2015, In: A C S Synthetic Biology. 4, 3, p. 274-282 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    Eco-efficient production of spring barley in a changed climate: A Life Cycle Assessment including primary data from future climate scenarios

    Niero, M., Ingvordsen, C. H., Peltonen-Sainio, P., Jalli, M., Lyngkjær, M. F., Hauschild, M. Z. & Jørgensen, R. B., 2015, In: Agricultural Systems. 136, p. 46-60 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    Sclareol production in the moss Physcomitrella patens and observations on growth and terpenoid biosynthesis

    Pan, X., Han, L., Zhang, Y., Chen, D. & Simonsen, H. T., 22 May 2015, In: Plant Biotechnology Reports. 9, 3, p. 149-159 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    Cytochromes P450 for terpene functionalisation and metabolic engineering

    Pateraki, Irini, Heskes, A. M. & Hamberger, B. R., 2015, Biotechnology of Isoprenoids. Springer, p. 107-139 33 p. (Advances in Biochemical Engineering. Biotechnology, Vol. 148).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  76. Published

    Standards for plant synthetic biology: a common syntax for exchange of DNA parts

    Patron, N. J., Orzaez, D., Marillonnet, S., Warzecha, H., Matthewman, C., Youles, M., Raitskin, O., Leveau, A., Farré, G., Rogers, C., Smith, A., Hibberd, J., Webb, A. A. R., Locke, J., Schornack, S., Ajioka, J., Baulcombe, D. C., Zipfel, C., Kamoun, S., Jones, J. D. G. & 38 others, Kuhn, H., Robatzek, S., Van Esse, H. P., Sanders, D., Oldroyd, G., Martin, C., Field, R., O'Connor, S., Fox, S., Wulff, B., Miller, B., Breakspear, A., Radhakrishnan, G., Delaux, P., Loqué, D., Granell, A., Tissier, A., Shih, P., Brutnell, T. P., Quick, W. P., Rischer, H., Fraser, P. D., Aharoni, A., Raines, C., South, P. F., Ané, J., Hamberger, B. R., Langdale, J., Stougaard, J., Bouwmeester, H., Udvardi, M., Murray, J. A. H., Ntoukakis, V., Schäfer, P., Denby, K., Edwards, K. J., Osbourn, A. & Haseloff, J., 2015, In: New Phytologist. 208, 1, p. 13-19 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Metabolism, excretion and avoidance of cyanogenic glucosides in insects with different feeding specialisations

    Pentzold, S., Zagrobelny, Mika, Bjarnholt, Nanna, Kroymann, J., Vogel, H., Olsen, C. E., Møller, Birger Lindberg & Bak, Søren, 2015, In: Insect Biochemistry and Molecular Biology. 66, p. 119-128 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    NMR characterization of chemically synthesized branched alpha-dextrin model compounds

    Petersen, B. O., Motawie, Mohammed Saddik, Møller, Birger Lindberg, Hindsgaul, O. & Meier, S., 2015, In: Carbohydrate Research. 403, p. 149-156 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    Sesquiterpene lactone containing extracts from two cultivars of forage chicory (Cichorium intybus) show distinctive chemical profiles and in vitro activity against Ostertagia ostertagi

    Peña-Espinoza, M., Boas, U., Williams, Andrew Richard, Thamsborg, Stig Milan, Simonsen, H. T. & Enemark, H., 2015, In: International Journal for Parasitology: Drugs and Drug Resistance. 5, 3, p. 191-200 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    A recycling pathway for cyanogenic glycosides evidenced by the comparative metabolic profiling in three cyanogenic plant species

    Picmanova, M., Neilson, Elizabeth Heather Jakobsen, Motawie, Mohammed Saddik, Olsen, C. E., Agerbirk, Niels, Gray, C. J., Flitsch, S., Meier, S., Silvestro, D., Jørgensen, Kirsten, Sánchez Pérez, R., Møller, Birger Lindberg & Bjarnholt, Nanna, 2015, In: Biochemical Journal. 469, 3, p. 375-389 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    Different Mechanisms Confer Gradual Control and Memory at Nutrient- and Stress-Regulated Genes in Yeast

    Rienzo, A., Poveda Huertes, Daniel, Aydin, S., Buchler, N. E., Pascual-Ahuir, A. & Proft, M., Nov 2015, In: Molecular and Cellular Biology. 35, 21, p. 3669-83 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    DNA/RNA chimera templates improve the emission intensity and target the accessibility of silver nanocluster-based sensors for human microRNA detection

    Shah, P., Choi, S. W., Kim, H., Cho, S. K., Thulstrup, Peter Waaben, Bjerrum, Morten Jannik, Bhang, Y., Ahn, J. C. & Yang, S. W., 2015, In: Analyst. 140, 10, p. 3422-3430 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    A multivariate approach for high throughput pectin profiling by combining glycan microarrays with monoclonal antibodies

    Sousa, A. G., Isager Ahl, Louise, Pedersen, H. L., Fangel, J. U., Sørensen, S. O. & Willats, W. G. T., 2015, In: Carbohydrate Research. 409, p. 41-47 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    Design and synthesis of triazole-linked xylo-nucleoside dimers

    Srivastava, S., Singh, S. K., Sharma, V. K., Mangla, P., Olsen, C. E. & Prasad, A. K., 2015, In: Nucleosides, Nucleotides and Nucleic Acids. 34, 6, p. 388-399 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Development of a fluorescence-based assay for functional studies of transporter proteins on the single molecule level

    Veshaguri, S., Christensen, S. F., Møller, M. P., Ghale, G., Lohr, C., Christensen, A. L., Tutkus, M., Kemmer, G. C., Jørgensen, I. L., Justesen, B. H., Curran, P., Pomorski, Thomas Guenther, Mindell, J. & Stamou, Dimitrios, 2015, In: Biophysical Journal. 108, 2, Supplement 1, p. 187a 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  86. Published

    Cytochrome P450-enzymes involved in the biosynthesis of mono- and sesquiterpenes

    Weitzel, C. & Simonsen, H. T., 2015, In: Phytochemistry Reviews. 14, 1, p. 7-24 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    Meta-analysis of Arabidopsis KANADI1 direct target genes identifies basic growth-promoting module acting upstream of hormonal signaling pathways

    Xie, Y., Straub, D., qmd783, qmd783, Brandt, R., Stahl, M., Martinez-Garcia, J. F. & Wenkel, Stephan, 2015, In: Plant Physiology. 35 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Volatiles from the burnet Moth Zygaena filipendulae (Lepidoptera) and Associated flowers, and their involvement in mating communication

    Zagrobelny, Mika, Simonsen, H. T., Olsen, C. E., Bak, Søren & Møller, Birger Lindberg, 2015, In: Physiological Entomology. 40, 4, p. 284-295 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Stable expression of a bifunctional diterpene synthase in the chloroplast of Chlamydomonas reinhardtii

    Zedler, J. A. Z., Gangl, D., Hamberger, B. R., Purton, S. & Robinson, C., 2015, In: Journal of Applied Phycology. 27, 6, p. 2271-2277 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Additional diterpenes from Physcomitrella patens synthesized by copalyl diphosphate/kaurene synthase (PpCPS/KS)

    Zhan, X., Bach, S. S., Hansen, N. L., Lunde, C. & Simonsen, H. T., 2015, In: Plant Physiology and Biochemistry. 96, p. 110-114 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    Expression patterns, molecular markers and genetic diversity of insect-susceptible and resistant Barbarea genotypes by comparative trnscriptome analysis

    Zhang, X., Liu, T., Wei, X., Qiu, Y., Song, J., Wang, H., Shen, D., Agerbirk, Niels & Li, X., 2015, In: B M C Genomics. 16, 16 p., 486.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. 2014
  93. Published

    Specific glucosinolate analysis reveals variable levels of epimeric glucobarbarins, dietary precursors of 5-phenyloxazolidine-2-thiones, in watercress types with contrasting chromosime numbers

    Agerbirk, Niels, Olsen, C. E., Cipollini, D., Ørgaard, Marian, Linde-Laursen, I. & Chew, F. S., 2014, In: Journal of Agricultural and Food Chemistry. 62, 39, p. 9586-9596 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Øvelsesvejledning Biokemi 1

    Agerbirk, Niels & Bjergegaard, C., 2014, 10 ed. Institut for Fødevarevidenskab, Det Natur- og Biovidenskabelige Fakultet, Københavns Universitet.

    Research output: Book/Report › Compendium/lecture notes › Education

  95. Published

    Heterologous stable expression of terpenoid biosynthetic genes using the moss Physcomitrella patens

    Bach, S. S., King, B. C., Zhan, X., Simonsen, H. T. & Hamberger, B. R., 2014, Plant isoprenoids: methods and protocols. Rodríguez-Concepción, M. (ed.). Springer, p. 257-271 15 p. (Methods in Molecular Biology, Vol. 1153).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  96. Published

    High-throughput testing of terpenoid biosynthesis candidate genes using transient expression in Nicotiana benthamiana

    Bach, S. S., Bassard, J. A., Andersen-Ranberg, Johan, Møldrup, M. E., Simonsen, H. T. & Hamberger, B. R., 2014, Plant isoprenoids: methods and protocols. Rodríguez-Concepción, M. (ed.). Springer, Vol. 4. p. 245-255 11 p. (Methods in Molecular Biology, Vol. 1153).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  97. Published

    Differential gene transcript accumulation in peas in response to powdery mildew (Erysiphe pisi) attack

    Barilli, E., Rubiales, D., Gjetting, T. & Lyngkjær, M. F., 2014, In: Euphytica. 198, 1, p. 13-28 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Shedding light on protein folding, structural and functional dynamics by single molecule studies

    Bavishi, K. & Hatzakis, Nikos, 2014, In: Molecules. 19, 12, p. 19407-19434 28 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Acylated glucosinolates with diverse acyl groups investigated by high resolution mass spectrometry and infrared multiphoton dissociation

    Bianco, G., Agerbirk, Niels, Losito, I. & Cataldi, T. R. I., 2014, In: Phytochemistry. 100, p. 92-102 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Mass spectrometry imaging of plant metabolites – principles and possibilities

    Bjarnholt, Nanna, Li, B., D'Alvise, J. & Janfelt, Christian, 2014, In: Natural Product Reports. 31, 6, p. 818-837 20 p.

    Research output: Contribution to journal › Review › Research › peer-review

  101. Published

    Characterization of two genes for the biosynthesis of abietane-type diterpenes in rosemary (Rosmarinus officinalis) glandular trichomes

    Brückner, K., Božić, D., Manzano, D., Papaefthimiou, D., Pateraki, Irini, Scheler, U., Ferrer, A., de Vos, R. C. H., Kanellis, A. K. & Tissier, A., 2014, In: Phytochemistry. 101, p. 52-64 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  102. Published

    COP1 E3 ligase protects HYL1 to retain microRNA biogenesis

    Cho, S. K., Ben Chaabane, S., Shah, P., Poulsen, C. P. & Yang, S. W., 2014, In: Nature Communications. 5, 10 p., 5867.

    Research output: Contribution to journal › Journal article › Research › peer-review

  103. Published

    Different geographical distributions of two chemotypes of Barbera vulgaris that differ in resistance to insects and a pathogen

    Christensen, S., Heimes, C., Agerbirk, Niels, Poulsen, V. K., Olsen, C. E. & Hauser, T. P., 2014, In: Journal of Chemical Ecology. 40, 5, p. 491-501 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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