Section for Plant Biochemistry

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  1. Published

    Engineering of CYP76AH15 can improve activity and specificity towards forskolin biosynthesis in yeast

    Forman, Victor, Jensen, N. B., Dyekjær, J. D., Møller, Birger Lindberg & Pateraki, Irini, 2018, In: Microbial Cell Factories. 17, p. 1-17 181.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    A gene cluster in Ginkgo biloba encodes unique multifunctional cytochrome P450s that initiate ginkgolide biosynthesis

    Forman, Victor, Luo, Dan, Geu-Flores, Fernando, Lemcke, René, Nelson, D., Kampranis, Sotirios, Stærk, Dan, Møller, Birger Lindberg & Pateraki, Irini, 2022, In: Nature Communications. 13, 14 p., 5143.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    A Genome-Wide Identification and Comparative Analysis of the Heavy-Metal-Associated Gene Family in Cucurbitaceae Species and Their Role in Cucurbita pepo under Arsenic Stress

    Flores-Iga, G., Lopez-Ortiz, C., Gracia-Rodriguez, C., Almeida, A., Nimmakayala, P., Reddy, U. K. & Balagurusamy, N., 2023, In: Genes. 14, 10, 19 p., 1877.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    The P450 genes of the cat flea, Ctenocephalides felis: a CYPome in flux

    Feyereisen, R., 2022, In: Current Research in Insect Science. 2, 7 p., 100032.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Origin and evolution of the CYP4G subfamily in insects, cytochrome P450 enzymes involved in cuticular hydrocarbon synthesis

    Feyereisen, R., 2020, In: Molecular Phylogenetics and Evolution. 143, 15 p., 106695.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Toxicology: bee P450s take the sting out of cyanoamidine neonicotinoids

    Feyereisen, R., 2018, In: Current Biology. 28, 9, p. R560-R562 3 p.

    Research output: Contribution to journal › Editorial › Research › peer-review

  7. Published

    A synbio approach for selection of highly expressed gene variants in Gram-positive bacteria

    Ferro, R., Rennig, M., Hernandez-Rollán, C., Daley, D. O. & Nørholm, M. H. H., 2018, In: Microbial Cell Factories. 17, 11 p., 37.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Protein Production Strategies for Gram-Positive Bacteria: An Approach for Cell Factories Optimization

    Ferro, R., 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  9. Published

    Transgenic Kalanchoë blossfeldiana, Containing Individual rol Genes and Open Reading Frames Under 35S Promoter, Exhibit Compact Habit, Reduced Plant Growth, and Altered Ethylene Tolerance in Flowers

    Favero, Bruno Trevenzoli, Tan, Y., Lin, Y., Hansen, H. B., Shadmani, N., Xu, J., He, Junou, Müller, Renate, Almeida, A. & Lütken, Henrik Vlk, 2021, In: Frontiers in Plant Science. 12, 20 p., 672023.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Eco-Evo-Devo of petal pigmentation patterning

    Fairnie, A. L. M., Yeo, M. T. S., Gatti, S., Chan, E., Travaglia, V., Walker, J. F. & Moyroud, E., 2022, In: Essays in Biochemistry. 66, 6, p. 753-768 16 p.

    Research output: Contribution to journal › Review › Research › peer-review

  11. Published

    The application of the CRISPR-Cas9 genome editing machinery in food and agricultural science: Current status, future perspectives, and associated challenges

    Eş, I., Gavahian, M., Marti-Quijal, F. J., Lorenzo, J. M., Mousavi Khaneghah, A., Tsatsanis, C., Kampranis, Sotirios & Barba, F. J., 1 May 2019, In: Biotechnology Advances. 37, 3, p. 410-421 12 p.

    Research output: Contribution to journal › Review › Research › peer-review

  12. Published

    Triterpenoid Saponin Biosynthesis in the non-model Crucifer Plant Barbares Vulgaris: Gene Discovery Genome Assembly, and Tranformation

    Erthmann, P. Ø., 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  13. Published

    A tandem array of UDP-glycosyltransferases from the UGT73C subfamily glycosylate sapogenins, forming a spectrum of mono- and bisdesmosidic saponins

    Erthmann, P. Ø., Agerbirk, Niels & Bak, Søren, 2018, In: Plant Molecular Biology. 97, 1-2, p. 37-55 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Global medicinal uses of Euphorbia L. (Euphorbiaceae)

    Ernst, M., Grace, O. M., Saslis Lagoudakis, H., Nilsson, N., Simonsen, H. T. & Rønsted, Nina, 2015, In: Journal of Ethnopharmacology. 176, p. 90-101 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    The saponin bomb

    Erffelinck, M., Mertens, J., Lacchini, E., Molina-Hidalgo, F. J., Tzfadia, O., Cárdenas, Pablo D., Pollier, J., Tava, A., Bak, Søren & Goossens, A., 2022, Research Square, 33 p.

    Research output: Working paper › Preprint

  16. Published

    Metabolic engineering of Synechocystis sp. PCC 6803 for production of the plant diterpenoid manoyl oxide

    Englund, E., Andersen-Ranberg, Johan, Miao, R., Hamberger, B. R. & Lindberg, P., 2015, In: A C S Synthetic Biology. 4, 12, p. 1270-1278 9 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  17. Published

    Deletion of biosynthetic genes, specific SNP patterns and differences in transcript accumulation cause variation in hydroxynitrile glucoside content in barley cultivars

    Ehlert, M., Jagd, L. M., Braumann, I., Dockter, C., Crocoll, C., Motawie, Mohammed Saddik, Møller, Birger Lindberg & Lyngkjær, M. F., 5 Apr 2019, In: Scientific Reports. 9, p. 1-10 5730.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Investigation of regulation and transport of barley hydroxynitrile glucosides

    Ehlert, M., 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  19. Published

    Control of flowering in rice through synthetic microProteins

    qmd783, qmd783, Ariza, J. G., Brambilla, V., Sun, B., Bhati, K. K., Fornara, F. & Wenkel, Stephan, 2020, In: Journal of Integrative Plant Biology. 62, 6, p. 730-736

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    MicroProteins: small size - big impact

    qmd783, qmd783, Straub, D., Graeff, M. & Wenkel, Stephan, 2015, In: Trends in Plant Science. 20, 8, p. 477–482 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    The Three Members of the Arabidopsis Glycosyltransferase Family 92 are Functional β-1,4-Galactan Synthases

    Ebert, B., Birdseye, D., Liwanag, A. J. M., Laursen, Tomas, Rennie, E. A., Guo, X., Catena, M., Rautengarten, C., Stonebloom, S. H., Gluza, P., Pidatala, V., Andersen, M. C. F., Cheetamun, R., Mortimer, J. C., Heazlewood, J. L., Bacic, A., Clausen, M. H., Willats, W. G. T. & Scheller, H. V., 2018, In: Plant and Cell Physiology. 59, 12, p. 2624-2636 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Transforming yeast peroxisomes into microfactories for the efficient production of high-value isoprenoids

    hmq634, hmq634, Wajn, William Thomas, Liu, Y., Ignea, C. & Kampranis, Sotirios, 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 50, p. 31789-31799 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Spatial analysis of root hemiparasitic shrubs and their hosts: a search for spatial signatures of above- and below-ground interactions [incl. Erratum]

    Dueholm, B., Bruce, D., Weinstein, P., Semple, S., Møller, Birger Lindberg & Weiner, Jacob, 2017, In: Plant Ecology. 218, 2, p. 185-196 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Evolution of substrate recognition sites (SRSs) in cytochromes P450 from Apiaceae exemplified by the CYP71AJ subfamily

    Dueholm, B., Krieger, C., Drew, D. P., Olry, A., Kamo, T., Taboureau, O., Weitzel, C., Bourgaud, F., Hehn, A. & Simonsen, H. T., 2015, In: BMC Evolutionary Biology. 15, 14 p., 122.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    BacHBerry: BACterial hosts for production of bioactive phenolics from bERRY fruits

    Dudnik, A., Almeida, A. F., Andrade, R., Avila, B., Bañados, P., Barbay, D., Bassard, J-É. A., Benkoulouche, M., Bott, M., Braga, A., Breitel, D., Brennan, R., Bulteau, L., Chanforan, C., Costa, I., Costa, R. S., Doostmohammadi, M., Faria, N., Feng, C., Fernandes, A. & 30 others, Ferreira, P., Ferro, R., Foito, A., Freitag, S., Garcia, G., Gaspar, P., Godinho-Pereira, J., Hamberger, B. R., Hartmann, A., Heider, H., Jardim, C., Julien-Laferriere, A., Kallscheuer, N., Kerbe, W., Kuipers, O. P., Li, S., Love, N., Marchetti-Spaccamela, A., Marienhagen, J., Martin, C., Mary, A., Mazurek, V., Meinhart, C., Sevillano, D. M., Menezes, R., Naesby, M., Nørholm, M. H. H., Okkels, F. T., Stahlhut, S. G. & Vogt, M., 2018, In: Phytochemistry Reviews. 17, 2, p. 291-326 36 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Widespread biosynthesis of 16-carbon terpenoids in bacteria

    Duan, Yaotao, Koutsaviti, A., Harizani, M., Ignea, C., Roussis, V., Zhao, Yong, Ioannou, E. & Kampranis, Sotirios, 2023, In: Nature Chemical Biology. 19, p. 1532-1539

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Involvement of cytochrome P450 in oxime production in glucosinolate biosynthesis as demonstrated by an in vitro microsomal enzyme system isolated from jasmonic acid-induced seedlings of Sinapis alba L.

    Du, L., Lykkesfeldt, Jens, Olsen, C. E. & Halkier, Barbara Ann, 19 Dec 1995, In: Proceedings of the National Academy of Sciences of the United States of America. 92, 26, p. 12505-12509 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    The biosynthesis of cyanogenic glucosides in roots of cassava

    Du, L., Bokanga, M., Møller, Birger Lindberg & Halkier, Barbara Ann, May 1995, In: Phytochemistry. 39, 2, p. 323-326 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Two key polymorphisms in a newly discovered allele of the Vitis vinifera TPS24 gene are responsible for the production of the rotundone precursor α-guaiene

    Drew, D. P., Andersen, T. B., Sweetman, C., Møller, Birger Lindberg, Ford, C. & Simonsen, H. T., 2016, In: Journal of Experimental Botany. 67, 3, p. 799-808 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Transcriptome analysis of Thapsia laciniata rouy provides insights into terpenoid biosynthesis and diversity in apiaceae

    Drew, D. P., Dueholm, B., Weitzel, C., Zhang, Y., Sensen, C. W. & Simonsen, H. T., 2013, In: International Journal of Molecular Sciences (Online). 14, 5, p. 9080-9098 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Co-expression of squalene epoxidases with triterpene cyclases boosts production of triterpenoids in plants and yeast

    Dong, L., Pollier, J., Bassard, J., Ntallas, G., Almeida, A., Lazaridi, E., Khakimov, Bekzod, Arendt, P., de Oliveira, L. S., Lota, F., Goossens, A., Michoux, F. & Bak, Søren, 2018, In: Metabolic Engineering. 49, p. 1-12

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    An independent evolutionary origin for insect deterrent cucurbitacins in Iberis amara

    Dong, L., Almeida Robles, A. R., Pollier, J., Khakimov, Bekzod, Bassard, J. A., Miettinen, K., Stærk, Dan, Mehran, R., Olsen, C. E., Motawie, Mohammed Saddik, Goossens, A. & Bak, Søren, 2021, In: Molecular Biology and Evolution. 38, 11, p. 4659-4673 15 p., msab213.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Deciphering dynamic dose responses of natural promoters and single cis elements upon osmotic and oxidative stress in yeast

    Dolz-Edo, L., Rienzo, A., Poveda Huertes, Daniel, Pascual-Ahuir, A. & Proft, M., Jun 2013, In: Molecular and Cellular Biology. 33, 11, p. 2228-40 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Role of microProteins in controlling diverse biological pathways

    Dolde, U. M., 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  35. Published

    Synthetic microproteins: versatile tools for posttranslational regulation of target proteins

    Dolde, U. M., Rodrigues, V. L., Straub, D., Bhati, K. K., Choi, S., Yang, S. W. & Wenkel, Stephan, 2018, In: Plant Physiology. 176, 4, p. 3136-3145 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Chemo- and regioselective functionalization of nortrilobolide: application for semi-synthesis of the natural product 2-acetoxytrilobolide

    Doan, T. Q. N., Crestey, F., Olsen, C. E. & Christensen, Søren Brøgger, 2015, In: Journal of Natural Products. 78, 6, p. 1406-1414

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Expression of Bax in yeast affects not only the mitochondria but also vacuolar integrity and intracellular protein traffic

    Dimitrova, I., Toby, G. G., Tili, E., Strich, R., Kampranis, Sotirios & Makris, A. M., 21 May 2004, In: FEBS Letters. 566, 1-3, p. 100-4 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Galactosyltransferases from Arabidopsis thaliana in the biosynthesis of type II arabinogalactan: molecular interaction enhances enzyme activity

    Dilokpimol, A., Poulsen, C. P., Vereb, G., Kaneko, S., Schulz, Alexander & Geshi, N., 2014, In: B M C Plant Biology. 14, 14 p., 90.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Does host plant adaptation lead to pesticide resistance in generalist herbivores?

    Dermauw, W., Pym, A., Bass, C., Van Leeuwen, T. & Feyereisen, R., 2018, In: Current Opinion in Insect Science. 26, p. 25-33

    Research output: Contribution to journal › Review › Research › peer-review

  40. Published

    Diversity and evolution of the P450 family in arthropods

    Dermauw, W., Van Leeuwen, T. & Feyereisen, R., 2020, In: Insect Biochemistry and Molecular Biology. 127, 22 p., 103490.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Structure-guided engineering of key amino acids in UGT85B1 controlling substrate and stereo-specificity in aromatic cyanogenic glucoside biosynthesis

    Del Giudice, R., Putkaradze, N., dos Santos, B. M., Hansen, Cecilie Ida Cetti, Crocoll, C., Motawie, Mohammed Saddik, Fredslund, F., Laursen, Tomas & Welner, D. H., 2022, In: Plant Journal. 111, 6, p. 1539-1549

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Cyanogenic glucosides and derivatives in almond and sweet cherry flower buds from dormancy to flowering

    Del Cueto, J., Ionescu, I. A., Picmanova, M., Gericke, Oliver, Motawia, M. S., Olsen, C. E., Campoy, J. A., Dicenta, F., Møller, Birger Lindberg & Sánchez Pérez, R., 2017, In: Frontiers in Plant Science. 8, 16 p., 800.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    β-Glucosidase activity in almond seeds

    Del Cueto, J., Møller, Birger Lindberg, Dicenta, F. & Sánchez Pérez, R., 2018, In: Plant Physiology and Biochemistry. 126, p. 163-172

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Identification of Structural Elements of the Lysine Specific Demethylase 2B CxxC Domain Associated with Replicative Senescence Bypass in Primary Mouse Cells

    Deiktakis, E. E., Abrams, M., Tsapara, A., Stournaras, C., Tsatsanis, C., Tsichlis, P. N. & Kampranis, Sotirios, 2020, In: Protein Journal. 39, 3, p. 232-239 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Roadmap for Accelerated Domestication of an Emerging Perennial Grain Crop

    DeHaan, L., Larson, S., Lopez Marques, Rosa Laura, Wenkel, Stephan, Gao, C. & Palmgren, Michael, 2020, In: Trends in Plant Science. 25, 6, p. 525-537 13 p.

    Research output: Contribution to journal › Review › Research › peer-review

  46. Published

    Phenotypic plasticity in chemical defence of butterflies allows usage of diverse host plants

    De Castro, É. C. P., Musgrove, J., Bak, Søren, McMillan, W. O. & Jiggins, C. D., 2021, In: Biology Letters. 17, 3, 6 p., 20200863.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    How does garlic mustard lure and kill the west virginia white butterfly?

    Davis, S. L., Frisch, T., Bjarnholt, Nanna & Cipollini, D., 2015, In: Journal of Chemical Ecology. 41, 10, p. 948-955 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Disulfides from the Brown Alga Dictyopteris membranacea Suppress M1 Macrophage Activation by Inducing AKT and Suppressing MAPK/ERK Signaling Pathways

    Daskalaki, M. G., Bafiti, P., Kikionis, S., Laskou, M., Roussis, V., Ioannou, E., Kampranis, Sotirios & Tsatsanis, C., 2020, In: Marine Drugs. 18, 11, 14 p., 527.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Reproducibility and reliability assays of the gene expression-measurements

    Darbani Shirvanehdeh, B. & Stewart, Jr., C. N., 2014, In: Journal of Biological Research-Thessaloniki. 21, 3

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Correction of gene expression data: performance-dependency on inter-replicate and inter-treatment biases

    Darbani Shirvanehdeh, B., Stewart, C. N. J., Noeparvar, S. & Borg, S., 2014, In: Journal of Biotechnology. 188, p. 100-109 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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