Section for Plant Biochemistry

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  1. Published

    Concerted interplay of chloroplast and nuclear genes in the formation of the photosynthetic apparatus

    Wettstein, D. V., Poulsen, C., Oliver, R., Gough, S., Kannangara, G., Møller, Birger Lindberg & Simpson, D., 1983, Genetics: New Frontiers: Oxford and IBH Publishing. New Delhi, p. 267-285 19 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  2. Published

    Polypeptides associated with photosystem II

    Wettstein, D. V., Møller, Birger Lindberg, Koenig, F., Henry, L. & Høyer-Hansen, G., 1982, Photochemical, Photoelectrochemical and Photobiological Processes. Hall, DO. & Palz, W. (eds.). Dordrecht: D. Reidel Publishing Company, Vol. 1. p. 118-124 7 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  3. Published

    Cytochrome P450-enzymes involved in the biosynthesis of mono- and sesquiterpenes

    Weitzel, C. & Simonsen, H. T., 2015, In: Phytochemistry Reviews. 14, 1, p. 7-24 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Resurrecting deadly carrots. towards a revision of Thapsia (Apiaceae) based on phylogenetic analysis of nrITS sequences and chemical profiles

    Weitzel, C., Rønsted, Nina, Spalik, K. & Simonsen, H. T., 2014, In: Botanical Journal of the Linnean Society. 174, 4, p. 620-636 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Structure of SALL4 zinc finger domain reveals link between AT-rich DNA binding and Okihiro syndrome

    Watson, J. A., Pantier, R., Jayachandran, U., Chhatbar, K., Alexander-Howden, B., Kruusvee, Valdeko, Prendecki, M., Bird, A. & Cook, A. G., 2023, In: Life Science Alliance. 6, 3, 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Cassava genome from a wild ancestor to cultivated varieties

    Wang, W., Feng, B., Xiao, J., Xia, Z., Zhou, X., Li, P., Zhang, W., Wang, Y., Møller, B. L., Zhang, P., Luo, M-C., Xiao, G., Liu, J., Yang, J., Chen, S., Rabinowicz, P. D., Chen, X., Zhang, H-B., Ceballos, H., Lou, Q. & 60 others, Zou, M., Carvalho, L. J. C. B., Zeng, C., Xia, J., Sun, S., Fu, Y., Wang, H., Lu, C., Ruan, M., Zhou, S., Wu, Z., Liu, H., Kannangara, R. M., Jørgensen, Kirsten, Neale, R. L., Bonde, M., Heinz, Nanna, Zhu, W., Wang, S., Zhang, Y., Pan, K., Wen, M., Ma, P., Li, Z., Hu, M., Liao, W., Hu, W., Zhang, S., Pei, J., Guo, A., Guo, J., Zhang, J., Zhang, Z., Ye, J., Ou, W., Ma, Y., Liu, X., Tallon, L. J., Galens, K., Ott, S., Huang, J., Xue, J., An, F., Yao, Q., Lu, X., Fregene, M., Augusto Becerra Lopez-Lavalle, L., Wu, J., You, F. M., Chen, M., Hu, S., Wu, G., Zhong, S., Ling, P., Chen, Y., Wang, Q., Liu, G., Liu, B., Li, K. & Peng, M., 2014, In: Nature Communications. 5, 5110.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Whole-cell biocatalytic synthesis of terpenoids bypasses the isoprene rule

    Wang, Lina, 2024, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 132 p.

    Research output: Book/Report › Ph.D. thesis › Research

  8. Published

    CYP6AE gene cluster knockout in Helicoverpa armigera reveals role in detoxification of phytochemicals and insecticides

    Wang, H., Shi, Y., Wang, L., Liu, S., Wu, S., Yang, Y., Feyereisen, R. & Wu, Y., 2018, In: Nature Communications. 9, p. 1-8 4820.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Engineering and optimization of the 2-phenylethylglucosinolate production in Nicotiana benthamiana by combining biosynthetic genes from Barbarea vulgaris and Arabidopsis thaliana

    Wang, Cuiwei, Crocoll, C., Agerbirk, Niels & Halkier, Barbara Ann, 2021, In: Plant Journal. 106, 4, p. 978-992

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Characterization of Arabidopsis CYP79C1 and CYP79C2 by Glucosinolate Pathway Engineering in Nicotiana benthamiana Shows Substrate Specificity Toward a Range of Aliphatic and Aromatic Amino Acids

    Wang, Cuiwei, Dissing, M. M., Agerbirk, Niels, Crocoll, C. & Halkier, Barbara Ann, 2020, In: Frontiers in Plant Science. 11, 13 p., 57.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Genomics of ammonia-oxidizing bacteria and denitrification in wastewater treatment plants

    Vélez-Mercado, M. I., Piña-Arroyo, B. A., Espinoza-Lavenant, C. A., Sosa-Herrera, A., Ramirez-Ramirez, E., Almeida, A., Luévanos-Escareño, M. P., Hernández-Almanza, A. Y., Hernández-Beltran, J. U., Balagurusamy, N. & Aguilar-González, C. N., 2022, Development in Wastewater Treatment Research and Processes: Microbial Ecology, Diversity and Functions of Ammonia Oxidizing Bacteria. Elsevier, p. 237-256

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  12. Published

    An improved Nicotiana benthamiana bioproduction chassis provides novel insights into nicotine biosynthesis

    Vollheyde, K., Dudley, Q. M., Yang, T., Oz, M. T., Mancinotti, Davide, Fedi, M. O., Heavens, D., Linsmith, G., Chhetry, M., Smedley, M. A., Harwood, W. A., Swarbreck, D., Geu-Flores, Fernando & Patron, N. J., 2023, In: New Phytologist. 240, 1, p. 302-317 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Reduced proinsecticide activation by cytochrome P450 confers coumaphos resistance in the major bee parasite Varroa destructor

    Vlogiannitis, S., Mavridis, K., Dermauw, W., Snoeck, S., Katsavou, E., Morou, E., Harizanis, P., Swevers, L., Hemingway, J., Feyereisen, R., van Leeuwen, T. & Vontas, J., 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 6, e2020380118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. E-pub ahead of print

    ABI5 binding proteins: key players in coordinating plant growth and development

    Vittozzi, Y., Krüger, T., Majee, A., Née, G. & Wenkel, Stephan, 2024, (E-pub ahead of print) In: Trends in Plant Science.

    Research output: Contribution to journal › Review › Research › peer-review

  15. Published

    Development of a fluorescence-based assay for functional studies of transporter proteins on the single molecule level

    Veshaguri, S., Christensen, S. F., Møller, M. P., Ghale, G., Lohr, C., Christensen, A. L., Tutkus, M., Kemmer, G. C., Jørgensen, I. L., Justesen, B. H., Curran, P., Pomorski, Thomas Guenther, Mindell, J. & Stamou, Dimitrios, 2015, In: Biophysical Journal. 108, 2, Supplement 1, p. 187a 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  16. Published

    An expression tag toolbox for microbial production of membrane bound plant cytochromes P450

    Vazquez-Albacete, D., Cavaleiro, A. M., Christensen, U., Seppälä, S., Møller, Birger Lindberg & Nørholm, M. H. H., 2017, In: Biotechnology and Bioengineering. 114, 4, p. 751-760 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    The CYP79A1 catalyzed conversion of tyrosine to (E)-p-hydroxyphenylacetaldoxime unravelled using an improved method for homology modeling

    Vazquez Albacete, D., Montefiori, M., Kol, S., Motawie, Mohammed Saddik, Møller, Birger Lindberg, Olsen, L. & Nørholm, M. H. H., 2017, In: Phytochemistry. 135, p. 8-17 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Immunoaffinity purification using monoclonal antibodies for the isolation of indole auxins from elongation zones of epicotyls of red-light-grown Alaska peas

    Ulvskov, Peter, Marcussen, J., Seiden, P. & Olsen, C. E., Sep 1992, In: Planta. 188, 2, p. 182-189 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    New genes on the block: Neofunctionalization of tandem duplicate genes with putative new functions in Arabidopsis

    Ugalde, J. M. & Straube, Henryk, 2023, In: Plant Physiology. 192, 4, p. 2574-2576 3 p., 271.

    Research output: Contribution to journal › Editorial › Research › peer-review

  20. E-pub ahead of print

    Site-directed genotype screening for elimination of antinutritional saponins in quinoa seeds identifies TSARL1 as a master controller of saponin biosynthesis selectively in seeds

    Trinh, Mai Duy Luu, Visintainer, Davide, Günther, Jan, Østerberg, J. T., Rodrigues da Fonseca, Rute Andreia, Fondevilla, S., Moog, Max William, Luo, Guangbin, Nørrevang, Anton Frisgaard, Crocoll, C., Nielsen, P. V., Jacobsen, S., Wendt, T., Bak, Søren, Lopez Marques, Rosa Laura & Palmgren, Michael, 2024, (E-pub ahead of print) In: Plant Biotechnology Journal. 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Imine chemistry in plant metabolism

    Torrens-Spence, M. P., Glinkerman, C. M., Günther, Jan & Weng, J., 2021, In: Current Opinion in Plant Biology. 60, 101999.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Photoinhibitory damage of barley photosystem I at chilling temperatures induced under controlled illumination is also identified in the field

    Tjus, S. E., Teicher, H. B. & Møller, Birger Lindberg, 1998, Photosynthesis: Mechanisms and Effects. Garab, G. (ed.). Kluwer Academic Publishers, Vol. I-V. p. 2221-2224 4 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  23. Published

    RNA-seq, de novo transcriptome assembly and flavonoid gene analysis in 13 wild and cultivated berry fruit species with high content of phenolics

    Thole, V., Bassard, J. E., Ramírez-González, R., Trick, M., Ghasemi Afshar, B., Breitel, D., Hill, L., Foito, A., Shepherd, L., Freitag, S., Nunes Dos Santos, C., Menezes, R., Banãdos, P., Naesby, M., Wang, L., Sorokin, A., Tikhonova, O., Shelenga, T., Stewart, D., Vain, P. & 1 others, Martin, C., 19 Dec 2019, In: BMC Genomics. 20, p. 1-23 995.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Hunting for Ancestral Genes - Elucidating Metabolic Pathways in Ferns

    Thodberg, S., 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  25. Published

    Elucidation of the Amygdalin Pathway Reveals the Metabolic Basis of Bitter and Sweet Almonds (Prunus dulcis)

    Thodberg, S., Del Cueto, J., Mazzeo, R., Pavan, S., Lotti, C., Dicenta, F., Neilson, Elizabeth Heather Jakobsen, Møller, Birger Lindberg & Sánchez Pérez, R., 2018, In: Plant Physiology. 178, 3, p. 1096-1111 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    The fern CYPome: Fern-specific cytochrome P450 family involved in convergent evolution of chemical defence

    Thodberg, S., Hansen, C. C., Takos, A. M., Pičmanová, M., Møller, Birger Lindberg, Nelson, D. & Neilson, Elizabeth Heather Jakobsen, 2021, 27 p. (bioRxiv).

    Research output: Working paper › Preprint › Research

  27. Published

    The “Green” FMOs: Diversity, Functionality and Application of Plant Flavoproteins

    Thodberg, S. & Neilson, Elizabeth Heather Jakobsen, 2020, In: Catalysts. 10, 3, 21 p., 329.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    A flavin-dependent monooxygenase catalyzes the initial step in cyanogenic glycoside synthesis in ferns

    Thodberg, S., Sørensen, Mette, Bellucci, M., Crocoll, C., Bendtsen, Amalie Kofoed, Nelson, D. R., Motawie, Mohammed Saddik, Møller, Birger Lindberg & Neilson, Elizabeth Heather Jakobsen, 2020, In: Communications Biology . 3, 11 p., 507.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Optimized expression of a wheat obtusifoliol 14α-demethylase(CYP51) in yeast

    Taton, M., Cabello-Hurtado, F., Zimmerlin, A., Bak, Søren, Kahn, R., Angelo, P., Durst, F., Rahier, A. & Werck-Reichhart, D., 1997, In: FASEB Journal. 11, 9, p. A812

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    High throughput screening of starch structures using carbohydrate microarrays

    Tanackovic, V., Rydahl, M. G., Pedersen, H. L., Motawie, Mohammed Saddik, Shaik, S. S., Mikkelsen, M. D., Jensen, S. L., Fangel, J. U., Willats, W. G. T. & Blennow, Andreas, 2016, In: Scientific Reports. 6, 9 p., 30551.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Secondary Metabolites with Anti-Inflammatory Activity from Laurencia majuscula Collected in the Red Sea

    Tammam, M. A., Daskalaki, M. G. G., Tsoureas, N., Kolliniati, O., Mahdy, A., Kampranis, Sotirios, Tsatsanis, C., Roussis, V. & Ioannou, E., 2023, In: Marine Drugs. 21, 2, 15 p., 79.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    The Arabidopsis NPF3 protein is a GA transporter

    Tal, I., Zhang, Y., Jørgensen, M. E., Pisanty, O., Barbosa, I. C. R., Zourelidou, M., Regnault, T., Crocoll, C., Olsen, C. E., Weinstain, R., Schwechheimer, C., Halkier, Barbara Ann, Nour-Eldin, Hussam Hassan, Estelle, M. & Shani, E., 2016, In: Nature Communications. 7, 20 p., 11486.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Plant-specialized metabolism and its genomic organization in biosynthetic gene clusters in Lotus japonicus

    Takos, A. M. & Rook, F., 2014, The Lotus japonicus genome. Tabata, S. & Stougaard, J. (eds.). Springer, p. 149-162 14 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  34. Published

    Towards a molecular understanding of the biosynthesis of amaryllidaceae alkaloids in support of their expanding medical use

    Takos, A. M. & Rook, F., 2013, In: International Journal of Molecular Sciences (Online). 14, 6, p. 11713-11741 29 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    High-resolution PTP1B inhibition profiling combined with high-performance liquid chromatography - high-resolution mass spectrometry - solid-phase extraction - nuclear magnetic resonance spectroscopy: Proof-of-concept and antidiabetic constituents in crude extract of Eremophila lucida

    Tahtah, Y., Wubshet, S. G., Kongstad, Kenneth Thermann, Heskes, A. M., Pateraki, Irini, Møller, Birger Lindberg, Jäger, A. & Stærk, Dan, 2016, In: Fitoterapia. 110, p. 52-58 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Oximes: unrecognized chameleons in general and specialized plant metabolism

    Sørensen, Mette, Neilson, Elizabeth Heather Jakobsen & Møller, Birger Lindberg, 2018, In: Molecular Plant. 11, 1, p. 95-117 23 p.

    Research output: Contribution to journal › Review › Research › peer-review

  37. Published

    The Role and Plasticity of Plant Metabolism

    Sørensen, Mette, 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  38. Published

    The entangled dynamics of eucalypt leaf and flower volatile emissions

    Sørensen, Mette, Rinnan, Riikka, Woodrow, I., Møller, Birger Lindberg & Neilson, Elizabeth Heather Jakobsen, 2020, In: Environmental and Experimental Botany. 176, 14 p., 104032.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Circular biomanufacturing through harvesting solar energy and CO2

    Sørensen, Mette, Andersen-Ranberg, Johan, Hankamer, B. & Møller, Birger Lindberg, 2022, In: Trends in Plant Science. 27, 7, p. 655-673 19 p.

    Research output: Contribution to journal › Review › Research › peer-review

  40. Published

    Metabolic Engineering of Photosynthetic Cells: in Collaboration with Nature

    Sørensen, Mette & Møller, Birger Lindberg, 2021, Metabolic Engineering: Concepts and Applications. Lee, S. Y., Stephanopoulos, G. & Nielsen, J. (eds.). Wiley, Vol. 13a. p. 803-857 55 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  41. Published

    Mutation of a bHLH transcription factor allowed almond domestication

    Sánchez-Pérez, R., Pavan, S., Mazzeo, R., Moldovan, C., Aiese Cigliano, R., Del Cueto, J., Ricciardi, F., Lotti, C., Ricciardi, L., Dicenta, F., Lopez Marques, Rosa Laura & Møller, Birger Lindberg, 14 Jun 2019, In: Science. 364, 6445, p. 1095-1098

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Analysis of wild tomato introgression lines elucidates the genetic basis of transcriptome and metabolome variation underlying fruit traits and pathogen response

    Szymanski, J., Bocobza, S., Panda, S., Sonawane, P., Cárdenas, Pablo D., Lashbrooke, J., Kamble, A., Shahaf, N., Meir, S., Bovy, A., Beekwilder, J., Tikunov, Y., Romero de la Fuente, I., Zamir, D., Rogachev, I. & Aharoni, A., 2020, In: Nature Genetics. 52, p. 1111-1121

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Stivelse til alle formål

    Svarre, M., Young, N., Muhrbeck, P., Møller, Birger Lindberg & Marcussen, J., 1997, In: Levnedsmiddelbladet. 35, p. 18-19 2 p.

    Research output: Contribution to journal › Journal article › Communication

  44. Published

    Identification and characterization of biosynthetic components involved in Vitex agnus-castus diterpenes biosynthesis

    Sundram, T. C. M., 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  45. Published

    FIONA1-mediated methylation of the 3'UTR of FLC affects FLC transcript levels and flowering in Arabidopsis

    Sun, B., Bhati, K. K., Song, P., Edwards, Ashleigh Katrina, Petri, Louise, Kruusvee, Valdeko, Blaakmeer, A., Dolde, U., Rodrigues, V., Straub, D., Yang, J., Jia, G. & Wenkel, Stephan, 2022, In: PLOS Genetics. 18, 9, 22 p., e1010386.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Arabidopsis Tóxicos en Levadura 78 (AtATL78) mediates ABA-dependent ROS signaling in response to drought stress

    Suh, J. Y., Kim, S. J., Oh, T. R., Cho, S. K., Yang, S. W. & Kim, W. T., 2016, In: Biochemical and Biophysical Research Communications. 469, 1, p. 8-14 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Am-aza-ing antidiabetic: Mulberry dehydrogenase MnGUTB1 contributes to the biosynthesis of 1-deoxynojirimycin

    Straube, Henryk, 2023, In: Plant Physiology. 192, 2, p. 700-702 3 p.

    Research output: Contribution to journal › Editorial › Research › peer-review

  48. Published

    Peeling back the layers: Unveiling the biochemistry of health-promoting molecules in orange fruits

    Straube, Henryk, 2023, In: Plant Physiology. 192, 4, 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Rooted in chemistry: 2 secoiridoid glucosides promoting fungal symbiosis

    Straube, Henryk, 2023, In: Plant Physiology. 193, 4, p. 2257-2259

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    A glycoside-specific glycosyltransferase transfers apiose to flavonoid glucosides in celery

    Straube, Henryk, 2023, In: Plant Physiology. 193, 3, p. 1715-1717 3 p.

    Research output: Contribution to journal › Comment/debate › Research

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