Section for Plant Biochemistry

  1. 2013
  2. Published

    The barley HvNAC6 transcription factor affects ABA accumulation and promotes basal resistance against powdery mildew

    Chen, Yan-Jun, Perera, V., Christiansen, M. W., Holme, I., Gregersen, P. L., Grant, M. R., Collinge, David B. & Lyngkjær, M. F., 2013, In: Plant Molecular Biology. 83, 6, p. 577-590 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Transcriptome analysis of Thapsia laciniata rouy provides insights into terpenoid biosynthesis and diversity in apiaceae

    Drew, D. P., Dueholm, B., Weitzel, C., Zhang, Y., Sensen, C. W. & Simonsen, H. T., 2013, In: International Journal of Molecular Sciences (Online). 14, 5, p. 9080-9098 19 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    The Complexity of Bioactive Natural Products in Plants: On the Co-occurrence of Hydroxynitrile Glucosides and Glucosinolates

    Frisch, T., 2013, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 149 p.

    Research output: Book/ReportPh.D. thesisResearch

  5. Published

    Plant defense against insect herbivores

    Fürstenberg-Hägg, J., Zagrobelny, Mika & Bak, Søren, 2013, In: International Journal of Molecular Sciences (Online). 14, 5, 56 p.

    Research output: Contribution to journalReviewResearchpeer-review

  6. Published

    Biochemical analysis of a multifunctional cytochrome P450 (CYP51) enzyme required for synthesis of antimicrobial triterpenes in plants

    Geisler, K., Hughes, R. K., Sainsbury, F., Lomonossoff, G. P., Rejzek, M., Fairhurst, S., Olsen, C. E., Motawie, Mohammed Saddik, Melton, R. E., Hemmings, A. M., Bak, Søren & Osbourn, A., 2013, In: Proceedings of the National Academy of Sciences of the United States of America. 110, 35, p. E3360-E3367 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Plant P450s as versatile drivers for evolution of species-specific chemical diversity

    Hamberger, B. R. & Bak, Søren, 2013, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 368, 1612, 16 p., 20120426.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Homage to professor Meinhart H. Zenk: Crowd accelerated research and innovation

    Heinz, Nanna & Møller, Birger Lindberg, 2013, In: Phytochemistry. 91, p. 20-28 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Identification of key amino acids for the evolution of promoter target specificity of anthocyanin and proanthocyanidin regulating MYB factors

    Heppel, S. C., Jaffé, F. W., Takos, A. M., Schellmann, S., Rausch, T., Walker, A. R. & Bogs, J., 2013, In: Plant Molecular Biology. 82, 4-5, p. 457-471 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Two aquaporins of Jatropha are regulated differentially during drought stress and subsequent recovery

    Jang, H., Yang, S. W., Carlson, J. E., Ku, Y. & Ahn, S., 2013, In: Journal of Plant Physiology. 170, 11, p. 1028-1038 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Isolation of monodisperse nanodisc-reconstituted membrane proteins using free flow electrophoresis

    Justesen, B. H., Laursen, Tomas, Weber, G., Fuglsang, Anja Thoe, Møller, Birger Lindberg & Pomorski, Thomas Guenther, 2013, In: Analytical Chemistry. 85, 7, p. 3497-3500 4 p.

    Research output: Contribution to journalLetterResearchpeer-review

  12. Published

    The use of trimethylsilyl cyanide derivatization for robust and broad-spectrum high-throughput gas chromatography–mass spectrometry based metabolomics

    Khakimov, Bekzod, Motawie, Mohammed Saddik, Bak, Søren & Engelsen, Søren Balling, 2013, In: Analytical and Bioanalytical Chemistry. 405, 28, p. 9193-9205 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    A β-glucuronosyltransferase from Arabidopsis thaliana involved in biosynthesis of type II arabinogalactan has a role in cell elongation during seedling growth

    Knoch, E., Dilokpimol, A., Tryfona, T., Poulsen, C. P., Xiong, G., Harholt, J., Petersen, Bent L, Ulvskov, Peter, Hadi, M. Z., Kotake, T., Tsumuraya, Y., Pauly, M., Dupree, P. & Geshi, N., 2013, In: Plant Journal. 76, 6, p. 1016-1029 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Characterization of Carbohydrate Active Enzymes Involved in Arabinogalactan Protein Metabolism

    Knoch, E., 2013, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 159 p.

    Research output: Book/ReportPh.D. thesisResearch

  15. Published

    Comparative genomics analysis in Prunoideae to identify biologically relevant polymorphisms

    Koepke, T., Schaeffer, S., Harper, A., Dicenta, F., Edwards, M., Henry, R. J., Møller, Birger Lindberg, Meisel, L., Oraguzie, N., Silva, H., Sanchez Perez, R. & Dhingra, A., 2013, In: Plant Biotechnology Journal. 11, 7, p. 883-893 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Bioengineering of photosystem I: light-­‐driven synthesis by a photosystem I - cytochrome P450 fusion

    Lassen, L. M. M., 2013, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 191 p.

    Research output: Book/ReportPh.D. thesisResearch

  17. Published

    Amphipol trapping of a functional CYP system

    Laursen, Tomas, Naur, P. & Møller, Birger Lindberg, 2013, In: Biotechnology and Applied Biochemistry. 60, 1, p. 119-127 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Visualizing metabolite distribution and enzymatic conversion in plant tissues by desorption electrospray ionization mass spectrometry imaging

    Li, B., Baden, C. K., Hansen, N. K. K., Jørgensen, Kirsten, Kannangara, R. M., Bak, Søren, Takos, A. M., Rook, F., Hansen, S. H., Møller, Birger Lindberg, Janfelt, Christian & Bjarnholt, Nanna, 2013, In: Plant Journal. 74, 6, p. 1059-1071 74.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    De novo genetic engineering of the camalexin biosynthetic pathway

    Møldrup, M. E., Salomonsen, B., Geu-Flores, Fernando, Olsen, C. E. & Halkier, Barbara Ann, 2013, In: Journal of Biotechnology. 167, 3, p. 296-301 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    Plant chemical defense: at what cost?

    Neilson, Elizabeth Heather Jakobsen, Goodger, J. Q. D., Woodrow, I. E. & Møller, Birger Lindberg, 2013, In: Trends in Plant Science. 18, 5, p. 250-258 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Redirecting photosynthetic reducing power toward bioactive natural product synthesis

    Nielsen, A. J. Z., Ziersen, B. E. F., Jensen, K., Lassen, L. M. M., Olsen, C. E., Møller, Birger Lindberg & Jensen, Poul Erik, 2013, In: A C S Synthetic Biology. 2, 6, p. 308-315 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Effects of PEG-induced osmotic stress on growth and dhurrin levels of forage sorghum

    O'Donnell, N. H., Møller, Birger Lindberg, Neale, A. D., Hamill, J. D., Blomstedt, C. K. & Gleadow, R. M., 2013, In: Plant Physiology and Biochemistry. 73, p. 83-92 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    An ATP synthase harboring an atypical γ-subunit is involved in ATP synthesis in tomato fruit chromoplasts

    Pateraki, Irini, Renato, M., Azcõn-Bieto, J. & Boronat, A., 2013, In: Plant Journal. 74, 1, p. 74-85 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Where is the line? Phylogeography and secondary contact of western Palearctic coal tits (Periparus ater: Aves, Passeriformes, Paridae)

    Pentzold, S., Tritsch, C., Martens, J., Tietze, D. T., Giacalone , G., Valvo, M. L., Nazarenko, A. A., Kvist, L. & Päckert, M., 2013, In: Zoologischer Anzeiger. 252, 3, p. 367-382 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Design and synthesis of LNA-based mercaptoacetamido-linked nucleoside dimers

    Sharma, V. K., Singh, S. K., Bohra, K., Reddy L., C. S., Khatri, V., Olsen, C. E. & Prasad, A. K., 2013, In: Nucleosides, Nucleotides and Nucleic Acids. 32, 5, p. 256-272 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Red beet as a model system for studying vacuolar transport of primary and secondary metabolites

    Shetty, N. P., Jørgensen, Kirsten & Jørgensen, Hans Jørgen Lyngs, 2013, Red beet biotechnology: food and pharmaceutical applications. Neelwarne, B. (ed.). Springer Science+Business Media, p. 75-89 15 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  27. Published

    Guaianolide Sesquiterpenoids: Pharmacology and biosynthesis

    Simonsen, H. T., Weitzel, C. & Christensen, Søren Brøgger, 2013, Natural products: phytochemistry, botany and metabolism of alkaloids, phenolics and terpenes. Ramawat, K. G. & Mérillon, J-M. (eds.). Springer, p. 3069-3098 30 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  28. Published

    Towards a molecular understanding of the biosynthesis of amaryllidaceae alkaloids in support of their expanding medical use

    Takos, A. M. & Rook, F., 2013, In: International Journal of Molecular Sciences (Online). 14, 6, p. 11713-11741 29 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    VTCdb: a gene co-expression database for the crop species Vitis vinifera (grapevine)

    Wong, D. C. J., Sweetman, C., Drew, D. P. & Ford, C. M., 16 Dec 2013, In: B M C Genomics. 14, 17 p., 882.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Characteristics of pebble- and cobble-sized clasts along the Curiosity rover traverse from Bradbury Landing to Rocknest

    Yingst, R. A., Kah, L. C., Palucis, M., Williams, M. E., Garvin, J., Bridges, J. C., Bridges, N., Deen, R. C., Farmer, J., Koefoed, A., Jensen, J. K. & Madsen, Morten Bo, 2013, In: Journal of Geophysical Research - Planets. 118, 11, p. 2361-2380

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Male-to-female transfer of 5-hydroxytryptophan glucoside during mating in Zyagena filipendulae (Lepidoptera)

    Zagrobelny, Mika, Motawie, Mohammed Saddik, Olsen, C. E., Bak, Søren & Møller, Birger Lindberg, 2013, In: Insect Biochemistry and Molecular Biology. 43, 11, p. 1037-1044 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    Gene discovery of modular diterpene metabolism in nonmodel systems

    Zerbe, P., Hamberger, B. R., Yuen, M. M. S., Chiang, A., Sandhu, H. K., Madilao, L. L., Nguyen, A., Hamberger, B., Bach, S. S. & Bohlmann, J., 2013, In: Plant Physiology. 162, 2, p. 1073-1091 19 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. 2014
  34. Published

    Specific glucosinolate analysis reveals variable levels of epimeric glucobarbarins, dietary precursors of 5-phenyloxazolidine-2-thiones, in watercress types with contrasting chromosime numbers

    Agerbirk, Niels, Olsen, C. E., Cipollini, D., Ørgaard, Marian, Linde-Laursen, I. & Chew, F. S., 2014, In: Journal of Agricultural and Food Chemistry. 62, 39, p. 9586-9596 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published

    Øvelsesvejledning Biokemi 1

    Agerbirk, Niels & Bjergegaard, C., 2014, 10 ed. Institut for Fødevarevidenskab, Det Natur- og Biovidenskabelige Fakultet, Københavns Universitet.

    Research output: Book/ReportCompendium/lecture notesEducation

  36. Published

    Heterologous stable expression of terpenoid biosynthetic genes using the moss Physcomitrella patens

    Bach, S. S., King, B. C., Zhan, X., Simonsen, H. T. & Hamberger, B. R., 2014, Plant isoprenoids: methods and protocols. Rodríguez-Concepción, M. (ed.). Springer, p. 257-271 15 p. (Methods in Molecular Biology, Vol. 1153).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  37. Published

    High-throughput testing of terpenoid biosynthesis candidate genes using transient expression in Nicotiana benthamiana

    Bach, S. S., Bassard, J. A., Andersen-Ranberg, Johan, Møldrup, M. E., Simonsen, H. T. & Hamberger, B. R., 2014, Plant isoprenoids: methods and protocols. Rodríguez-Concepción, M. (ed.). Springer, Vol. 4. p. 245-255 11 p. (Methods in Molecular Biology, Vol. 1153).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  38. Published

    Differential gene transcript accumulation in peas in response to powdery mildew (Erysiphe pisi) attack

    Barilli, E., Rubiales, D., Gjetting, T. & Lyngkjær, M. F., 2014, In: Euphytica. 198, 1, p. 13-28 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    Shedding light on protein folding, structural and functional dynamics by single molecule studies

    Bavishi, K. & Hatzakis, Nikos, 2014, In: Molecules. 19, 12, p. 19407-19434 28 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    Acylated glucosinolates with diverse acyl groups investigated by high resolution mass spectrometry and infrared multiphoton dissociation

    Bianco, G., Agerbirk, Niels, Losito, I. & Cataldi, T. R. I., 2014, In: Phytochemistry. 100, p. 92-102 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Mass spectrometry imaging of plant metabolites – principles and possibilities

    Bjarnholt, Nanna, Li, B., D'Alvise, J. & Janfelt, Christian, 2014, In: Natural Product Reports. 31, 6, p. 818-837 20 p.

    Research output: Contribution to journalReviewResearchpeer-review

  42. Published

    Characterization of two genes for the biosynthesis of abietane-type diterpenes in rosemary (Rosmarinus officinalis) glandular trichomes

    Brückner, K., Božić, D., Manzano, D., Papaefthimiou, D., Pateraki, Irini, Scheler, U., Ferrer, A., de Vos, R. C. H., Kanellis, A. K. & Tissier, A., 2014, In: Phytochemistry. 101, p. 52-64 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    COP1 E3 ligase protects HYL1 to retain microRNA biogenesis

    Cho, S. K., Ben Chaabane, S., Shah, P., Poulsen, C. P. & Yang, S. W., 2014, In: Nature Communications. 5, 10 p., 5867.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    Different geographical distributions of two chemotypes of Barbera vulgaris that differ in resistance to insects and a pathogen

    Christensen, S., Heimes, C., Agerbirk, Niels, Poulsen, V. K., Olsen, C. E. & Hauser, T. P., 2014, In: Journal of Chemical Ecology. 40, 5, p. 491-501 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    Correction of gene expression data: performance-dependency on inter-replicate and inter-treatment biases

    Darbani Shirvanehdeh, B., Stewart, C. N. J., Noeparvar, S. & Borg, S., 2014, In: Journal of Biotechnology. 188, p. 100-109 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    Reproducibility and reliability assays of the gene expression-measurements

    Darbani Shirvanehdeh, B. & Stewart, Jr., C. N., 2014, In: Journal of Biological Research-Thessaloniki. 21, 3

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    Galactosyltransferases from Arabidopsis thaliana in the biosynthesis of type II arabinogalactan: molecular interaction enhances enzyme activity

    Dilokpimol, A., Poulsen, C. P., Vereb, G., Kaneko, S., Schulz, Alexander & Geshi, N., 2014, In: B M C Plant Biology. 14, 14 p., 90.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Glucosinolate-related glucosides in Alliaria petiolata: sources of variation in the plant and different metabolism in an adapted specialist herbivore, Pieris rapae

    Frisch, T., Agerbirk, Niels, Davis, S., Cipollini, D., Olsen, C. E., Motawie, Mohammed Saddik, Bjarnholt, Nanna & Møller, Birger Lindberg, 2014, In: Journal of Chemical Ecology. 40, 10, p. 1063-1079 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Receptor kinase-mediated control of primary active proton pumping at the plasma membrane

    Fuglsang, Anja Thoe, Kristensen, A., Cuin, T. A., Schulze, W. X., Persson, R. J., Thuesen, K. H., Ytting, C. K., Oehlenschlæger, C. B., Mahmood, K., Søndergaard, T. E., Shabala, S. & Palmgren, Michael, 2014, In: Plant Journal. 80, 6, p. 951-964 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    Chemical defense balanced by sequestration and de novo biosynthesis in a lepidopteran specialist

    Fürstenberg-Hägg, J., Zagrobelny, Mika, Jørgensen, Kirsten, Vogel, H., Møller, Birger Lindberg & Bak, Søren, 2014, In: P L o S One. 9, 10, 9 p., e108745.

    Research output: Contribution to journalJournal articleResearchpeer-review

  51. Published

    Interplay between De Novo Biosynthesis and Sequestration of Cyanogenic Glucosides in Arthropods

    Fürstenberg-Hägg, J., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/ReportPh.D. thesisResearch

  52. Published

    Transcriptional regulation of de novo biosynthesis of cyanogenic glucosides throughout the life-cycle of the burnet moth Zyagena filipendulae (Lepidoptera)

    Fürstenberg-Hägg, J., Zagrobelny, Mika, Olsen, C. E., Jørgensen, Kirsten, Møller, Birger Lindberg & Bak, Søren, 2014, In: Insect Biochemistry and Molecular Biology. 49, p. 80-89 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

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