Section for Plant Biochemistry

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  1. 2015
  2. Published

    Evolution of substrate recognition sites (SRSs) in cytochromes P450 from Apiaceae exemplified by the CYP71AJ subfamily

    Dueholm, B., Krieger, C., Drew, D. P., Olry, A., Kamo, T., Taboureau, O., Weitzel, C., Bourgaud, F., Hehn, A. & Simonsen, H. T., 2015, In: BMC Evolutionary Biology. 15, 14 p., 122.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Expression patterns, molecular markers and genetic diversity of insect-susceptible and resistant Barbarea genotypes by comparative trnscriptome analysis

    Zhang, X., Liu, T., Wei, X., Qiu, Y., Song, J., Wang, H., Shen, D., Agerbirk, Niels & Li, X., 2015, In: B M C Genomics. 16, 16 p., 486.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Genome-wide association study of production and stability traits in barley cultivated under future climate scenarios

    Ingvordsen, C. H., Backes, G., Lyngkjær, M. F., Peltonen-Sainio, P., Jahoor, A., Mikkelsen, T. N. & Jørgensen, R. B., 2015, In: Molecular Breeding. 35, 14 p., 84.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Global medicinal uses of Euphorbia L. (Euphorbiaceae)

    Ernst, M., Grace, O. M., Saslis Lagoudakis, H., Nilsson, N., Simonsen, H. T. & Rønsted, Nina, 2015, In: Journal of Ethnopharmacology. 176, p. 90-101 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Glucosinolate hydrolysis products in the crucifer Barbarea vulgaris include a thiazolidine-2-one from a specific phenolic isomer as well as oxazolidine-2-thiones

    Agerbirk, Niels & Olsen, C. E., 2015, In: Phytochemistry. 115, p. 143-151 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Glycoproteomic analysis of seven major allergenic proteins reveals novel post-translational modifications

    Halim, Adnan, Carlsson, M. C., Mathiesen, C. B. K., Brand, S., Möller, S. R., Olsen, C. E., Vakhrushev, Sergey, Brimnes, J., Wurtzen, P. A., Ipsen, H., Petersen, Bent L & Wandall, Hans H., 2015, In: Molecular and Cellular Proteomics. 14, 1, p. 191-204 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Heterologous expression of the isopimaric acid pathway in Nicotiana benthamiana and the effect of N-terminal modifications of the involved cytochrome P450 enzyme

    Gnanasekaran, Thiyagarajan, Vavitsas, K., Andersen-Ranberg, Johan, Nielsen, A. J. Z., Olsen, C. E., Hamberger, B. R. & Jensen, Poul Erik, 2015, In: Journal of Biological Engineering. 9, 10 p., 24.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    How does garlic mustard lure and kill the west virginia white butterfly?

    Davis, S. L., Frisch, T., Bjarnholt, Nanna & Cipollini, D., 2015, In: Journal of Chemical Ecology. 41, 10, p. 948-955 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Identification and genome organization of saponin pathway genes from a wild crucifer, and their use for transient production of saponins in Nicotiana benthamiana

    Khakimov, Bekzod, Poulsen, V. K., Erthmann, P. Ø., Fukushima, E. O., Augustin, J. M., Olsen, C. E., Scholtalbers, J., Volpin, H., Andersen, S. B., Hauser, T. P., Muranaka, T. & Bak, Søren, 2015, In: The Plant Journal. 84, 3, p. 478-490 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Iminolactones from Schizophyllum commune

    Liu, X., Frydenvang, Karla Andrea, Liu, H., Zhai, L., Chen, M., Olsen, C. E. & Christensen, Søren Brøgger, 2015, In: Journal of Natural Products. 78, 5, p. 1165-1168 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Interplays between the cell wall and phytohormones in interaction between plants and necrotrophic pathogens

    Nafisi, M., Fimognari, L. & Sakuragi, Y., 2015, In: Phytochemistry. 112, p. 63-71 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Large-scale phenomics identifies primary and fine-tuning roles for CRKs in responses related to oxidative stress

    Bourdais, G., Burdiak, P., Gauthier, A., Nitsch, L., Salojärvi, J., Rayapuram, C., Idänheimo, N., Hunter, K., Kimura, S., Merilo, E., Vaattovaara, A., Oracz, K., Kaufholdt, D., Pallon, A., Anggoro, D. T., Glów, D., Lowe, J., Zhou, J., Mohammadi, O., Puukko, T. & 13 others, Albert, A., Lang, H., Ernst, D., Kollist, H., Brosché, M., Durner, J., Borst, J. W., Collinge, David B., Karpinski, S., Lyngkjær, M. F., Robatzek, S., Wrzaczek, M. & Kangasjärvi, J., 2015, In: P L o S Genetics. 11, 7, 36 p., e1005373.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Meta-analysis of Arabidopsis KANADI1 direct target genes identifies basic growth-promoting module acting upstream of hormonal signaling pathways

    Xie, Y., Straub, D., qmd783, qmd783, Brandt, R., Stahl, M., Martinez-Garcia, J. F. & Wenkel, Stephan, 2015, In: Plant Physiology. 35 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Metabolic engineering of Synechocystis sp. PCC 6803 for production of the plant diterpenoid manoyl oxide

    Englund, E., Andersen-Ranberg, Johan, Miao, R., Hamberger, B. R. & Lindberg, P., 2015, In: A C S Synthetic Biology. 4, 12, p. 1270-1278 9 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  16. Published

    Metabolism of the Cyanogenic Glucoside Dhurrin in Sorghum bicolor L. (Moench)

    Nielsen, L. J., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 151 p.

    Research output: Book/Report › Ph.D. thesis › Research

  17. Published

    Metabolism, excretion and avoidance of cyanogenic glucosides in insects with different feeding specialisations

    Pentzold, S., Zagrobelny, Mika, Bjarnholt, Nanna, Kroymann, J., Vogel, H., Olsen, C. E., Møller, Birger Lindberg & Bak, Søren, 2015, In: Insect Biochemistry and Molecular Biology. 66, p. 119-128 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    MiRNA Biogenesis and Intersecting Pathways

    Ben Chaabane, S., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 79 p.

    Research output: Book/Report › Ph.D. thesis › Research

  19. Published

    MicroProteins: small size - big impact

    qmd783, qmd783, Straub, D., Graeff, M. & Wenkel, Stephan, 2015, In: Trends in Plant Science. 20, 8, p. 477–482 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Multiple hydroxyphenethyl glucosinolate isomers and their tandem mass spectrometric destinction in a geographically structured polymorphism in the crucifer Barbarea vulgaris

    Agerbirk, Niels, Olsen, C. E., Heimes, C., Christensen, S., Bak, Søren & Hauser, T. P., 2015, In: Phytochemistry. 115, p. 130-142 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    NMR characterization of chemically synthesized branched alpha-dextrin model compounds

    Petersen, B. O., Motawie, Mohammed Saddik, Møller, Birger Lindberg, Hindsgaul, O. & Meier, S., 2015, In: Carbohydrate Research. 403, p. 149-156 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Nanodisc films for membrane protein studies by neutron reflection: effect of the protein scaffold choice

    Bertram, N., Laursen, Tomas, Barker, R., Bavishi, K., Møller, Birger Lindberg & Cardenas Gomez, M., 2015, In: Langmuir. 31, 30, p. 8386-8391 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    PUB22 and PUB23 U-BOX E3 ligases directly ubiquitinate RPN6, a 26S proteasome lid subunit, for subsequent degradation in Arabidopsis thaliana

    Cho, S. K., Bae, H., Ryu, M., Yang, S. W. & Kim, W. T., 2015, In: Biochemical and Biophysical Research Communications. 464, 4, p. 994-999 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Plasticity of specialized metabolism as mediated by dynamic metabolons

    Laursen, Tomas, Møller, Birger Lindberg & Bassard, J. A., 2015, In: Trends in Plant Science. 20, 1, p. 20-32 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Scent emission profiles from Darwin's orchid - Angraecum sesquipedale: investigation of the aldoxime metabolism using clustering analysis

    Nielsen, L. J. & Møller, Birger Lindberg, 2015, In: Phytochemistry. 120, p. 3-18 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Sesquiterpene lactone containing extracts from two cultivars of forage chicory (Cichorium intybus) show distinctive chemical profiles and in vitro activity against Ostertagia ostertagi

    Peña-Espinoza, M., Boas, U., Williams, Andrew Richard, Thamsborg, Stig Milan, Simonsen, H. T. & Enemark, H., 2015, In: International Journal for Parasitology: Drugs and Drug Resistance. 5, 3, p. 191-200 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Significant decrease in yield under future climate conditions: stability and production of 138 spring barley accessions

    Ingvordsen, C. H., Backes, G., Lyngkjær, M. F., Peltonen-Sainio, P., Jensen, J. D., Jalli, M., Jahoor, A., Rasmussen, M., Mikkelsen, T. N., Stockmarr, A. & Bagger Jørgensen, R., 2015, In: European Journal of Agronomy. 63, p. 105-113 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Stable expression of a bifunctional diterpene synthase in the chloroplast of Chlamydomonas reinhardtii

    Zedler, J. A. Z., Gangl, D., Hamberger, B. R., Purton, S. & Robinson, C., 2015, In: Journal of Applied Phycology. 27, 6, p. 2271-2277 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Stable heterologous expression of biologically active terpenoids in green plant cells

    Binti Khairul Ikram, N. K., Zhan, X., Pan, X., King, B. C. & Simonsen, H. T., 2015, In: Frontiers in Plant Science. 6, 10 p., 129.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Standards for plant synthetic biology: a common syntax for exchange of DNA parts

    Patron, N. J., Orzaez, D., Marillonnet, S., Warzecha, H., Matthewman, C., Youles, M., Raitskin, O., Leveau, A., Farré, G., Rogers, C., Smith, A., Hibberd, J., Webb, A. A. R., Locke, J., Schornack, S., Ajioka, J., Baulcombe, D. C., Zipfel, C., Kamoun, S., Jones, J. D. G. & 38 others, Kuhn, H., Robatzek, S., Van Esse, H. P., Sanders, D., Oldroyd, G., Martin, C., Field, R., O'Connor, S., Fox, S., Wulff, B., Miller, B., Breakspear, A., Radhakrishnan, G., Delaux, P., Loqué, D., Granell, A., Tissier, A., Shih, P., Brutnell, T. P., Quick, W. P., Rischer, H., Fraser, P. D., Aharoni, A., Raines, C., South, P. F., Ané, J., Hamberger, B. R., Langdale, J., Stougaard, J., Bouwmeester, H., Udvardi, M., Murray, J. A. H., Ntoukakis, V., Schäfer, P., Denby, K., Edwards, K. J., Osbourn, A. & Haseloff, J., 2015, In: New Phytologist. 208, 1, p. 13-19 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Taste detection of the non-volatile isothiocyanate moringin results in deterrence to glucosinolate-adapted insect larvae

    Müller, C., van Loon, J., Ruschioni, S., De Nicola, G. R., Olsen, C. E., Iori, R. & Agerbirk, Niels, 2015, In: Phytochemistry. 118, p. 139-148 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Thapsigargin - from Thapsia L. to Mipsagargin

    Andersen, T. B., Quinonero Lopez, C., Manczak, T., Martinez, K. A. & Simonsen, H. T., 2015, In: Molecules. 20, 4, p. 6113-6127 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    The bifurcation of the cyanogenic glucoside and glucosinolate biosynthetic pathways

    Sørensen, Mette, Kannangara, R. M., Olsen, C. E., Blomstedt, C. K., Gleadow, R. M., Jørgensen, Kirsten, Bak, Søren, Motawie, Mohammed Saddik & Møller, Birger Lindberg, 2015, In: The Plant Journal. 84, 3, p. 558-573 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Utilization of a high-throughput shoot imaging system to examine the dynamic phenotypic responses of a C4 cereal crop plant to nitrogen and water deficiency over time

    Neilson, Elizabeth Heather Jakobsen, Edwards, A. M., Blomstedt, C. K., Berger, B., Møller, Birger Lindberg & Gleadow, R. M., 2015, In: Journal of Experimental Botany. 66, 7, 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Vanillin-bioconversion and bioengineering of the most popular plant flavor and its De Novo biosynthesis in the vanilla orchid

    Gallage, N. J. & Møller, Birger Lindberg, 2015, In: Molecular Plant. 8, 1, p. 40-57 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Volatiles from the burnet Moth Zygaena filipendulae (Lepidoptera) and Associated flowers, and their involvement in mating communication

    Zagrobelny, Mika, Simonsen, H. T., Olsen, C. E., Bak, Søren & Møller, Birger Lindberg, 2015, In: Physiological Entomology. 40, 4, p. 284-295 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. 2014
  38. Published

    Elucidating the Role of Transport Processes in Leaf Glucosinolate Distribution

    Madsen, S. R., Olsen, C. E., Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 1 Nov 2014, In: Plant Physiology. 166, 3, p. 1450-1462

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Breaking & Entering

    Horst, M., Dalsgård, B., Davies, S. R., Glerup, C., Sandvik, K., Knudsen, J., Juul, A., Heinz, Nanna & Holm, Sune Hannibal, 22 Jun 2014

    Research output: Non-textual form › 2D/3D (psysical products) › Communication

  40. Published

    Tomato fruit chromoplasts behave as respiratory bioenergetic organelles during ripening

    Renato, M., Pateraki, Irini, Boronat, A. & Azcón-Bieto, J., 1 Jan 2014, In: Plant Physiology. 166, 2, p. 920-933 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Acylated glucosinolates with diverse acyl groups investigated by high resolution mass spectrometry and infrared multiphoton dissociation

    Bianco, G., Agerbirk, Niels, Losito, I. & Cataldi, T. R. I., 2014, In: Phytochemistry. 100, p. 92-102 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Analysis of peptide PSY1 responding transcripts in the two Arabidopsis plant lines: wild type and psy1r receptor mutant

    Mahmood, K., Kannangara, R. M., Jørgensen, Kirsten & Fuglsang, Anja Thoe, 2014, In: B M C Genomics. 15, 12 p., 441.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Anchoring a plant cytochrome P450 via PsaM to the thylakoids in Synechococcus sp. PCC 7002: evidence for light-driven biosynthesis

    Lassen, L. M. M., Nielsen, A. J. Z., Olsen, C. E., Bialek, W., Jensen, K., Møller, Birger Lindberg & Jensen, Poul Erik, 2014, In: P L o S One. 9, 7, 10 p., e102184.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Arabinogalactan glycosyltransferases target to a unique subcellular compartment that may function in unconventional secretion in plants

    Poulsen, C. P., Dilokpimol, A., Mouille, G., Burow, Meike & Geshi, N., 2014, In: Traffic. 15, 11, p. 1219-1234 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Arabinogalactan proteins: focus on carbohydrate active enzymes

    Knoch, E., Dilokpimol, A. & Geshi, N., 2014, In: Frontiers in Plant Science. 5, 9 p., 198.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    COP1 E3 ligase protects HYL1 to retain microRNA biogenesis

    Cho, S. K., Ben Chaabane, S., Shah, P., Poulsen, C. P. & Yang, S. W., 2014, In: Nature Communications. 5, 10 p., 5867.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Cassava genome from a wild ancestor to cultivated varieties

    Wang, W., Feng, B., Xiao, J., Xia, Z., Zhou, X., Li, P., Zhang, W., Wang, Y., Møller, B. L., Zhang, P., Luo, M-C., Xiao, G., Liu, J., Yang, J., Chen, S., Rabinowicz, P. D., Chen, X., Zhang, H-B., Ceballos, H., Lou, Q. & 60 others, Zou, M., Carvalho, L. J. C. B., Zeng, C., Xia, J., Sun, S., Fu, Y., Wang, H., Lu, C., Ruan, M., Zhou, S., Wu, Z., Liu, H., Kannangara, R. M., Jørgensen, Kirsten, Neale, R. L., Bonde, M., Heinz, Nanna, Zhu, W., Wang, S., Zhang, Y., Pan, K., Wen, M., Ma, P., Li, Z., Hu, M., Liao, W., Hu, W., Zhang, S., Pei, J., Guo, A., Guo, J., Zhang, J., Zhang, Z., Ye, J., Ou, W., Ma, Y., Liu, X., Tallon, L. J., Galens, K., Ott, S., Huang, J., Xue, J., An, F., Yao, Q., Lu, X., Fregene, M., Augusto Becerra Lopez-Lavalle, L., Wu, J., You, F. M., Chen, M., Hu, S., Wu, G., Zhong, S., Ling, P., Chen, Y., Wang, Q., Liu, G., Liu, B., Li, K. & Peng, M., 2014, In: Nature Communications. 5, 5110.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Characterization of two genes for the biosynthesis of abietane-type diterpenes in rosemary (Rosmarinus officinalis) glandular trichomes

    Brückner, K., Božić, D., Manzano, D., Papaefthimiou, D., Pateraki, Irini, Scheler, U., Ferrer, A., de Vos, R. C. H., Kanellis, A. K. & Tissier, A., 2014, In: Phytochemistry. 101, p. 52-64 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Chemical defense balanced by sequestration and de novo biosynthesis in a lepidopteran specialist

    Fürstenberg-Hägg, J., Zagrobelny, Mika, Jørgensen, Kirsten, Vogel, H., Møller, Birger Lindberg & Bak, Søren, 2014, In: P L o S One. 9, 10, 9 p., e108745.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Chemo-enzymatic synthesis of bicyclic 3-azido- and 3-amino-nucleosides

    Kumar, M., Sharma, V. K., Olsen, C. E. & Prasad, A. K., 2014, In: R S C Advances. 4, 70, p. 37231-37235 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Chemoenzymatic convergent synthesis of 2'-O,4'-C-Methyleneribonucleosides

    Sharma, V. K., Kumar, M., Olsen, C. E. & Prasad, A. K., 2014, In: Journal of Organic Chemistry. 79, 13, p. 6336-6341 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Chemoenzymatic synthesis of C-4'-Spiro-oxetanoribonucleosides

    Sharma, V., Kumar, M., Sharma, D., Olsen, C. E. & Prasad, A. K., 2014, In: Journal of Organic Chemistry. 79, 18, p. 8516-8521 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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