Section for Plant Biochemistry

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  1. 2016
  2. Published

    Methyl transfer in glucosinolate biosynthesis mediated by indole glucosinolate O-Methyltransferase 5

    Pfalz, M., Mukhaimar, M., Perreau, F., Kirk, J., Hansen, Cecilie Ida Cetti, Olsen, C. E., Agerbirk, Niels & Kroymann, J., 2016, In: Plant Physiology. 172, 4, p. 2190-2203 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    MicroProtein-mediated recruitment of CONSTANS into a TOPLESS trimeric complex represses flowering in Arabidopsis

    Graeff, M., Straub, D., Eguen, T. E., Dolde, U. M., Saltenis, Vandasue, Brandt, R. & Wenkel, Stephan, 2016, In: P L o S Genetics. 12, 3, 22 p., e1005959.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Microbial production of next-generation stevia sweeteners

    Olsson, K., Carlsen, S., Semmler, A., Simón, E., Mikkelsen, M. D. & Møller, Birger Lindberg, 2016, In: Microbial Cell Factories. 15, 14 p., 207.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Multiple essential MT1-MMP functions in tooth root formation, dentinogenesis, and tooth eruption

    Xu, H., Snider, T. N., Wimer, H. F., Yamada, S. S., Yang, T., Holmbeck, Kenn & Foster, B. L., 2016, In: Matrix Biology. 52-54, p. 266-283 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Oxidation and cyclization of Casbene in the biosynthesis of Euphorbia factors from mature seeds of Euphorbia lathyris L

    Luo, Dan, Callari, R., Hamberger, B., Wubshet, S. G., Nielsen, M. T., Andersen-Ranberg, Johan, Hallström, B. M., Cozzi, F., Heider, H., Møller, Birger Lindberg, Stærk, Dan & Hamberger, B. R., 2016, In: Proceedings of the National Academy of Sciences of the United States of America. 113, 34, p. E5082-E5089 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Phosphorylation at serine 52 and 635 does not alter the transport properties of glucosinolate transporter AtGTR1

    Jørgensen, M. E., Olsen, C. E., Halkier, Barbara Ann & Nour-Eldin, Hussam Hassan, 2016, In: Plant Signalling & Behavior. 11, 2, 6 p., e1071751.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Post-translational regulation of miRNA pathway components, AGO1 and HYL1, in plants

    Cho, S. K., Ryu, M. Y., Shah, P., Poulsen, C. P. & Yang, S. W., 2016, In: Molecules and Cells. 39, 8, p. 581-586 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Regulation of MIR165/166 by class II and class III homeodomain leucine zipper proteins establishes leaf polarity

    Merelo, P., Ram, H., Caggiano, M. P., Ohno, C., Ott, F., Straub, D., Graeff, M., Cho, S. K., Yang, S. W., Wenkel, Stephan & Heisler, M. G., 2016, In: Proceedings of the National Academy of Sciences of the United States of America. 113, 42, p. 11973-11978 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Role of the Colletotrichum acutatum sesquiterpene synthase CaTPS in the biosynthesis of sesquiterpenoids

    Amby, Daniel Buchvaldt, Manczak, T., Petersen, Mikael Agerlin, Sundelin, T., Weitzel, C., Grajewski, M., Simonsen, H. T. & Jensen, Birgit, 2016, In: Microbiology. 162, 10, p. 1773-1783

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Screening for triterpenoid saponins in plants using hyphenated analytical platforms

    Khakimov, Bekzod, Tseng, L. H., Godejohann, M., Bak, Søren & Engelsen, Søren Balling, 2016, In: Molecules. 21, 12, 19 p., 1614.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Structural determinants of reductive terpene cyclization in iridoid biosynthesis

    Kries, H., Caputi, L., Stevenson, C. E. M., Kamileen, M. O., Sherden, N. H., Geu-Flores, Fernando, Lawson, D. M. & O'Connor, S. E., 2016, In: Nature Chemical Biology. 12, 1, p. 6-8 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    The Arabidopsis NPF3 protein is a GA transporter

    Tal, I., Zhang, Y., Jørgensen, M. E., Pisanty, O., Barbosa, I. C. R., Zourelidou, M., Regnault, T., Crocoll, C., Olsen, C. E., Weinstain, R., Schwechheimer, C., Halkier, Barbara Ann, Nour-Eldin, Hussam Hassan, Estelle, M. & Shani, E., 2016, In: Nature Communications. 7, 20 p., 11486.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    The Mystery of Spot Blotch Disease Caused by the Fungal Pathogen Bipolaris sorokiniana on Barley (Hordeum vulgare L)

    Gjendal, N., 2016, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  15. Published

    The biosynthetic gene cluster for the cyanogenic glucoside dhurrin in Sorghum bicolor contains its co-expressed vacuolar MATE transporter

    Darbani Shirvanehdeh, B., Motawie, Mohammed Saddik, Olsen, C. E., Nour-Eldin, Hussam Hassan, Møller, Birger Lindberg & Rook, F., 2016, In: Scientific Reports. 6, 8 p., 37079.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Tomato fruit carotenoid biosynthesis is adjusted to actual ripening progression by a light-dependent mechanism

    Llorente, B., D'Andrea, L., Aguila Ruiz-Sola, M., Botterweg Paredes, E., Pulido, P., Andilla, J., Loza-Alvarez, P. & Rodriguez-Concepcion, M., 2016, In: Plant Journal. 85, 1, p. 107-119 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Transcriptome sequencing in narrow-leafed lupin (Lupinus angustifolius): combining short- and long-read sequencing platforms

    Yang, T., Nagy, I., Asp, T. & Geu-Flores, Fernando, 2016, In: Planta Medica. 82, S 01, 1 p.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  18. Published

    Transfer of the cytochrome P450-dependent dhurrin pathway from Sorghum bicolor into Nicotiana tabacum chloroplasts for light-driven synthesis

    Gnanasekaran, Thiyagarajan, Karcher, D., Nielsen, A. J. Z., Martens, Helle Jakobe, Ruf, S., Kroop, X., Olsen, C. E., Motawie, Mohammed Saddik, Pribil, Mathias, Møller, Birger Lindberg, Bock, R. & Jensen, Poul Erik, 2016, In: Journal of Experimental Botany. 67, 8, p. 2495-2506 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Two key polymorphisms in a newly discovered allele of the Vitis vinifera TPS24 gene are responsible for the production of the rotundone precursor α-guaiene

    Drew, D. P., Andersen, T. B., Sweetman, C., Møller, Birger Lindberg, Ford, C. & Simonsen, H. T., 2016, In: Journal of Experimental Botany. 67, 3, p. 799-808 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Anthelmintic activity of chicory (Cichorium intybus): in vitro effects on swine nematodes and relationship to sesquiterpene lactone composition

    Williams, Andrew Richard, Peña-Espinoza, M. A., Boas, U., Simonsen, H. T., Enemark, H. L. & Thamsborg, Stig Milan, May 2016, In: Parasitology. 143, 6, p. 770-777 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. 2017
  22. Published

    Thapsia garganica L. in vitro plants as a new production platform of thapsigargins

    Quinonero Lopez, C., 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  23. Published

    An NPF transporter exports a central monoterpene indole alkaloid intermediate from the vacuole

    Payne, R., Xu, Deyang, Foureau, E., Ines Soares Teto Carqueijeiro, M., Oudin, A., Dugé de Bernonville, T., Novák, V., Burow, Meike, Olsen, C. E., Jones, D. M., C. Tatsis, E., Pendleton, A., Halkier, Barbara Ann, Geu-Flores, Fernando, Courdavault, V., Nour-Eldin, Hussam Hassan & O'Connor, S. E., 2017, In: Nature Plants. 3, 9 p., 16208.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    An expression tag toolbox for microbial production of membrane bound plant cytochromes P450

    Vazquez-Albacete, D., Cavaleiro, A. M., Christensen, U., Seppälä, S., Møller, Birger Lindberg & Nørholm, M. H. H., 2017, In: Biotechnology and Bioengineering. 114, 4, p. 751-760 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Artemisinin production in the moss Physcomitrella patens

    Binti Khairul Ikram, N. K., 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 135 p.

    Research output: Book/Report › Ph.D. thesis › Research

  26. Published

    Assembly of dynamic P450-mediated metabolons - order versus chaos

    Bassard, J. A., Møller, Birger Lindberg & Laursen, Tomas, 2017, In: Current Biology. 3, 1, p. 37-51 15 p.

    Research output: Contribution to journal › Review › Research › peer-review

  27. Published

    Biosynthesis of macrocyclic diterpenoids in Euphorbia lathyris L.

    Luo, Dan, 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  28. Published

    Biosynthesis, regulation, and significance of cyanogenic glucosides

    Nielsen, L. J., Bjarnholt, Nanna, Blomstedt, C., Gleadow, R. M. & Møller, Birger Lindberg, 2017, Plant Specialized Metabolism: Genomics, Biochemistry, and Biological Functions. CRC Press, p. 131-156

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  29. Published

    Bottom-up elucidation of glycosidic bond stereochemistry

    Gray, C. J., Schindler, B., Migas, L. G., Picmanova, M., Allouche, A. R., Green, A. P., Mandal, S., Motawie, Mohammed Saddik, Sánchez Pérez, R., Bjarnholt, Nanna, Møller, Birger Lindberg, Rijs, A. M., Barran, P. E., Compagnon, I., Eyers, C. E. & Flitsch, S. L., 2017, In: Analytical Chemistry. 89, 8, p. 4540-4549 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Characterization of a membrane-bound C-glucosyltransferase responsible for carminic acid biosynthesis in Dactylopius coccus Costa

    Kannangara, R. M., Siukstaite, L., Borch-Jensen, J., Madsen, B., Kongstad, Kenneth Thermann, Stærk, Dan, Bennedsen, M., Okkels, F. T., Rasmussen, S. A., Larsen, T. O., Frandsen, R. J. N. & Møller, Birger Lindberg, 2017, In: Nature Communications. 8, 12 p., 1987.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Chemical Synthesis of L-Fucose Derivatives for Acceptor Specificity Characterisation of Plant Cell Wall Glycosyltransferases

    Damager, I., Olsen, C. E., Madsen, J. E., Jørgensen, Bodil, Petersen, Bent L, Ulvskov, Peter, Møller, Birger Lindberg & Motawie, Mohammed Saddik, 2017, In: ChemistrySelect. 2, 3, p. 997-1007 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Chemical control of flowering time

    Ionescu, I. A., Møller, Birger Lindberg & Sánchez Pérez, R., 2017, In: Journal of Experimental Botany. 68, 3, p. 369-382 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Click chemistry-based tracking reveals putative cell wall-located auxin binding sites in expanding cells

    Mravec, Jozef, Kracun, S. K., Zemlyanskaya, E., Rydahl, M. G., Guo, X., Picmanova, M., Sørensen, K. K., Růžička, K. & Willats, W. G. T., 2017, In: Scientific Reports. 7, 13 p., 15988.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Cross-species genome-wide identification of evolutionary conserved microproteins

    Straub, D. & Wenkel, Stephan, 2017, In: Genome Biology and Evolution. 9, 3, p. 777-789 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Cyanogenic glucosides and derivatives in almond and sweet cherry flower buds from dormancy to flowering

    Del Cueto, J., Ionescu, I. A., Picmanova, M., Gericke, Oliver, Motawia, M. S., Olsen, C. E., Campoy, J. A., Dicenta, F., Møller, Birger Lindberg & Sánchez Pérez, R., 2017, In: Frontiers in Plant Science. 8, 16 p., 800.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    De-bugging and maximizing plant cytochrome P450 production in Escherichia coli with C-terminal GFP fusions

    Christensen, U., Albacete, D. V., Søgaard, K. M., Hobel, T., Nielsen, M. T., Harrison, S. J., Hansen, A. H., Møller, Birger Lindberg, Seppälä, S. & Nørholm, M. H. H., 2017, In: Applied Microbiology and Biotechnology. 101, 10, p. 4103-4113 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Degradation of lignin β-aryl ether units in Arabidopsis thaliana expressing LigD, LigF and LigG from Sphingomonas paucimobilis SYK-6

    Mnich, E., Vanholme, R., Oyarce, P., Liu, S., Lu, F., Goeminne, G., Jørgensen, Bodil, Motawie, Mohammed Saddik, Boerjan, W., Ralph, J., Ulvskov, Peter, Møller, Birger Lindberg, Bjarnholt, Nanna & Harholt, J., 2017, In: Plant Biotechnology Journal. 15, 5, p. 581-593 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Design and direct assembly of synthesized uracil-containing non-clonal DNA fragments into vectors by USERTM cloning

    Jørgensen, M. E., Wulff, N., Nafisi, M., Xu, Deyang, Wang, Cuiwei, Lambertz, S. K., Belew, Zeinu Mussa & Nour-Eldin, Hussam Hassan, 2017, In: Bio-protocol. 7, 22, 11 p., e2615.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Development of a virus-induced gene silencing (VIGS) system for Spinacia oleracea L.

    Lee, J., Cao, D. V., Kim, J., Pamplona, R. S., Ahn, J., Cho, S. K., Yang, S. W., Riu, K. Z. & Boo, K. H., 2017, In: In Vitro Cellular and Developmental Biology - Plant. 53, 2, p. 97-103 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Development of novel monoclonal antibodies against starch and ulvan - implications for antibody production against polysaccharides with limited immunogenicity

    Rydahl, M. G., Kracun, S. K., Fangel, J. U., Michel, G., Guillouzo, A., Génicot, S., Mravec, Jozef, Harholt, J., Wilkens, C., Motawie, Mohammed Saddik, Svensson, B., Tranquet, O., Ralet, M., Jørgensen, Bodil, Domozych, D. S. & Willats, W. G. T., 2017, In: Scientific Reports. 7, 1, 13 p., 9326.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Developmentally regulated glucosylation of bitter triterpenoid in cucumber by the Udp-Glucosyltransferase Ugt73am3

    Zhong, Y., Xue, X., Liu, Z., Ma, Y., Zeng, K., Han, L., Qi, J., Ro, D., Bak, Søren, Huang, S., Zhou, Y. & Shang, Y., 2017, In: Molecular Plant. 10, 7, p. 1000-1003 4 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  42. Published

    From metabolome to phenotype: GC-MS metabolomics of developing mutant barley seeds reveals effects of growth, temperature and genotype

    Khakimov, Bekzod, Rasmussen, Morten Arendt, Kannangara, R. M., Jespersen, Birthe P Møller, Munck, L. & Engelsen, Søren Balling, 2017, In: Scientific Reports. 7, 1, 12 p., 8195.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Genomic innovations, transcriptional plasticity and gene loss underlying the evolution and divergence of two highly polyphagous and invasive Helicoverpa pest species

    Pearce, S. L., Clarke, D. F., East, P. D., Elfekih, S., Gordon, K. H. J., Jermiin, L. S., McGaughran, A., Oakeshott, J. G., Papanikolaou, A., Perera, O. P., Rane, R. V., Richards, S., Tay, W. T., Walsh, T. K., Anderson, A., Anderson, C. J., Asgari, S., Board, P. G., Bretschneider, A., Campbell, P. M. & 42 others, Chertemps, T., Christeller, J. T., Coppin, C. W., Downes, S. J., Duan, G., Farnsworth, C. A., Good, R. T., Han, L. B., Han, Y. C., Hatje, K., Horne, I., Huang, Y. P., Hughes, D. S. T., Jacquin-Joly, E., James, W., Jhangiani, S., Kollmar, M., Kuwar, S. S., Li, S., Liu, N., Maibeche, M. T., Miller, J. R., Montagne, N., Perry, T., Qu, J., Song, S. V., Sutton, G. G., Vogel, H., Walenz, B. P., Xu, W., Zhang, H., Zou, Z., Batterham, P., Edwards, O. R., Feyereisen, R., Gibbs, R. A., Heckel, D. G., McGrath, A., Robin, C., Scherer, S. E., Worley, K. C. & Wu, Y. D., 2017, In: BMC Biology. 15, 1, 30 p., 63.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    HIGLE is a bifunctional homing endonuclease that directly interacts with HYL1 and SERRATE in Arabidopsis thaliana

    Cho, S. K., Ryu, M. Y., Poulsen, C., Kim, J. H., Oh, T. R., Choi, S. W., Kim, M., Yang, J., Boo, K. H., Geshi, N., Kim, W. T. & Yang, S. W., 2017, In: FEBS Letters. 591, 10, p. 1383-1393 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Hydroxyl and methoxyl derivatives of benzylglucosinolate in Lepidium densiflorum with hydrolysis to isothiocyanates and non-isothiocyanate products: substitution governs product type and mass spectral fragmentation

    Pagnotta, E., Agerbirk, Niels, Olsen, C. E., Ugolini, L., Cinti, S. & Lazzeri, L., 2017, In: Journal of Agricultural and Food Chemistry. 65, 15, p. 3167-3178 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Identification and characterization of biosynthetic components involved in Vitex agnus-castus diterpenes biosynthesis

    Sundram, T. C. M., 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  47. Published

    Identification and evolution of a plant cell wall specific glycoprotein glycosyl transferase, ExAD

    Möller, S. R., Yi, X., Vel?squez, S. M., Gille, S., Hansen, P., Poulsen, C. P., Olsen, C. E., Rejzek, M., Parsons, H. T., Yang, Zhang, Wandall, Hans H., Clausen, Henrik, Field, R. A., Pauly, M., Estevez, J. M., Harholt, J., Ulvskov, Peter & Petersen, Bent L, 2017, In: Scientific Reports. 7, 16 p., 45341.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Identification of novel components in microProtein signalling

    Saltenis, Vandasue, 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  49. Published

    Isolation and structural characterization of echinocystic acid triterpenoid saponins from the Australian medicinal and food plant Acacia ligulata

    Knudsen, D. J., Ndi, C. P., Crocoll, C., Simpson, B. S., Khakimov, Bekzod, Guzman-Genuino, R. M., Hayball, J. D., Xing, X., Bulone, V., Weinstein, P., Møller, Birger Lindberg & Semple, S. J., 2017, In: Journal of Natural Products. 80, 10, p. 2692-2698 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Localization and in-vivo characterization of Thapsia garganica CYP76AE2 indicates a role in thapsigargin biosynthesis

    Andersen, T. B., Martinez-Swatson, K. A., Rasmussen, S. A., Boughton, B. A., Jørgensen, Kirsten, Andersen-Ranberg, Johan, Nyberg, N., Christensen, Søren Brøgger & Simonsen, H. T., 2017, In: Plant Physiology. 174, 1, p. 56-72 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    MPSR1 is a cytoplasmic PQC E3 ligase for eliminating emergent misfolded proteins in Arabidopsis thaliana

    Kim, J. H., Cho, S. K., Oh, T. R., Ryu, M. Y., Yang, S. W. & Kim, W. T., 2017, In: Proceedings of the National Academy of Sciences of the United States of America. 114, 46, p. E10009-E10017 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    MicroRNA Biomarkers in Neurodegenerative Diseases and Emerging Nano-Sensors Technology

    Shah, P., Cho, S. K., Thulstrup, Peter Waaben, Bjerrum, Morten Jannik, Lee, P. H., Kang, J., Bhang, Y. & Yang, S. W., 2017, In: Journal of Movement Disorders. 10, 1, p. 18-28 11 p.

    Research output: Contribution to journal › Review › Research › peer-review

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