Section for Plant Biochemistry

  1. 2014
  2. Published

    Elucidating the Role of Transport Processes in Leaf Glucosinolate Distribution

    Madsen, S. R., Olsen, C. E., Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 1 Nov 2014, In: Plant Physiology. 166, 3, p. 1450-1462

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. 2015
  4. Published

    Lotus japonicus flowers are defended by a cyanogenic β-glucosidase with highly restricted expression to essential reproductive organs

    Lai, D., Picmanova, M., Hachem, M. A., Motawie, Mohammed Saddik, Olsen, C. E., Møller, Birger Lindberg, Rook, F. & Takos, A. M., 2015, In: Plant Molecular Biology. 89, 1-2, p. 21-34 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    A functional EXXEK motif is essential for proton coupling and active glucosinolate transport by NPF2.11

    Jørgensen, M. E., Olsen, C. E., Geiger, D., Mirza, Osman Asghar, Halkier, Barbara Ann & Nour-Eldin, Hussam Hassan, 2015, In: Plant and Cell Physiology. 56, 12, p. 2340-2350 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    A multivariate approach for high throughput pectin profiling by combining glycan microarrays with monoclonal antibodies

    Sousa, A. G., Isager Ahl, Louise, Pedersen, H. L., Fangel, J. U., Sørensen, S. O. & Willats, W. G. T., 2015, In: Carbohydrate Research. 409, p. 41-47 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    A recycling pathway for cyanogenic glycosides evidenced by the comparative metabolic profiling in three cyanogenic plant species

    Picmanova, M., Neilson, Elizabeth Heather Jakobsen, Motawie, Mohammed Saddik, Olsen, C. E., Agerbirk, Niels, Gray, C. J., Flitsch, S., Meier, S., Silvestro, D., Jørgensen, Kirsten, Sánchez Pérez, R., Møller, Birger Lindberg & Bjarnholt, Nanna, 2015, In: Biochemical Journal. 469, 3, p. 375-389 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Accumulation of secondary metabolites in healthy and diseased barley, grown under future climate levels of CO2, ozone and temperature

    Mikkelsen, B. L., Olsen, C. E. & Lyngkjær, M. F., 2015, In: Phytochemistry. 118, p. 162-173 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Acetylation of cell wall is required for structural integrity of the leaf surface and exerts a global impact on plant stress responses

    Nafisi, M., Stranne, M., Fimognari, L., Atwell, S., Martens, Helle Jakobe, Pedas, P. R., Hansen, S. F., Nawrath, C., Scheller, H. V., Kliebenstein, D. J. & Sakuragi, Y., 2015, In: Frontiers in Plant Science. 6, 13 p., 550.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Additional diterpenes from Physcomitrella patens synthesized by copalyl diphosphate/kaurene synthase (PpCPS/KS)

    Zhan, X., Bach, S. S., Hansen, N. L., Lunde, C. & Simonsen, H. T., 2015, In: Plant Physiology and Biochemistry. 96, p. 110-114 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Assembly of highly standardized gene fragments for high-level production of porphyrins in E. coli

    Nielsen, M. T., Madsen, K. M., Seppälä, S., Riisberg, L., Harrison, S. J., Møller, Birger Lindberg & Nørholm, M. H. H., 2015, In: A C S Synthetic Biology. 4, 3, p. 274-282 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    CYP76C1 (Cytochrome P450)-mediated linalool metabolism and the formation of volatile and soluble linalool oxides in Arabidopsis flowers: a strategy for defense against floral antagonists

    Boachon, B., Junker, R. R., Miesch, L., Bassard, J. A., Höfer, R., Caillieaudeaux, R., Seidel, D. E., Lesot, A., Heinrich, C., Ginglinger, J., Allouche, L., Vincent, B., Wahyuni, D. S. C., Paetz, C., Beran, F., Miesch, M., Schneider, B., Leiss, K. & Werck-Reichhart, D., 2015, In: The Plant Cell. 27, 10, p. 2972-2990 19 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Cesium toxicity alters MicroRNA processing and AGO1 expressions in Arabidopsis thaliana

    Jung, I. L., Ryu, M., Cho, S. K., Shah, P., Lee, J. H., Bae, H., Kim, I. G. & Yang, S. W., 2015, In: P L o S One. 10, 5, 17 p., e0125514.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Characterization of Genes Involved in Sesquiterpenoid Biosynthesis from Thapsia garganica and Thapsia laciniata

    Andersen, T. B., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 223 p.

    Research output: Book/ReportPh.D. thesisResearch

  15. Published

    Chemo- and regioselective functionalization of nortrilobolide: application for semi-synthesis of the natural product 2-acetoxytrilobolide

    Doan, T. Q. N., Crestey, F., Olsen, C. E. & Christensen, Søren Brøgger, 2015, In: Journal of Natural Products. 78, 6, p. 1406-1414

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Complex interplay of future climate levels of CO2, ozone and temperature on susceptibility to fungal diseases in barley

    Mikkelsen, B. L., Bagger Jørgensen, R. & Lyngkjær, M. F., 2015, In: Plant Pathology. 64, 2, p. 319-327 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Cu(I)-catalyzed efficient synthesis of 2′-Triazolo-nucleoside conjugates

    Mathur, D., Rana, N., Olsen, C. E., Parmar, V. S. & Prasad, A. K., 2015, In: Journal of Heterocyclic Chemistry. 52, 3, p. 701-710 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Cytochrome P450-enzymes involved in the biosynthesis of mono- and sesquiterpenes

    Weitzel, C. & Simonsen, H. T., 2015, In: Phytochemistry Reviews. 14, 1, p. 7-24 18 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Cytochromes P450 for terpene functionalisation and metabolic engineering

    Pateraki, Irini, Heskes, A. M. & Hamberger, B. R., 2015, Biotechnology of Isoprenoids. Springer, p. 107-139 33 p. (Advances in Biochemical Engineering. Biotechnology, Vol. 148).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  20. Published

    DESI-MS imaging of metabolites in various plant materials – a matter of sample preparation

    Kato, L., Rook, F., Møller, Birger Lindberg, Hansen, S. H. & Janfelt, Christian, 2015.

    Research output: Contribution to conferencePosterResearch

  21. Published

    DNA/RNA chimera templates improve the emission intensity and target the accessibility of silver nanocluster-based sensors for human microRNA detection

    Shah, P., Choi, S. W., Kim, H., Cho, S. K., Thulstrup, Peter Waaben, Bjerrum, Morten Jannik, Bhang, Y., Ahn, J. C. & Yang, S. W., 2015, In: Analyst. 140, 10, p. 3422-3430 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Deciphering mineral homeostasis in barley seed transfer cells at transcriptional level

    Darbani Shirvanehdeh, B., Noeparvar, S. & Borg, S., 2015, In: PLoS ONE. 10, 11, 26 p., e0141398.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Derivatization of isothiocyanates and their reactive adducts for chromatographic analysis

    Agerbirk, Niels, De Nicola, G. R., Olsen, C. E., Mueller, C. & Iori, R., 2015, In: Phytochemistry. 118, p. 109-115 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Design and synthesis of triazole-linked xylo-nucleoside dimers

    Srivastava, S., Singh, S. K., Sharma, V. K., Mangla, P., Olsen, C. E. & Prasad, A. K., 2015, In: Nucleosides, Nucleotides and Nucleic Acids. 34, 6, p. 388-399 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Development of a fluorescence-based assay for functional studies of transporter proteins on the single molecule level

    Veshaguri, S., Christensen, S. F., Møller, M. P., Ghale, G., Lohr, C., Christensen, A. L., Tutkus, M., Kemmer, G. C., Jørgensen, I. L., Justesen, B. H., Curran, P., Pomorski, Thomas Guenther, Mindell, J. & Stamou, Dimitrios, 2015, In: Biophysical Journal. 108, 2, Supplement 1, p. 187a 1 p.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  26. Published

    Discovery of a P450-catalyzed step in vindoline biosynthesis: a link between the aspidosperma and eburnamine alkaloids

    Kellner, F., Geu-Flores, Fernando, Sherden, N. H., Brown, S., Foureau, E., Courdavault, V. & O'Connor, S. E., 2015, In: Chemical Communications. 51, 36, p. 7626-7628 3 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Diversified glucosinolate metabolism: biosynthesis of hydrogen cyanide and of the hydroxynitrile glucoside alliarinoside in relation to sinigrin metabolism in Alliaria petiolata

    Frisch, T., Motawie, Mohammed Saddik, Olsen, C. E., Agerbirk, Niels, Møller, Birger Lindberg & Bjarnholt, Nanna, 2015, In: Frontiers in Plant Science. 6, 16 p., 926.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Published

    Eco-efficient production of spring barley in a changed climate: A Life Cycle Assessment including primary data from future climate scenarios

    Niero, M., Ingvordsen, C. H., Peltonen-Sainio, P., Jalli, M., Lyngkjær, M. F., Hauschild, M. Z. & Jørgensen, R. B., 2015, In: Agricultural Systems. 136, p. 46-60 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    Evolution of substrate recognition sites (SRSs) in cytochromes P450 from Apiaceae exemplified by the CYP71AJ subfamily

    Dueholm, B., Krieger, C., Drew, D. P., Olry, A., Kamo, T., Taboureau, O., Weitzel, C., Bourgaud, F., Hehn, A. & Simonsen, H. T., 2015, In: BMC Evolutionary Biology. 15, 14 p., 122.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Expression patterns, molecular markers and genetic diversity of insect-susceptible and resistant Barbarea genotypes by comparative trnscriptome analysis

    Zhang, X., Liu, T., Wei, X., Qiu, Y., Song, J., Wang, H., Shen, D., Agerbirk, Niels & Li, X., 2015, In: B M C Genomics. 16, 16 p., 486.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Genome-wide association study of production and stability traits in barley cultivated under future climate scenarios

    Ingvordsen, C. H., Backes, G., Lyngkjær, M. F., Peltonen-Sainio, P., Jahoor, A., Mikkelsen, T. N. & Jørgensen, R. B., 2015, In: Molecular Breeding. 35, 14 p., 84.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    Global medicinal uses of Euphorbia L. (Euphorbiaceae)

    Ernst, M., Grace, O. M., Saslis Lagoudakis, H., Nilsson, N., Simonsen, H. T. & Rønsted, Nina, 2015, In: Journal of Ethnopharmacology. 176, p. 90-101 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    Glucosinolate hydrolysis products in the crucifer Barbarea vulgaris include a thiazolidine-2-one from a specific phenolic isomer as well as oxazolidine-2-thiones

    Agerbirk, Niels & Olsen, C. E., 2015, In: Phytochemistry. 115, p. 143-151 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    Glycoproteomic analysis of seven major allergenic proteins reveals novel post-translational modifications

    Halim, Adnan, Carlsson, M. C., Mathiesen, C. B. K., Brand, S., Möller, S. R., Olsen, C. E., Vakhrushev, Sergey, Brimnes, J., Wurtzen, P. A., Ipsen, H., Petersen, Bent L & Wandall, Hans H., 2015, In: Molecular and Cellular Proteomics. 14, 1, p. 191-204 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published

    Heterologous expression of the isopimaric acid pathway in Nicotiana benthamiana and the effect of N-terminal modifications of the involved cytochrome P450 enzyme

    Gnanasekaran, Thiyagarajan, Vavitsas, K., Andersen-Ranberg, Johan, Nielsen, A. J. Z., Olsen, C. E., Hamberger, B. R. & Jensen, Poul Erik, 2015, In: Journal of Biological Engineering. 9, 10 p., 24.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    How does garlic mustard lure and kill the west virginia white butterfly?

    Davis, S. L., Frisch, T., Bjarnholt, Nanna & Cipollini, D., 2015, In: Journal of Chemical Ecology. 41, 10, p. 948-955 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. Published

    Identification and genome organization of saponin pathway genes from a wild crucifer, and their use for transient production of saponins in Nicotiana benthamiana

    Khakimov, Bekzod, Poulsen, V. K., Erthmann, P. Ø., Fukushima, E. O., Augustin, J. M., Olsen, C. E., Scholtalbers, J., Volpin, H., Andersen, S. B., Hauser, T. P., Muranaka, T. & Bak, Søren, 2015, In: The Plant Journal. 84, 3, p. 478-490 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published

    Iminolactones from Schizophyllum commune

    Liu, X., Frydenvang, Karla Andrea, Liu, H., Zhai, L., Chen, M., Olsen, C. E. & Christensen, Søren Brøgger, 2015, In: Journal of Natural Products. 78, 5, p. 1165-1168 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    Interplays between the cell wall and phytohormones in interaction between plants and necrotrophic pathogens

    Nafisi, M., Fimognari, L. & Sakuragi, Y., 2015, In: Phytochemistry. 112, p. 63-71 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    Large-scale phenomics identifies primary and fine-tuning roles for CRKs in responses related to oxidative stress

    Bourdais, G., Burdiak, P., Gauthier, A., Nitsch, L., Salojärvi, J., Rayapuram, C., Idänheimo, N., Hunter, K., Kimura, S., Merilo, E., Vaattovaara, A., Oracz, K., Kaufholdt, D., Pallon, A., Anggoro, D. T., Glów, D., Lowe, J., Zhou, J., Mohammadi, O., Puukko, T. & 13 others, Albert, A., Lang, H., Ernst, D., Kollist, H., Brosché, M., Durner, J., Borst, J. W., Collinge, David B., Karpinski, S., Lyngkjær, M. F., Robatzek, S., Wrzaczek, M. & Kangasjärvi, J., 2015, In: P L o S Genetics. 11, 7, 36 p., e1005373.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Meta-analysis of Arabidopsis KANADI1 direct target genes identifies basic growth-promoting module acting upstream of hormonal signaling pathways

    Xie, Y., Straub, D., qmd783, qmd783, Brandt, R., Stahl, M., Martinez-Garcia, J. F. & Wenkel, Stephan, 2015, In: Plant Physiology. 35 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Metabolic engineering of Synechocystis sp. PCC 6803 for production of the plant diterpenoid manoyl oxide

    Englund, E., Andersen-Ranberg, Johan, Miao, R., Hamberger, B. R. & Lindberg, P., 2015, In: A C S Synthetic Biology. 4, 12, p. 1270-1278 9 p.

    Research output: Contribution to journalLetterResearchpeer-review

  43. Published

    Metabolism of the Cyanogenic Glucoside Dhurrin in Sorghum bicolor L. (Moench)

    Nielsen, L. J., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 151 p.

    Research output: Book/ReportPh.D. thesisResearch

  44. Published

    Metabolism, excretion and avoidance of cyanogenic glucosides in insects with different feeding specialisations

    Pentzold, S., Zagrobelny, Mika, Bjarnholt, Nanna, Kroymann, J., Vogel, H., Olsen, C. E., Møller, Birger Lindberg & Bak, Søren, 2015, In: Insect Biochemistry and Molecular Biology. 66, p. 119-128 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    MiRNA Biogenesis and Intersecting Pathways

    Ben Chaabane, S., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 79 p.

    Research output: Book/ReportPh.D. thesisResearch

  46. Published

    MicroProteins: small size - big impact

    qmd783, qmd783, Straub, D., Graeff, M. & Wenkel, Stephan, 2015, In: Trends in Plant Science. 20, 8, p. 477–482 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    Multiple hydroxyphenethyl glucosinolate isomers and their tandem mass spectrometric destinction in a geographically structured polymorphism in the crucifer Barbarea vulgaris

    Agerbirk, Niels, Olsen, C. E., Heimes, C., Christensen, S., Bak, Søren & Hauser, T. P., 2015, In: Phytochemistry. 115, p. 130-142 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    NMR characterization of chemically synthesized branched alpha-dextrin model compounds

    Petersen, B. O., Motawie, Mohammed Saddik, Møller, Birger Lindberg, Hindsgaul, O. & Meier, S., 2015, In: Carbohydrate Research. 403, p. 149-156 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Nanodisc films for membrane protein studies by neutron reflection: effect of the protein scaffold choice

    Bertram, N., Laursen, Tomas, Barker, R., Bavishi, K., Møller, Birger Lindberg & Cardenas Gomez, M., 2015, In: Langmuir. 31, 30, p. 8386-8391 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    PUB22 and PUB23 U-BOX E3 ligases directly ubiquitinate RPN6, a 26S proteasome lid subunit, for subsequent degradation in Arabidopsis thaliana

    Cho, S. K., Bae, H., Ryu, M., Yang, S. W. & Kim, W. T., 2015, In: Biochemical and Biophysical Research Communications. 464, 4, p. 994-999 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  51. Published

    Plasticity of specialized metabolism as mediated by dynamic metabolons

    Laursen, Tomas, Møller, Birger Lindberg & Bassard, J. A., 2015, In: Trends in Plant Science. 20, 1, p. 20-32 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. Published

    Scent emission profiles from Darwin's orchid - Angraecum sesquipedale: investigation of the aldoxime metabolism using clustering analysis

    Nielsen, L. J. & Møller, Birger Lindberg, 2015, In: Phytochemistry. 120, p. 3-18 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

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