Section for Plant Biochemistry

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  1. 2014
  2. Published

    Multiplexed microRNA detection using lanthanide-labeled DNA probes and laser ablation inductively coupled plasma mass spectrometry

    de Bang, T. C., Shah, P., Cho, S. K., Yang, S. W. & Husted, Søren, 2014, In: Analytical Chemistry. 86, 14, p. 6823-6826 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Consequences of combined herbivore feeding and pathogen infection for fitness of Barbera vulgaris plants

    van Mölken, T., Poulsen, V. K., Jensen, Karen Rysbjerg, Olsen, C. E., Sundelin, T., Dam, N. M. V. & Hauser, T. P., 2014, In: Oecologia. 175, 2, p. 589-600 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. 2015
  5. Published

    Derivatization of isothiocyanates and their reactive adducts for chromatographic analysis

    Agerbirk, Niels, De Nicola, G. R., Olsen, C. E., Mueller, C. & Iori, R., 2015, In: Phytochemistry. 118, p. 109-115 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Glucosinolate hydrolysis products in the crucifer Barbarea vulgaris include a thiazolidine-2-one from a specific phenolic isomer as well as oxazolidine-2-thiones

    Agerbirk, Niels & Olsen, C. E., 2015, In: Phytochemistry. 115, p. 143-151 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Multiple hydroxyphenethyl glucosinolate isomers and their tandem mass spectrometric destinction in a geographically structured polymorphism in the crucifer Barbarea vulgaris

    Agerbirk, Niels, Olsen, C. E., Heimes, C., Christensen, S., Bak, Søren & Hauser, T. P., 2015, In: Phytochemistry. 115, p. 130-142 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Characterization of Genes Involved in Sesquiterpenoid Biosynthesis from Thapsia garganica and Thapsia laciniata

    Andersen, T. B., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 223 p.

    Research output: Book/Report › Ph.D. thesis › Research

  9. Published

    Thapsigargin - from Thapsia L. to Mipsagargin

    Andersen, T. B., Quinonero Lopez, C., Manczak, T., Martinez, K. A. & Simonsen, H. T., 2015, In: Molecules. 20, 4, p. 6113-6127 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    MiRNA Biogenesis and Intersecting Pathways

    Ben Chaabane, S., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 79 p.

    Research output: Book/Report › Ph.D. thesis › Research

  11. Published

    Nanodisc films for membrane protein studies by neutron reflection: effect of the protein scaffold choice

    Bertram, N., Laursen, Tomas, Barker, R., Bavishi, K., Møller, Birger Lindberg & Cardenas Gomez, M., 2015, In: Langmuir. 31, 30, p. 8386-8391 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Stable heterologous expression of biologically active terpenoids in green plant cells

    Binti Khairul Ikram, N. K., Zhan, X., Pan, X., King, B. C. & Simonsen, H. T., 2015, In: Frontiers in Plant Science. 6, 10 p., 129.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    CYP76C1 (Cytochrome P450)-mediated linalool metabolism and the formation of volatile and soluble linalool oxides in Arabidopsis flowers: a strategy for defense against floral antagonists

    Boachon, B., Junker, R. R., Miesch, L., Bassard, J. A., Höfer, R., Caillieaudeaux, R., Seidel, D. E., Lesot, A., Heinrich, C., Ginglinger, J., Allouche, L., Vincent, B., Wahyuni, D. S. C., Paetz, C., Beran, F., Miesch, M., Schneider, B., Leiss, K. & Werck-Reichhart, D., 2015, In: The Plant Cell. 27, 10, p. 2972-2990 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Large-scale phenomics identifies primary and fine-tuning roles for CRKs in responses related to oxidative stress

    Bourdais, G., Burdiak, P., Gauthier, A., Nitsch, L., Salojärvi, J., Rayapuram, C., Idänheimo, N., Hunter, K., Kimura, S., Merilo, E., Vaattovaara, A., Oracz, K., Kaufholdt, D., Pallon, A., Anggoro, D. T., Glów, D., Lowe, J., Zhou, J., Mohammadi, O., Puukko, T. & 13 others, Albert, A., Lang, H., Ernst, D., Kollist, H., Brosché, M., Durner, J., Borst, J. W., Collinge, David B., Karpinski, S., Lyngkjær, M. F., Robatzek, S., Wrzaczek, M. & Kangasjärvi, J., 2015, In: P L o S Genetics. 11, 7, 36 p., e1005373.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    PUB22 and PUB23 U-BOX E3 ligases directly ubiquitinate RPN6, a 26S proteasome lid subunit, for subsequent degradation in Arabidopsis thaliana

    Cho, S. K., Bae, H., Ryu, M., Yang, S. W. & Kim, W. T., 2015, In: Biochemical and Biophysical Research Communications. 464, 4, p. 994-999 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    The bifurcation of the cyanogenic glucoside and glucosinolate biosynthetic pathways

    Sørensen, Mette, Kannangara, R. M., Olsen, C. E., Blomstedt, C. K., Gleadow, R. M., Jørgensen, Kirsten, Bak, Søren, Motawie, Mohammed Saddik & Møller, Birger Lindberg, 2015, In: The Plant Journal. 84, 3, p. 558-573 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Deciphering mineral homeostasis in barley seed transfer cells at transcriptional level

    Darbani Shirvanehdeh, B., Noeparvar, S. & Borg, S., 2015, In: PLoS ONE. 10, 11, 26 p., e0141398.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    How does garlic mustard lure and kill the west virginia white butterfly?

    Davis, S. L., Frisch, T., Bjarnholt, Nanna & Cipollini, D., 2015, In: Journal of Chemical Ecology. 41, 10, p. 948-955 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Chemo- and regioselective functionalization of nortrilobolide: application for semi-synthesis of the natural product 2-acetoxytrilobolide

    Doan, T. Q. N., Crestey, F., Olsen, C. E. & Christensen, Søren Brøgger, 2015, In: Journal of Natural Products. 78, 6, p. 1406-1414

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Evolution of substrate recognition sites (SRSs) in cytochromes P450 from Apiaceae exemplified by the CYP71AJ subfamily

    Dueholm, B., Krieger, C., Drew, D. P., Olry, A., Kamo, T., Taboureau, O., Weitzel, C., Bourgaud, F., Hehn, A. & Simonsen, H. T., 2015, In: BMC Evolutionary Biology. 15, 14 p., 122.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    MicroProteins: small size - big impact

    qmd783, qmd783, Straub, D., Graeff, M. & Wenkel, Stephan, 2015, In: Trends in Plant Science. 20, 8, p. 477–482 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Metabolic engineering of Synechocystis sp. PCC 6803 for production of the plant diterpenoid manoyl oxide

    Englund, E., Andersen-Ranberg, Johan, Miao, R., Hamberger, B. R. & Lindberg, P., 2015, In: A C S Synthetic Biology. 4, 12, p. 1270-1278 9 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  23. Published

    Global medicinal uses of Euphorbia L. (Euphorbiaceae)

    Ernst, M., Grace, O. M., Saslis Lagoudakis, H., Nilsson, N., Simonsen, H. T. & Rønsted, Nina, 2015, In: Journal of Ethnopharmacology. 176, p. 90-101 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Diversified glucosinolate metabolism: biosynthesis of hydrogen cyanide and of the hydroxynitrile glucoside alliarinoside in relation to sinigrin metabolism in Alliaria petiolata

    Frisch, T., Motawie, Mohammed Saddik, Olsen, C. E., Agerbirk, Niels, Møller, Birger Lindberg & Bjarnholt, Nanna, 2015, In: Frontiers in Plant Science. 6, 16 p., 926.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Vanillin-bioconversion and bioengineering of the most popular plant flavor and its De Novo biosynthesis in the vanilla orchid

    Gallage, N. J. & Møller, Birger Lindberg, 2015, In: Molecular Plant. 8, 1, p. 40-57 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Heterologous expression of the isopimaric acid pathway in Nicotiana benthamiana and the effect of N-terminal modifications of the involved cytochrome P450 enzyme

    Gnanasekaran, Thiyagarajan, Vavitsas, K., Andersen-Ranberg, Johan, Nielsen, A. J. Z., Olsen, C. E., Hamberger, B. R. & Jensen, Poul Erik, 2015, In: Journal of Biological Engineering. 9, 10 p., 24.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Glycoproteomic analysis of seven major allergenic proteins reveals novel post-translational modifications

    Halim, Adnan, Carlsson, M. C., Mathiesen, C. B. K., Brand, S., Möller, S. R., Olsen, C. E., Vakhrushev, Sergey, Brimnes, J., Wurtzen, P. A., Ipsen, H., Petersen, Bent L & Wandall, Hans H., 2015, In: Molecular and Cellular Proteomics. 14, 1, p. 191-204 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Genome-wide association study of production and stability traits in barley cultivated under future climate scenarios

    Ingvordsen, C. H., Backes, G., Lyngkjær, M. F., Peltonen-Sainio, P., Jahoor, A., Mikkelsen, T. N. & Jørgensen, R. B., 2015, In: Molecular Breeding. 35, 14 p., 84.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Significant decrease in yield under future climate conditions: stability and production of 138 spring barley accessions

    Ingvordsen, C. H., Backes, G., Lyngkjær, M. F., Peltonen-Sainio, P., Jensen, J. D., Jalli, M., Jahoor, A., Rasmussen, M., Mikkelsen, T. N., Stockmarr, A. & Bagger Jørgensen, R., 2015, In: European Journal of Agronomy. 63, p. 105-113 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Cesium toxicity alters MicroRNA processing and AGO1 expressions in Arabidopsis thaliana

    Jung, I. L., Ryu, M., Cho, S. K., Shah, P., Lee, J. H., Bae, H., Kim, I. G. & Yang, S. W., 2015, In: P L o S One. 10, 5, 17 p., e0125514.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    A functional EXXEK motif is essential for proton coupling and active glucosinolate transport by NPF2.11

    Jørgensen, M. E., Olsen, C. E., Geiger, D., Mirza, Osman Asghar, Halkier, Barbara Ann & Nour-Eldin, Hussam Hassan, 2015, In: Plant and Cell Physiology. 56, 12, p. 2340-2350 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    DESI-MS imaging of metabolites in various plant materials – a matter of sample preparation

    Kato, L., Rook, F., Møller, Birger Lindberg, Hansen, S. H. & Janfelt, Christian, 2015.

    Research output: Contribution to conference › Poster › Research

  33. Published

    Discovery of a P450-catalyzed step in vindoline biosynthesis: a link between the aspidosperma and eburnamine alkaloids

    Kellner, F., Geu-Flores, Fernando, Sherden, N. H., Brown, S., Foureau, E., Courdavault, V. & O'Connor, S. E., 2015, In: Chemical Communications. 51, 36, p. 7626-7628 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Identification and genome organization of saponin pathway genes from a wild crucifer, and their use for transient production of saponins in Nicotiana benthamiana

    Khakimov, Bekzod, Poulsen, V. K., Erthmann, P. Ø., Fukushima, E. O., Augustin, J. M., Olsen, C. E., Scholtalbers, J., Volpin, H., Andersen, S. B., Hauser, T. P., Muranaka, T. & Bak, Søren, 2015, In: The Plant Journal. 84, 3, p. 478-490 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Lotus japonicus flowers are defended by a cyanogenic β-glucosidase with highly restricted expression to essential reproductive organs

    Lai, D., Picmanova, M., Hachem, M. A., Motawie, Mohammed Saddik, Olsen, C. E., Møller, Birger Lindberg, Rook, F. & Takos, A. M., 2015, In: Plant Molecular Biology. 89, 1-2, p. 21-34 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Plasticity of specialized metabolism as mediated by dynamic metabolons

    Laursen, Tomas, Møller, Birger Lindberg & Bassard, J. A., 2015, In: Trends in Plant Science. 20, 1, p. 20-32 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Iminolactones from Schizophyllum commune

    Liu, X., Frydenvang, Karla Andrea, Liu, H., Zhai, L., Chen, M., Olsen, C. E. & Christensen, Søren Brøgger, 2015, In: Journal of Natural Products. 78, 5, p. 1165-1168 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Cu(I)-catalyzed efficient synthesis of 2′-Triazolo-nucleoside conjugates

    Mathur, D., Rana, N., Olsen, C. E., Parmar, V. S. & Prasad, A. K., 2015, In: Journal of Heterocyclic Chemistry. 52, 3, p. 701-710 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Accumulation of secondary metabolites in healthy and diseased barley, grown under future climate levels of CO2, ozone and temperature

    Mikkelsen, B. L., Olsen, C. E. & Lyngkjær, M. F., 2015, In: Phytochemistry. 118, p. 162-173 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Complex interplay of future climate levels of CO2, ozone and temperature on susceptibility to fungal diseases in barley

    Mikkelsen, B. L., Bagger Jørgensen, R. & Lyngkjær, M. F., 2015, In: Plant Pathology. 64, 2, p. 319-327 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Taste detection of the non-volatile isothiocyanate moringin results in deterrence to glucosinolate-adapted insect larvae

    Müller, C., van Loon, J., Ruschioni, S., De Nicola, G. R., Olsen, C. E., Iori, R. & Agerbirk, Niels, 2015, In: Phytochemistry. 118, p. 139-148 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Acetylation of cell wall is required for structural integrity of the leaf surface and exerts a global impact on plant stress responses

    Nafisi, M., Stranne, M., Fimognari, L., Atwell, S., Martens, Helle Jakobe, Pedas, P. R., Hansen, S. F., Nawrath, C., Scheller, H. V., Kliebenstein, D. J. & Sakuragi, Y., 2015, In: Frontiers in Plant Science. 6, 13 p., 550.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Interplays between the cell wall and phytohormones in interaction between plants and necrotrophic pathogens

    Nafisi, M., Fimognari, L. & Sakuragi, Y., 2015, In: Phytochemistry. 112, p. 63-71 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Utilization of a high-throughput shoot imaging system to examine the dynamic phenotypic responses of a C4 cereal crop plant to nitrogen and water deficiency over time

    Neilson, Elizabeth Heather Jakobsen, Edwards, A. M., Blomstedt, C. K., Berger, B., Møller, Birger Lindberg & Gleadow, R. M., 2015, In: Journal of Experimental Botany. 66, 7, 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Metabolism of the Cyanogenic Glucoside Dhurrin in Sorghum bicolor L. (Moench)

    Nielsen, L. J., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 151 p.

    Research output: Book/Report › Ph.D. thesis › Research

  46. Published

    Scent emission profiles from Darwin's orchid - Angraecum sesquipedale: investigation of the aldoxime metabolism using clustering analysis

    Nielsen, L. J. & Møller, Birger Lindberg, 2015, In: Phytochemistry. 120, p. 3-18 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Assembly of highly standardized gene fragments for high-level production of porphyrins in E. coli

    Nielsen, M. T., Madsen, K. M., Seppälä, S., Riisberg, L., Harrison, S. J., Møller, Birger Lindberg & Nørholm, M. H. H., 2015, In: A C S Synthetic Biology. 4, 3, p. 274-282 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Eco-efficient production of spring barley in a changed climate: A Life Cycle Assessment including primary data from future climate scenarios

    Niero, M., Ingvordsen, C. H., Peltonen-Sainio, P., Jalli, M., Lyngkjær, M. F., Hauschild, M. Z. & Jørgensen, R. B., 2015, In: Agricultural Systems. 136, p. 46-60 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Sclareol production in the moss Physcomitrella patens and observations on growth and terpenoid biosynthesis

    Pan, X., Han, L., Zhang, Y., Chen, D. & Simonsen, H. T., 22 May 2015, In: Plant Biotechnology Reports. 9, 3, p. 149-159 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Cytochromes P450 for terpene functionalisation and metabolic engineering

    Pateraki, Irini, Heskes, A. M. & Hamberger, B. R., 2015, Biotechnology of Isoprenoids. Springer, p. 107-139 33 p. (Advances in Biochemical Engineering. Biotechnology, Vol. 148).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  51. Published

    Standards for plant synthetic biology: a common syntax for exchange of DNA parts

    Patron, N. J., Orzaez, D., Marillonnet, S., Warzecha, H., Matthewman, C., Youles, M., Raitskin, O., Leveau, A., Farré, G., Rogers, C., Smith, A., Hibberd, J., Webb, A. A. R., Locke, J., Schornack, S., Ajioka, J., Baulcombe, D. C., Zipfel, C., Kamoun, S., Jones, J. D. G. & 38 others, Kuhn, H., Robatzek, S., Van Esse, H. P., Sanders, D., Oldroyd, G., Martin, C., Field, R., O'Connor, S., Fox, S., Wulff, B., Miller, B., Breakspear, A., Radhakrishnan, G., Delaux, P., Loqué, D., Granell, A., Tissier, A., Shih, P., Brutnell, T. P., Quick, W. P., Rischer, H., Fraser, P. D., Aharoni, A., Raines, C., South, P. F., Ané, J., Hamberger, B. R., Langdale, J., Stougaard, J., Bouwmeester, H., Udvardi, M., Murray, J. A. H., Ntoukakis, V., Schäfer, P., Denby, K., Edwards, K. J., Osbourn, A. & Haseloff, J., 2015, In: New Phytologist. 208, 1, p. 13-19 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Metabolism, excretion and avoidance of cyanogenic glucosides in insects with different feeding specialisations

    Pentzold, S., Zagrobelny, Mika, Bjarnholt, Nanna, Kroymann, J., Vogel, H., Olsen, C. E., Møller, Birger Lindberg & Bak, Søren, 2015, In: Insect Biochemistry and Molecular Biology. 66, p. 119-128 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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