Section for Plant Biochemistry

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  1. 2023
  2. Published

    Identification of new PTP1B-inhibiting decipiene diterpenoid esters from Eremophila clarkei by high-resolution PTP1B inhibition profiling, enzyme kinetics analysis, and molecular docking

    Liang, Chao, Zang, J., Ndi, C., Semple, S., Buirchell, B., Coriani, S., Møller, Birger Lindberg & Stærk, Dan, 2023, In: Bioorganic Chemistry. 139, 15 p., 106744.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Species-specific dynamics of specialized metabolism in germinating sorghum grain revealed by temporal and tissue-resolved transcriptomics and metabolomics

    Liu, H., Micic, Nikola, Miller, Sara, Crocoll, C. & Bjarnholt, Nanna, 2023, In: Plant Physiology and Biochemistry. 196, p. 807-820 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Leaves of Cannabis sativa and their trichomes studied by DESI and MALDI mass spectrometry imaging for their contents of cannabinoids and flavonoids

    Lorensen, Marcus Daniel B B, Hayat, S. Y., Wellner, N., Bjarnholt, Nanna & Janfelt, Christian, 2023, In: Phytochemical Analysis. 34, 3, p. 269-279

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Spatial localization of monoterpenoid indole alkaloids in Rauvolfia tetraphylla by high resolution mass spectrometry imaging

    Lorensen, Marcus Daniel B B, Bjarnholt, Nanna, St-Pierre, B., Heinicke, S., Courdavault, V., O'Connor, S. & Janfelt, Christian, 2023, In: Phytochemistry. 209, 15 p., 113620.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Pathway Discovery and Engineering of Quinolizidine Alkaloid Biosynthesis in Narrow-Leafed Lupin

    Mancinotti, Davide, 2023, 172 p.

    Research output: Book/Report › Ph.D. thesis › Research

  7. Published

    The causal mutation leading to sweetness in modern white lupin cultivars

    Mancinotti, Davide, Czepiel, K., Taylor, J. L., Galehshahi, H. G., Møller, L. A., Jensen, M. K., Motawie, Mohammed Saddik, Hufnagel, B., Soriano, A., Yeheyis, L., Kjaerulff, Louise, Péret, B., Stærk, Dan, Wendt, T., Nelson, M. N., Kroc, M. & Geu-Flores, Fernando, 2023, In: Science Advances. 9, 31, 10 p., eadg8866.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Exploiting photosynthesis-driven P450 activity to produce indican in tobacco chloroplasts

    Mellor, Silas Busck, Behrendorff, J. B. Y. H., Ipsen, J. O., Crocoll, C., Laursen, Tomas, Gillam, E. M. J. & Pribil, Mathias, 2023, In: Frontiers in Plant Science. 13, 17 p., 1049177.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    New meets old - glutathione conjugates and mass spectrometry imaging as tools for exploring plant glutathione transferases

    Micic, Nikola, 2023, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 147 p.

    Research output: Book/Report › Ph.D. thesis › Research

  10. Published

    New methods for sorghum transformation in temperate climates

    Miller, Sara, Rønager, Asta Holmelund, Holm, R., Fontanet-Manzaneque, J. B., Caño-Delgado, A. I. & Bjarnholt, Nanna, 2023, In: AoB PLANTS. 15, 3, 14 p., plad030.

    Research output: Contribution to journal › Review › Research › peer-review

  11. Published

    Overexpression of Physcomitrium patens cell cycle regulators leads to larger gametophytes

    Peramuna, A., López, C. Q., Rios, F. J. A., Bae, H., Fangel, J. U., Batth, R., Harholt, J. & Simonsen, H. T., 2023, In: Scientific Reports. 13, 1, 10 p., 4301.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Systematic engineering pinpoints a versatile strategy for the expression of functional cytochrome P450 enzymes in Escherichia coli cell factories

    Poborsky, Michal, Crocoll, C., Motawie, Mohammed Saddik & Halkier, Barbara Ann, 2023, In: Microbial Cell Factories. 22, 10 p., 219.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Novel transformation strategies improve efficiency up to 10-fold in stramenopile algae

    Poveda Huertes, Daniel, Patwari, P., Günther, Jan, Fabris, M. & Andersen-Ranberg, Johan, 2023, In: Algal Research. 74, 11 p., 103165.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    A glycoside-specific glycosyltransferase transfers apiose to flavonoid glucosides in celery

    Straube, Henryk, 2023, In: Plant Physiology. 193, 3, p. 1715-1717 3 p.

    Research output: Contribution to journal › Comment/debate › Research

  15. Published

    Am-aza-ing antidiabetic: Mulberry dehydrogenase MnGUTB1 contributes to the biosynthesis of 1-deoxynojirimycin

    Straube, Henryk, 2023, In: Plant Physiology. 192, 2, p. 700-702 3 p.

    Research output: Contribution to journal › Editorial › Research › peer-review

  16. Published

    Peeling back the layers: Unveiling the biochemistry of health-promoting molecules in orange fruits

    Straube, Henryk, 2023, In: Plant Physiology. 192, 4, 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Rooted in chemistry: 2 secoiridoid glucosides promoting fungal symbiosis

    Straube, Henryk, 2023, In: Plant Physiology. 193, 4, p. 2257-2259

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Self-devouring for survival: The influence of tissue-specific autophagy on seeds

    Straube, Henryk, 2023, In: Plant Physiology. 193, p. 166-168

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Secondary Metabolites with Anti-Inflammatory Activity from Laurencia majuscula Collected in the Red Sea

    Tammam, M. A., Daskalaki, M. G. G., Tsoureas, N., Kolliniati, O., Mahdy, A., Kampranis, Sotirios, Tsatsanis, C., Roussis, V. & Ioannou, E., 2023, In: Marine Drugs. 21, 2, 15 p., 79.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    New genes on the block: Neofunctionalization of tandem duplicate genes with putative new functions in Arabidopsis

    Ugalde, J. M. & Straube, Henryk, 2023, In: Plant Physiology. 192, 4, p. 2574-2576 3 p., 271.

    Research output: Contribution to journal › Editorial › Research › peer-review

  21. Published

    An improved Nicotiana benthamiana bioproduction chassis provides novel insights into nicotine biosynthesis

    Vollheyde, K., Dudley, Q. M., Yang, T., Oz, M. T., Mancinotti, Davide, Fedi, M. O., Heavens, D., Linsmith, G., Chhetry, M., Smedley, M. A., Harwood, W. A., Swarbreck, D., Geu-Flores, Fernando & Patron, N. J., 2023, In: New Phytologist. 240, 1, p. 302-317 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Structure of SALL4 zinc finger domain reveals link between AT-rich DNA binding and Okihiro syndrome

    Watson, J. A., Pantier, R., Jayachandran, U., Chhatbar, K., Alexander-Howden, B., Kruusvee, Valdeko, Prendecki, M., Bird, A. & Cook, A. G., 2023, In: Life Science Alliance. 6, 3, 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Studies on the biosynthesis of natural products in faba bean

    Xia, Xinxing, 2023, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 79 p.

    Research output: Book/Report › Ph.D. thesis › Research

  24. Published

    Biosynthesis and biotechnological production of the anti-obesity agent celastrol

    Zhao, Yong, Hansen, N. L., Duan, Yaotao, Prasad, M., Motawie, Mohammed Saddik, Møller, Birger Lindberg, Pateraki, Irini, Stærk, Dan, Bak, Søren, Miettinen, Karel & Kampranis, Sotirios, 2023, In: Nature Chemistry. 15, p. 1236–1246

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Orthogonal reversed-phase C18 and pentafluorophenyl HPLC separation for phytochemical profiling of serrulatanes in Eremophila denticulata

    Zhao, Yong, Li, T., Kjaerulff, Louise, Venter, H., Coriani, S., Møller, Birger Lindberg, Semple, S. & Stærk, Dan, 2023, In: Journal of Natural Products. 86, 12, p. 2638-2650

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Polypharmacology-labeled molecular networking: An analytical technology workflow for accelerated identification of multiple bioactive constituents in complex extracts

    Zhao, Yong, Gericke, Oliver, Li, T., Kjaerulff, Louise, Kongstad, Kenneth Thermann, Heskes, A. M., Møller, Birger Lindberg, Jørgensen, Flemming Steen, Venter, H., Coriani, S., Semple, S. J. & Stærk, Dan, 2023, In: Analytical Chemistry. 95, 9, p. 4381-4389 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    High-amylose starch: Structure, functionality and applications

    Zhong, Yuyue, Tai, L., Blennow, Andreas, Ding, Li, Herburger, K., Qu, J., Xin, Anzhou, Guo, D., Hebelstrup, K. H. & Liu, X., 2023, In: Critical Reviews in Food Science and Nutrition. 63, 27, p. 8568-8590 23 p.

    Research output: Contribution to journal › Review › Research › peer-review

  28. 2024
  29. Published

    "Seeing" the electromagnetic spectrum: spotlight on the cryptochrome photocycle

    Aguida, B., Babo, J., Baouz, S., Jourdan, N., Procopio, M., El-Esawi, M. A., Engle, D., Mills, S., Wenkel, Stephan, Huck, A., Berg-Sørensen, K., Kampranis, Sotirios, Link, J. & Ahmad, M., 2024, In: Frontiers in Plant Science. 15, 20 p., 1340304.

    Research output: Contribution to journal › Review › Research › peer-review

  30. Published

    Ratiometric gibberellin biosensors for the analysis of signaling dynamics and metabolism in plant protoplasts

    Andres, J., Schmunk, L. J., Grau-Enguix, F., Braguy, J., Samodelov, S. L., Blomeier, T., Ochoa-Fernandez, R., Weber, W., Al-Babili, S., Alabadí, D., Blázquez, M. A. & Zurbriggen, M. D., 2024, In: Plant Journal. 118, 4, p. 927-939 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Identification of nitric oxide mediated defense signaling and its microRNA mediated regulation during Phytophthora capsici infection in black pepper

    Asha, S., Kattupalli, D., Vijayanathan, Mallika & Soniya, E. V., 2024, In: Physiology and Molecular Biology of Plants. 30, p. 33-47 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Biosynthesis of chlorophyll c in a dinoflagellate and heterologous production in planta

    Jinkerson, R. E., Poveda Huertes, Daniel, Cooney, E. C., Cho, A., Ochoa-Fernandez, R., Keeling, P. J., Xiang, T. & Andersen-Ranberg, Johan, 2024, In: Current Biology. 34, 3, p. 594-605.e4 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. E-pub ahead of print

    Disentangling hydroxynitrile glucoside biosynthesis in a barley (Hordeum vulgare) metabolon provides access to elite malting barleys for ethyl carbamate-free whisky production

    Jørgensen, M. E., Houston, K., Jørgensen, Hans Jørgen Lyngs, Thomsen, H. C., Tekaat, L., Krogh, C. T., Mellor, Silas Busck, Braune, K. B., Damm, M. L., Pedas, P. R., Voss, C., Rasmussen, M. W., Nielsen, K., Skadhauge, B., Motawie, Mohammed Saddik, Møller, Birger Lindberg, Dockter, C. & Sørensen, Mette, 23 Apr 2024, (E-pub ahead of print) In: Plant Journal.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Integrative transcript to proteome analysis of barley during Ramularia collo-cygni leaf spot development identified several proteins that are related to fungal recognition and infection responses

    Lemcke, René, Kamble, M., Schneider, S., Lyngkjær, M. F., Radutoiu, S. & Wienkoop, S., 2024, In: Frontiers in Plant Science. 15, 10 p., 1367271.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Eremane, viscidane and isozizaene diterpenoids from the leaves of Eremophila rigida and their absolute configurations

    Liang, Chao, Ndi, C., Semple, S., Buirchell, B., Coriani, S., Møller, Birger Lindberg & Stærk, Dan, 2024, In: Phytochemistry. 219, 16 p., 113972.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Identification of Clubroot-Resistant Germplasm in a Radish (Raphanus sativus L.) Core Collection

    Ma, Y., Wang, H., Song, J., Yang, W., Jia, H., Agerbirk, Niels, Chen, Y., Li, C., Piao, Y., Li, S. & Zhang, X., 2024, In: Agronomy. 14, 1, 12 p., 157.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Exploring the genetic architecture of specialized metabolism in Arabidopsis seeds

    Straube, Henryk, 2024, In: Plant Physiology. p. 1266-1267 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Triterpene tales: Two genes involved in Nicotiana attenuata herbivore defense

    Straube, Henryk, 2024, In: Plant Physiology. 194, 4, p. 2191-2193 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. E-pub ahead of print

    Site-directed genotype screening for elimination of antinutritional saponins in quinoa seeds identifies TSARL1 as a master controller of saponin biosynthesis selectively in seeds

    Trinh, Mai Duy Luu, Visintainer, Davide, Günther, Jan, Østerberg, J. T., Rodrigues da Fonseca, Rute Andreia, Fondevilla, S., Moog, Max William, Luo, Guangbin, Nørrevang, Anton Frisgaard, Crocoll, C., Nielsen, P. V., Jacobsen, S., Wendt, T., Bak, Søren, Lopez Marques, Rosa Laura & Palmgren, Michael, 2024, (E-pub ahead of print) In: Plant Biotechnology Journal. 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. E-pub ahead of print

    ABI5 binding proteins: key players in coordinating plant growth and development

    Vittozzi, Y., Krüger, T., Majee, A., Née, G. & Wenkel, Stephan, 2024, (E-pub ahead of print) In: Trends in Plant Science.

    Research output: Contribution to journal › Review › Research › peer-review

  41. Published

    Whole-cell biocatalytic synthesis of terpenoids bypasses the isoprene rule

    Wang, Lina, 2024, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 132 p.

    Research output: Book/Report › Ph.D. thesis › Research

  42. Published

    Oxetane ring formation in taxol biosynthesis is catalyzed by a bifunctional cytochrome P450 enzyme

    Zhao, Yong, zpm303, zpm303, Xie, Yuman, Duan, Y. T., Andeadelli, A., Pateraki, Irini, Makris, A. M., Pomorski, Thomas Guenther, Stærk, Dan & Kampranis, Sotirios, 2024, In: Journal of the American Chemical Society. 146, p. 801-810

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Essentials in the acquisition, interpretation, and reporting of plant metabolite profiles

    Çiçek, S. S., Mangoni, A., Hanschen, F. S., Agerbirk, Niels & Zidorn, C., 2024, In: Phytochemistry. 220, 16 p., 114004.

    Research output: Contribution to journal › Review › Research › peer-review

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