Microbial Ecology and Biotechnology

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  1. 2021
  2. Published

    Co-effect of cadmium and iron oxide nanoparticles on plasmid-mediated conjugative transfer of antibiotic resistance genes: [incl. Corrigendum]

    Pu, Q., Fan, X. T., Sun, A. Q., Pan, T., Li, H., Lassen, Simon Bo, An, X. L. & Su, J. Q., 2021, In: Environment International. 152, 9 p., 106453.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Complete Genome Sequence of Paenibacillus sp. Strain 37, a Plant Growth-Promoting Bacterium Isolated from the Rhizosphere of Abies nordmanniana (Nordmann Fir)

    Garcia-Lemos, A. M., Hennessy, Rosanna Catherine, Nielsen, Tue Kjærgaard, Hansen, Lars Hestbjerg & Nicolaisen, Mette Haubjerg, 2021, In: Microbiology Resource Announcements. 10, 8, 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Complete Genome Sequence of a Novel Dyadobacter sp. Strain, NIV53, Isolated from 2-Meter Deep Subsurface Sediment

    Bak, Frederik, Henriksen, Alexander Pil, Nielsen, Tue Kjærgaard & Nicolaisen, Mette Haubjerg, 2021, In: Microbiology resource announcements. 10, 44, 2 p., e0075421.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Complete Genome Sequence of the Cytokinin-Producing Biocontrol Strain Pseudomonas fluorescens G20-18

    Nielsen, Tue Kjærgaard, Mekureyaw, M. F., Hansen, Lars Hestbjerg, Nicolaisen, Mette Haubjerg, Roitsch, Thomas Georg & Hennessy, Rosanna Catherine, 2021, In: Microbiology Resource Announcements. 10, 30, 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Disentangling the abiotic and biotic components of AMF suppressive soils

    Cruz-Paredes, C., Diera, T., Davey, M., Rieckmann, Maria Monrad, Christensen, P., Dela Cruz, Majbrit, Laursen, Kristian Holst, Joner, E. J., Christensen, Jan H., Nybroe, O. & Jakobsen, Iver, 2021, In: Soil Biology and Biochemistry. 159, 11 p., 108305.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Earthworm gut: An overlooked niche for anaerobic ammonium oxidation in agricultural soil

    Li, H., Yang, X., Wang, J., Zhou, G., Zhang, Y., Lassen, Simon Bo, Zhu, Y. & Su, J., 2021, In: Science of the Total Environment. 752, 9 p., 141874.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Emergence and Co-selection of Antibiotic Resistance in the Environment

    Lassen, Simon Bo, 2021, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 243 p.

    Research output: Book/Report › Ph.D. thesis › Research

  9. Published

    Engraftment of strictly anaerobic oxygen-sensitive bacteria in irritable bowel syndrome patients following fecal microbiota transplantation does not improve symptoms

    Browne, Patrick Denis, Cold, F., Petersen, Andreas Munk, Halkjær, S. I., Christensen, A. H., Günther, S. & Hansen, Lars Hestbjerg, 2021, In: Gut Microbes. 13, 1, 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Enterococcus phage Nonaheksakonda infecting clinical isolates of Enterococcus faecalis represents a new lineage in the family Siphoviridae

    Olsen, Nikoline S., Nielsen, K. J., Plöger, M., Kot, Witold & Hansen, Lars Hestbjerg, 2021, In: Archives of Virology. 166, p. 593-599 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Epigenetic Memories: The Hidden Drivers of Bacterial Persistence?

    Riber, Leise & Hansen, Lars Hestbjerg, 2021, In: Trends in Microbiology. 29, 3, p. 190-194 5 p.

    Research output: Contribution to journal › Editorial › Research

  12. Published

    Evolutionary conserved nitric oxide synthesis proteins responding to bacterial MAMPs are located to the endoplasmic reticulum and are also involved in secondary metabolite synthesis and sterol production

    Zheng, W., Li, H., Ipcho, S., Fang, W., Hennessy, Rosanna Catherine, Hansen, B. Ø., Lu, G., Wang, Z., Newman, M. & Olsson, S., 2021, Cold Spring Harbor Laboratory, 43 p. (bioRxiv).

    Research output: Working paper › Preprint › Research

  13. Published

    Exposure to heavy metal and antibiotic enriches antibiotic resistant genes on the tire particles in soil

    Ding, J., Zhu, D., Wang, Y., Wang, H., Liang, A., Sun, H., Chen, Q., Lassen, Simon Bo, Lv, M. & Chen, L., 2021, In: Science of the Total Environment. 792, 9 p., 148417.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Extension of Plant Phenotypes by the Foliar Microbiome

    Hawkes, C. V., Kjøller, Rasmus, Raaijmakers, J. M., Riber, Leise, Christensen, Svend, Rasmussen, Simon, Christensen, Jan H., Dahl, A. B., Westergaard, Jesper Cairo, Nielsen, Mads, Brown-Guedira, G. & Hansen, Lars Hestbjerg, 2021, In: Annual Review of Plant Biology. 72, p. 823-846 24 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Functional Characterization of Type III-A CRISPR-Cas in a Clinical Human Methicillin-R Staphylococcus aureus Strain

    Yang, L., Mikkelsen, K., Grané, O. L. I., Wang, Z., Tang, Y., Jiao, X., Ingmer, Hanne, Høyland-Kroghsbo, Nina Molin & Li, Q., 2021, In: CRISPR Journal. 4, 5, p. 686-698

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Global transcriptome analysis of Rhizobium favelukesii LPU83 in response to acid stress

    Nilsson, J. F., Castellani, L. G., Draghi, W. O., Mogro, E. G., Wibberg, D., Winkler, A., Hansen, Lars Hestbjerg, Schluüter, A., Puühler, A., Kalinowski, J., Tejerizo, G. A. T. & Pistorio, M., 2021, In: FEMS Microbiology Ecology. 97, 1, fiaa235.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    High throughput in vitro characterization of pectins for pig(let) nutrition

    Wiese, M., Hui, Y., Holck, J., Sejberg, J. J. P., Daures, C., Maas, E., Kot, Witold, Borne, J. M., Khakimov, Bekzod, Thymann, Thomas & Nielsen, Dennis Sandris, 2021, In: BMC Animal Microbiome. 3, 15 p., 69.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Impaired skeletal muscle hypertrophy signaling and amino acid deprivation response in Apoe knockout mice with an unhealthy lipoprotein distribution

    Agergaard, J., Zillmer, M. C. F., Castro-Mejía, J. L., Mertz, K., Kot, Witold, Højfeldt, Grith Stougaard, van Hall, Gerrit, Nielsen, Dennis Sandris, Schjerling, Peter & Holm, Lars Morten, 2021, In: Scientific Reports. 11, 15 p., 16423.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Influence of Environmental Factors on Occurrence of Cyanobacteria and Abundance of Saxitoxin-Producing Cyanobacteria in a Subtropical Drinking Water Reservoir in Brazil

    Moraes, M. A. B., Rodrigues, R. A. M., Schlüter, L., Podduturi, Raju, Jørgensen, Niels O. G. & Calijuri, M. C., 2021, In: Water. 13, 12, p. 1716

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Inter-vendor variance of enteric eukaryotic DNA viruses in specific pathogen free C57BL/6N mice

    Rasmussen, Torben Sølbeck, Jakobsen, Rasmus Riemer, Castro-Mejía, J. L., Kot, Witold, Thomsen, Allan Randrup, Vogensen, Finn Kvist, Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2021, In: Research in Veterinary Science. 136, p. 1-5 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Isolate-Specific Effect of Entomopathogenic Endophytic Fungi on Population Growth of Two-Spotted Spider Mite (Tetranychus urticae Koch) and Levels of Steroidal Glycoalkaloids in Tomato

    Rasool, S., Cárdenas, Pablo D., Pattison, David, Jensen, Birgit & Meyling, Nicolai Vitt, 2021, In: Journal of Chemical Ecology. 47, 4-5, p. 476–488 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Lead Drives Complex Dynamics of a Conjugative Plasmid in a Bacterial Community

    Cyriaque, V., Madsen, Jonas Stenløkke, Fievez, L., Leroy, B., Hansen, Lars Hestbjerg, Bureau, F., Sørensen, Søren Johannes & Wattiez, R., 2021, In: Frontiers in Microbiology. 12, 14 p., 655903.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Metagenomic analysis of a keratin-degrading bacterial consortium provides insight into the keratinolytic mechanisms

    Kang, D., Huang, Y., Nesme, Joseph, Herschend, J., Jacquiod, S., Kot, Witold, Hansen, Lars Hestbjerg, Lange, L. & Sørensen, Søren Johannes, 2021, In: Science of the Total Environment. 761, 9 p., 143281.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Metaviromes Reveal the Dynamics of Pseudomonas Host-Specific Phages Cultured and Uncultured by Plaque Assay

    Alanin, K. W. S., Forero Junco, Laura Milena, Jørgensen, J. B., Nielsen, Tue Kjærgaard, Rasmussen, Morten Arendt, Kot, Witold & Hansen, Lars Hestbjerg, 2021, In: Viruses. 13, 6, 21 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Method for producing the sesquiterpene viridiflorol with a fungal enzyme

    Ntana, F., Collinge, David B., Hamberger, B. R., Bhat, W. W., Johnson, S. R., Jensen, Birgit & Jørgensen, Hans Jørgen Lyngs, 2021, IPC No. A61K-000/00, C12N-009/88, Patent No. WO2021050841-A2, 11 Sep 2020

    Research output: Patent

  26. Published

    Microbial water quality in pangasius and tilapia aquaculture systems in five regions of Bangladesh

    Islam, S. R., Ahsan, M. E., Haque, M. M., Razzak, M. A., Schlüter, L., Podduturi, Raju & Jørgensen, Niels O. G., 2021, In: Malaysian Journal of Microbiology. 17, 4, p. 435-451 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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