Microbial Ecology and Biotechnology

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  1. 2022
  2. Published

    The Bacillus cereus Strain EC9 Primes the Plant Immune System for Superior Biocontrol of Fusarium oxysporum

    Madriz Ordenana, Kenneth, Pazarlar, S., Jørgensen, Hans Jørgen Lyngs, Nielsen, Tue Kjærgaard, Zhang, Y., Nielsen, K. L., Hansen, Lars Hestbjerg & Thordal-Christensen, Hans, 2022, In: Plants. 11, 5, 19 p., 687.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    The Efficacy of Faecal Microbiota Transplant and Rectal Bacteriotherapy in Patients with Recurrent Clostridioides difficile Infection: A Retrospective Cohort Study.

    Svensson, C. K., Cold, F., Ribberholt, I., Zangenberg, M., Mirsepasi-Lauridsen, H. C., Petersen, Andreas Munk & Helms, Morten, 2022, In: Cells. 11, 20, 12 p., 3272.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    The cytokinin-producing plant beneficial bacterium Pseudomonas fluorescens G20-18 primes tomato (Solanum lycopersicum) for enhanced drought stress responses

    Mekureyaw, M. F., Pandey, Chandana, Hennessy, Rosanna Catherine, Nicolaisen, Mette Haubjerg, Liu, Fulai, Nybroe, O. & Roitsch, Thomas Georg, 2022, In: Journal of Plant Physiology. 270, 15 p., 153629.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    The fungal endophyte Penicillium olsonii ML37 reduces Fusarium head blight by local induced resistance in wheat spikes

    Rojas, E. C., Jensen, Birgit, Jørgensen, Hans Jørgen Lyngs, Latz, Meike, Esteban, P. & Collinge, David B., 2022, In: Journal of Fungi. 8, 4, 17 p., 345.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    The phytonutrient cinnamaldehyde limits intestinal inflammation and enteric parasite infection

    Zhu, L., Andersen-Civil, A. I. S., Myhill, L. J., Thamsborg, Stig Milan, Kot, Witold, Krych, Lukasz, Nielsen, Dennis Sandris, Blanchard, A. & Williams, Andrew Richard, 2022, In: Journal of Nutritional Biochemistry. 100, 10 p., 108887.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Thermal Endurance by a Hot-Spring-Dwelling Phylogenetic Relative of the Mesophilic Paracoccus

    Mondal, N., Roy, C., Chatterjee, S., Sarkar, J., Dutta, S., Bhattacharya, S., Chakraborty, R. & Ghosh, W., 2022, In: Microbiology Spectrum. 10, 6, 25 p., e0160622.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Transgenic approaches for plant disease control: Status and prospects 2021

    Collinge, David B. & Sarrocco, S., 2022, In: Plant Pathology. 71, 1, p. 207-225 19 p.

    Research output: Contribution to journal › Review › Research › peer-review

  9. Published

    Treatment of bowel diseases with Faecal Microbiota Transplantation

    Cold, F., 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 212 p.

    Research output: Book/Report › Ph.D. thesis › Research

  10. Published

    Volatiles produced by Streptomyces spp. delay rot in apples caused by Colletotrichum acutatum

    Jepsen, T., Jensen, Birgit & Jørgensen, Niels O. G., 2022, In: Current Research in Microbial Sciences. 3, 7 p., 100121.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. 2021
  12. Published

    The pangenome of the fungal pathogen Neonectria neomacrospora

    Nielsen, Knud Nor, Sirén, K., Petersen, Bent, Sicheritz-Pontén, Thomas, Gilbert, M Thomas P, Korneliussen, Thorfinn Sand & Hansen, Ole Kim, 12 Mar 2021, 30 p. (bioRxiv).

    Research output: Working paper › Preprint

  13. Published

    A Novel Auxiliary Agarolytic Pathway Expands Metabolic Versatility in the Agar-Degrading Marine Bacterium Colwellia echini A3T

    Pathiraja, D., Christiansen, L., Park, B., Schultz-Johansen, M., Bang, G., Stougaard, P. & Choi, I. G., 2021, In: Applied and Environmental Microbiology. 87, 12, 19 p., e00230-21.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    A non-antifungal rhizobacterium stimulates plant immunity to protect tomato and Kalanchoe against Fusarium oxysporum and wheat against Zymoseptoria tritici

    Madriz Ordenana, Kenneth, Pazarlar, Sercan, Jørgensen, Hans Jørgen Lyngs, Nielsen, Tue Kjærgaard, Nielsen, K. L., Zhang, Y. & Thordal-Christensen, Hans, 2021. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  15. Published

    A novel microcosm to identify inherently competitive microorganisms with the ability to mineralize phytate in solum

    Pittroff, S. M., Olsson, S., Doolette, A., Greiner, R., Richardson, A. E. & Nicolaisen, Mette Haubjerg, 2021, In: Soil Ecology Letters. 3, p. 367-382

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    A novel transcription factor UvCGBP1 regulates development and virulence of rice false smut fungus Ustilaginoidea virens

    Chen, X., Li, P., Liu, H., Chen, X., Huang, J., Luo, C., Li, G., Hsiang, T., Collinge, David B. & Zheng, L., 2021, In: Virulence. 12, 1, p. 1563-1579 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    A sesquiterpene synthase from the endophytic fungus Serendipita indica catalyzes formation of viridiflorol

    Ntana, F., Bhat, W. W., Johnson, S. R., Jørgensen, Hans Jørgen Lyngs, Collinge, David B., Jensen, Birgit & Hamberger, B., 2021, In: Biomolecules. 11, 6, 16 p., 898.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Administration of bovine milk oligosaccharide to weaning gnotobiotic mice inoculated with a simplified infant type microbiota

    Jakobsen, L. M. A., Sundekilde, U. K., Andersen, H. J., Kot, Witold, Mejia, J. L. C., Nielsen, Dennis Sandris, Hansen, Axel Kornerup & Bertram, H. C., 2021, In: Microorganisms. 9, 5, 1003.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    An Oligosaccharide Rich Diet Increases Akkermansia spp. Bacteria in the Equine Microbiota

    Lindenberg, F. C., Lützhøft, Ditte Olsen, Krych, Lukasz, Fielden, J., Kot, Witold, Frøkiær, Hanne, van Galen, G., Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2021, In: Frontiers in Microbiology. 12, 666039.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    An improved direct metamobilome approach increases the detection of larger-sized circular elements across kingdoms

    Alanin, K. W. S., Jørgensen, T. S., Browne, Patrick Denis, Petersen, Bent, Riber, Leise, Kot, Witold & Hansen, Lars Hestbjerg, 2021, In: Plasmid. 115, 11 p., 102576.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Antibiotic resistome in the livestock and aquaculture industries: Status and solutions

    Zhao, Y., Yang, Q. E., Zhou, X., Wang, F., Muurinen, J., Virta, M. P., Brandt, Kristian Koefoed & Zhu, Y., 2021, In: Critical Reviews in Environmental Science and Technology. 51, 19, p. 2159-2196 38 p.

    Research output: Contribution to journal › Review › Research › peer-review

  22. Published

    Application of wood ash leads to strong vertical gradients in soil pH changing prokaryotic community structure in forest top soil

    Bang-Andreasen, T., Peltre, M., Ellegaard-Jensen, L., Hansen, Lars Hestbjerg, Ingerslev, Morten, Rønn, Regin, Jacobsen, C. S. & Kjøller, Rasmus, 2021, In: Scientific Reports. 11, 10 p., 742.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Bacterial Chromosomes Under Changing Environmental Conditions: Editorial

    Glinkowska, M., Waldminghaus, T. & Riber, Leise, 2021, In: Frontiers in Microbiology. 12, 3 p., 633466.

    Research output: Contribution to journal › Editorial › Research

  24. Published

    Cadmium enhances conjugative plasmid transfer to a fresh water microbial community

    Pu, Q., Fan, X., Li, H., An, X., Lassen, Simon Bo & Su, J., 2021, In: Environmental Pollution. 268, Part B, 9 p., 115903.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Case study on depuration of RAS-produced pikeperch (Sander lucioperca) for removal of geosmin and other volatile organic compounds (VOCs) and its impact on sensory quality

    Podduturi, Raju, Petersen, Mikael Agerlin, Vestergaard, M., Hyldig, G. & Jørgensen, Niels O. G., 2021, In: Aquaculture. 530, 9 p., 735754.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Characterization of the Aerobic Anoxygenic Phototrophic Bacterium Sphingomonas sp. AAP5

    Kopejtka, K., Zeng, Y., Kaftan, D., Selyanin, V., Gardian, Z., Tomasch, J., Sommaruga, R. & Koblížek, M., 2021, In: Microorganisms. 9, 4, 13 p., 768.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Clonostachys rosea to control plant diseases

    Jensen, Dan Funck, Dubey, M., Jensen, Birgit & Karlsson, M., 2021, Microbial bioprotectants for plant disease management. p. 429-471 45 p. (Burleigh Dodds series in agricultural science).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

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