Microbial Ecology and Biotechnology

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  1. Published

    A broad-host range dual-fluorescence reporter system for gene expression analysis in Gram-negative bacteria

    Hennessy, Rosanna Catherine, Christiansen, L., Olsson, S. & Stougaard, P., 2018, In: Journal of Microbiological Methods. 144, p. 173-176 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    A cerato-platanin protein SsCP1 targets plant PR1 and contributes to virulence of Sclerotinia sclerotiorum

    Yang, G., Tang, L., Gong, Y., Xie, J., Fu, Y., Jiang, D., Li, G., Collinge, David B., Chen, W. & Cheng, J., 2018, In: New Phytologist. 217, 2, p. 739-755 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    A comprehensive dataset on spatiotemporal variation of microbial plankton communities in the Baltic Sea

    Latz, Meike, Andersson, A., Brugel, S., Hedblom, M., Jurdzinski, K. T., Karlson, B., Lindh, M., Lycken, J., Torstensson, A. & Andersson, A. F., 2024, In: Scientific Data. 11, 9 p., 18.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    A converging subset of soil bacterial taxa is permissive to the IncP-1 plasmid pKJK5 across a range of soil copper contamination

    Song, J., Klümper, U., Riber, Leise, Dechesne, A., Smets, B. F., Sørensen, Søren Johannes & Brandt, Kristian Koefoed, 2020, In: FEMS Microbiology Ecology. 96, 11, 10 p., fiaa200.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. E-pub ahead of print

    A data-driven genome annotation approach for cassava

    Chenna, Swetha, Ivanov, M., Nielsen, Tue Kjærgaard, Chalenko, Karina, Olsen, Evy, Jørgensen, Kirsten, Sandelin, Albin Gustav & Marquardt, Sebastian, 2024, (E-pub ahead of print) In: Plant Journal.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    A flavonoid 7-O-methyltransferase is expressed in barely leaves in response to pathogen attack

    Christensen, Anders, Gregersen, P. L., Olsen, C. E. & Collinge, David B., 1 Jan 1998, In: Plant Molecular Biology. 36, 2, p. 219-227 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    A global microbiome survey of vineyard soils highlights the microbial dimension of viticultural terroirs

    Gobbi, Alex, Acedo, A., Imam, N., Santini, R. G., Ortiz-Alvarez, R., Ellegaard-Jensen, L., Belda, I. & Hansen, Lars Hestbjerg, 2022, In: Communications Biology . 5, 9 p., 241.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    A microplate reader-based system for visualizing transcriptional activity during in vivo microbial interactions in space and time

    Hennessy, Rosanna Catherine, Stougaard, P. & Olsson, S., 2017, In: Scientific Reports. 7, 6 p., 281.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    A non-antifungal rhizobacterium stimulates plant immunity to protect tomato and Kalanchoe against Fusarium oxysporum and wheat against Zymoseptoria tritici

    Madriz Ordenana, Kenneth, Pazarlar, Sercan, Jørgensen, Hans Jørgen Lyngs, Nielsen, Tue Kjærgaard, Nielsen, K. L., Zhang, Y. & Thordal-Christensen, Hans, 2021. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  10. Published

    A novel Queuovirinae lineage of Pseudomonas aeruginosa phages encode dPreQ0 DNA modifications with a single GA motif that provide restriction and CRISPR Cas9 protection in vitro

    Olsen, Nikoline S., Nielsen, Tue Kjærgaard, Cui, L., Dedon, P., Neve, H., Hansen, Lars Hestbjerg & Kot, Witold, 2023, In: Nucleic Acids Research. 51, 16, 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    A novel baiting microcosm approach used to identify the bacterial community associated with Penicillium bilaii hyphae in soil

    Ghodsalavi, B., Svenningsen, N. B., Hao, X., Olsson, S., Nicolaisen, Mette Haubjerg, Al-Soud, W. A., Sørensen, Søren Johannes & Nybroe, O., 27 Oct 2017, In: PLOS ONE. 12, 10, 14 p., e0187116.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    A novel enzyme portfolio for red algal polysaccharide degradation in the marine bacterium Paraglaciecola hydrolytica S66T encoded in a sizeable polysaccharide utilization locus

    Schultz-Johansen, M., Bech, P. K., Hennessy, Rosanna Catherine, Glaring, M. A., Barbeyron, T., Czjzek, M. & Stougaard, P., 2018, In: Frontiers in Microbiology. 9, 15 p., 839.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    A novel hybrid concept for implementation in drinking water treatment targets micropollutant removal by combining membrane filtration with biodegradation

    Hylling, O., Nikbakht Fini, M., Ellegaard-Jensen, L., Muff, J., Madsen, H. T., Aamand, J. & Hansen, Lars Hestbjerg, 1 Dec 2019, In: Science of the Total Environment. 694, p. 1-12 133710.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    A novel microcosm to identify inherently competitive microorganisms with the ability to mineralize phytate in solum

    Pittroff, S. M., Olsson, S., Doolette, A., Greiner, R., Richardson, A. E. & Nicolaisen, Mette Haubjerg, 2021, In: Soil Ecology Letters. 3, p. 367-382

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    A novel six-phage cocktail reduces Pectobacterium atrosepticum soft rot infection in potato tubers under simulated storage conditions

    Carstens, Alexander Byth, Djurhuus, Amaru Miranda, Kot, Witold & Hansen, Lars Hestbjerg, 1 May 2019, In: FEMS Microbiology Letters. 366, 9, p. 1-8 fnz101.

    Research output: Contribution to journal › Letter › Research › peer-review

  16. Published

    A novel transcription factor UvCGBP1 regulates development and virulence of rice false smut fungus Ustilaginoidea virens

    Chen, X., Li, P., Liu, H., Chen, X., Huang, J., Luo, C., Li, G., Hsiang, T., Collinge, David B. & Zheng, L., 2021, In: Virulence. 12, 1, p. 1563-1579 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    A pathogen-induced gene of barley encodes a HSP90 homologue showing striking similarity to vertebrate forms resident in the endoplasmic reticulum

    Walther-Larsen, H., Brandt, J., Collinge, David B. & Thordal-Christensen, Hans, 1 Mar 1993, In: Plant Molecular Biology. 21, 6, p. 1097-1108 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    A pathogen‐induced gene of barley encodes a protein showing high similarity to a protein kinase regulator

    Brandt, J., Thordal-Christensen, Hans, Vad, K., Gregersen, P. L. & Collinge, David B., 1 Jan 1992, In: The Plant Journal. 2, 5, p. 815-820 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    A putative O-methyltransferase from barley is induced by fungal pathogens and UV light

    Gregersen, P. L., Christensen, Anders, Sommer-Knudsen, J. & Collinge, David B., 1 Dec 1994, In: Plant Molecular Biology. 26, 6, p. 1797-1806 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    A revision of the history of the Colletotrichum acutatum species complex in the Nordic countries based on herbarium specimens.

    Sundelin, T., Strømeng, G. M., Gjærum, H. B., Amby, Daniel Buchvaldt, Ørstad, K., Jensen, Birgit, Lund, O. S. & Stensvand, A., 2015, In: F E M S Microbiology Letters. 362, 7 p., fnv130.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    A screening method for the isolation of bacteria capable of degrading toxic steroidal glycoalkaloids present in potato

    Hennessy, Rosanna Catherine, Jørgensen, Niels O. G., Scavenius, C., Enghild, J. J., Greve-Poulsen, M., Sørensen, O. B. & Stougaard, P., 2018, In: Frontiers in Microbiology. 9, p. 1-7 7 p., 2648.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    A sesquiterpene synthase from the endophytic fungus Serendipita indica catalyzes formation of viridiflorol

    Ntana, F., Bhat, W. W., Johnson, S. R., Jørgensen, Hans Jørgen Lyngs, Collinge, David B., Jensen, Birgit & Hamberger, B., 2021, In: Biomolecules. 11, 6, 16 p., 898.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    A simple model based on known plant defence reactions is sufficient to explain most aspects of nodulation

    Mellor, R. B. & Collinge, David B., 1 Jan 1995, In: Journal of Experimental Botany. 46, 1, p. 1-18 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Abundance and diversity of culturable Pseudomonas constitute sensitive indicators for adverse long-term copper impacts in soil

    Thorsen, M. K., Brandt, Kristian Koefoed & Nybroe, O., 2013, In: Soil Biology & Biochemistry. 57, p. 933-935 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Accumulation of a putative guanidine compound in relation to other early defence reactions in epidermal cells of barley and wheat exhibiting resistance to Erysiphe graminis f.sp. hordei

    Wei, Y. D., De Neergaard, E., Thordal-Christensen, Hans, Collinge, David B. & Smedegaard-Petersen, V., 1 Jan 1994, In: Physiological and Molecular Plant Pathology. 45, 6, p. 469-484 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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