Microbial Ecology and Biotechnology

  1. 2013
  2. Published

    Improving diversity in cultures of bacteria from an extreme environment

    Vester, J. K., Glaring, M. A. & Stougaard, P., 2013, In: Canadian Journal of Microbiology. 59, 8, p. 581-586 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Management options for reducing the release of antibiotics and antibiotic resistance genes to the environment

    Pruden, A., Larsson, D. G. J., Amézquita, A., Collignon, P., Brandt, Kristian Koefoed, Graham, D. W., Lazorchak, J. M., Suzuki, S., Silley, P., Snape, J. R., Topp, E., Zhang, T. & Zhu, Y., 2013, In: Environmental Health Perspectives. 121, 8, p. 878-885 8 p.

    Research output: Contribution to journalReviewResearchpeer-review

  4. Published

    Microbial diversity and enzymes in ikaite columns: a cold and alkaline environment in Greenland

    Vester, J. K., Lylloff, J. E., Glaring, M. A. & Stougaard, P., 2013, Polyextremophiles: life under multiple forms of stress. Seckback, J., Oren, A. & Stan-Lotter, H. (eds.). Springer, Vol. IV. p. 365-380 16 p. (Cellular Origin, Life in Extreme Habitats and Astrobiologuy, Vol. 27).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  5. Published

    The copper metallome in prokaryotic cells

    Rensing, C. G. T. & McDevitt, S. F., 2013, Metallomics and the cell. Banci, L. (ed.). Springer, p. 417-450 34 p. (Metal Ions in Life Sciences, Vol. 12).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  6. Published

    Toxicity: resistance pathways for metalloids and toxic metals

    Liu, Z., Rensing, C. G. T. & Rosen, B. P., 2013, Encyclopedia of inorganic and bioinorganic chemistry. Wiley

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  7. 2014
  8. Published

    BacMet: antibacterial biocide and metal resistance genes database

    Pal, C., Bengtsson-Palme, J., Rensing, C. G. T., Kristiansson, E. & Larsson, D. G. J., 2014, In: Nucleic Acids Research. 42, D1, p. D737-D743 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Bacterial diversity in Greenlandic soils as affected by potato cropping and inorganic versus organic fertilization

    Michelsen, C. F., Pedas, P. R., Glaring, M. A., Schjoerring, Jan K. & Stougaard, P., 2014, In: Polar Biology. 37, 1, p. 61-71 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Biocidal mechanisms of metallic copper surfaces

    Santo, C. E., German, N., Elguindi, J., Grass, G. & Rensing, C. G. T., 2014, Use of biocidal surfaces for reduction of healthcare acquired infections. Borkow, G. (ed.). Springer, p. 103-136 34 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  11. Published

    Compaction stimulates denitrification in an urban park soil using 15N tracing technique

    Li, S., Deng, H., Rensing, C. G. T. & Zhu, Y. G., 2014, In: Environmental Science and Pollution Research. 21, 5, p. 3783-3791 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Cyanobacteria-mediated arsenic redox dynamics is regulated by phosphorus in aquatic environments

    Zhang, S., Rensing, C. G. T. & Zhu, Y., 2014, In: Environmental Science & Technology (Washington). 48, 2, p. 994-1000 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Discovery of novel enzymes with industrial potential from a cold and alkaline environment by a combination of functional metagenomics and culturing

    Vester, J. K., Glaring, M. A. & Stougaard, P., 2014, In: Microbial Cell Factories. 13, 14 p., 72.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Dissecting the role of viruses in marine nutrient cycling: bacterial uptake of D- and L-amino acids released by viral lysis

    Shelford, E. J., Jørgensen, Niels O. G., Rasmussen, S., Suttle, C. A. & Middelboe, Mathias, 2014, In: Aquatic Microbial Ecology. 73, 3, p. 235-243 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Evaluation of the leucine incorporation technique for detection of pollution-induced community tolerance to copper in a long-term agricultural field trial with urban waste fertilizers

    Lekfeldt, J. D. S., Magid, Jakob, Holm, Peter Engelund, Nybroe, O. & Brandt, Kristian Koefoed, 2014, In: Environmental Pollution. 194, p. 78-85 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Genes conferring copper resistance in Sinorhizobium meliloti CCNWSX0020 also promote growth of Medicago lupulina in copper contaminated soil

    Li, Z., Ma, Z., Rensing, C. G. T. & Wei, G., 2014, In: Applied and Environmental Microbiology. 80, 6, p. 1961-1971 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Genome sequences of three highly copper-resistant Salmonella enterica subsp. I serovar typhimurium strains isolated from pigs in Denmark

    Qin, Y., Hasman, H., Aarestrup, F. M., Alwathnani, H. A. & Rensing, C. G. T., 2014, In: Genome Announcements. 2, 6, 2 p., e01334-14.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Genome sequences of two copper-resistant Escherichia coli strains isolated from copper-fed pigs

    Lüthje, F. L., Hasman, H., Aarestrup, F. M., Alwathnani, H. A. & Rensing, C. G. T., 2014, In: Genome Announcements. 2, 6, 2 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Geosmin off-flavour in pond-raised fish in southern Bangladesh and occurrence of potential off-flavour producing organisms

    Petersen, Mikael Agerlin, Alam, A., Rahman, M., Ali, L., Mahmud, S., Schlüter, L. & Jørgensen, Niels O. G., 2014, In: Aquaculture Environment Interactions. 5, p. 107-116 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    Influence of mussel shell on As and Cr competitive and non-competitive sorption-desorption kinetics in a mine soil: stirred flow chamber experiments

    Fernandez Calviño, D., Garrido-Rodríguez, B., Cutillas-Barreiro, L., Araújo-Nespereira, P., Arias-Estevez, M., Fernandez-Sanjurjo, M. J., álvarez-Rodríguez, E. & Núnez-Delgado, A., 2014, In: Geoderma. 232-234, p. 300-308 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Multi-template polymerase chain reaction

    Kalle, E., Kubista, M. & Rensing, C. G. T., 2014, In: Biomolecular Detection and Quantification. 2, p. 11-29 19 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Novel Industrial Enzymes from Uncultured Arctic Microorganisms: Cold- and Alkaline-active Enzymes of Microbial Origin from the Ikaite Columns of SW Greenland

    Vester, J. K., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/ReportPh.D. thesisResearch

  23. Published

    Phytoremediation of heavy and transition metals aided by legume-rhizobia symbiosis

    Hao, X., Taghavi, S., Xie, P., Orbach, M. J., Alwathnani, H. A., Rensing, C. G. T. & Wei, G., 2014, In: International Journal of Phytoremediation. 16, 2, p. 179-202 24 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Pine bark as bio-adsorbent for Cd, Cu, Ni, Pb and Zn: batch-type and stirred flow chamber experiments

    Cutillas-Barreiro, L., Ansias-Manso, L., Fernandez Calviño, D., Arias-Estévez, M., Nóvoa-Muñoz, J. C., Fernández-Sanjurjo, M. J., Álvarez-Rodríguez, E. & Núñez-Delgado, A., 2014, In: Journal of Environmental Management. 144, p. 258-264 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Removal of zinc from aqueous solution by metal resistant symbiotic bacterium Mesorhizobium amorphae

    Hao, X., Mohamad, O. A., Xie, P., Rensing, C. G. T. & Wei, G., 2014, In: Separation Science and Technology. 49, 3, p. 376-387 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Selenite reduction by the obligate aerobic bacterium Comamonas testosteroni S44 isolated from a metal-contaminated soil

    Zheng, S., Su, J., Wang, L., Yao, R., Wang, D., Deng, Y., Wang, R., Wang, G. & Rensing, C. G. T., 2014, In: BMC Microbiology. 14, 14 p., 204.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Species-specific content of As, Pb, and other elements in pangas (Pangasianodon hypophthalmus) and tilapia (Oreochromis niloticus) from aquaculture ponds in southern Bangladesh

    Marcussen, H., Alam, M. A., Rahman, M. M., Ali, M. L., Mahmud, S. & Jørgensen, Niels O. G., 2014, In: Aquaculture. 426-427, p. 85-87 3 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Published

    Surface physicochemistry and ionic strength affects eDNA's role in bacterial adhesion to abiotic surfaces

    Regina, V. R., Lokanathan, A. R., Modrzynski, J. J., Sutherland, D. & Meyer, R. L., 2014, In: PLOS ONE. 9, 8, 8 p., e105033.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    The ash dieback crisis: genetic variation in resistance can prove a long-term solution

    McKinney, L. V., Nielsen, Lene Rostgaard, Collinge, David B., Thomsen, Iben Margrete, Hansen, Jon Kehlet & Kjær, Erik Dahl, 2014, In: Plant Pathology. 63, 3, p. 485-499 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Transcriptomic profiling to identify genes involved in Fusarium mycotoxin Deoxynivalenol and Zearalenone tolerance in the mycoparasitic fungus Clonostachys rosea

    Kosawang, Chatchai, Karlsson, M., Jensen, Dan Funck, Dilokpimol, A. & Collinge, David B., 2014, In: BMC Genomics. 15, 11 p., 55.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Translational coupling of nasST expression in Azotobacter vinelandii prevents overexpression of the nasT gene

    Wang, B., Rensing, C. G. T., Pierson , L. S., Zhao, H. & Kennedy, C., 2014, In: F E M S Microbiology Letters. 361, 2, p. 123-130 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    Zearalenone detoxification by zearalenone hydrolase is important for the antagonistic ability of Clonostachys rosea against mycotoxigenic Fusarium graminearum

    Kosawang, Chatchai, Karlsson, M., Vélez, H., Rasmussen, P. H., Collinge, David B., Jensen, Birgit & Jensen, Dan Funck, 2014, In: Fungal Biology. 118, 4, p. 364-373 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    Endophytic colonization of tomato plants by the biological control agent Clonostachys rosea

    Høyer, A. K., Jørgensen, Hans Jørgen Lyngs, Amby, Daniel Buchvaldt & Jensen, Birgit, 15 Jun 2014. 1 p.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  34. 2015
  35. Published

    Pseudomonas putida mt-2 tolerates reactive oxygen species generated during matric stress by inducing a major oxidative defense response

    Svenningsen, N. B., Pérez-Pantoja, D., Nikel, P. I., Nicolaisen, Mette Haubjerg, de Lorenzo, V. & Nybroe, O., 2015, In: BMC Microbiology. 15, 11 p., 202.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    Pseudomonas Lipopeptide Biosurfactants: Roles in Pollutant Biodegradation and Biofilm Formation

    Bonnichsen, L., 2015, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 105 p.

    Research output: Book/ReportPh.D. thesisResearch

  37. Published

    A revision of the history of the Colletotrichum acutatum species complex in the Nordic countries based on herbarium specimens.

    Sundelin, T., Strømeng, G. M., Gjærum, H. B., Amby, Daniel Buchvaldt, Ørstad, K., Jensen, Birgit, Lund, O. S. & Stensvand, A., 2015, In: F E M S Microbiology Letters. 362, 7 p., fnv130.

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published

    Activity-guided separation of Chromolaena odorata leaf extract reveals fractions with rice disease-reducing properties

    Rodriguez Algaba, J., Sørensen, J. C., Sørensen, H., Nguyen, D. K., Collinge, David B. & Jørgensen, Hans Jørgen Lyngs, 2015, In: European Journal of Plant Pathology. 143, 2, p. 331-341 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    An exceptionally cold-adapted alpha-amylase from a metagenomic library of a cold and alkaline environment

    Vester, J. K., Glaring, M. A. & Stougaard, P., 2015, In: Applied Microbiology and Biotechnology. 99, 2, p. 717-727 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    Bioactivities by a crude extract from the Greenlandic Pseudomonas sp. In5 involves the nonribosomal peptides, nunamycin and nunapeptin

    Michelsen, C. F., Jensen, H., Venditto, V. J., Hennessy, Rosanna Catherine & Stougaard, P., 2015, In: PeerJ. 3, 16 p., e1476.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    Biochemical composition of the promising live feed tropical calanoid copepod Pseudodiaptomus annandalei (Sewell 1919) cultured in Taiwanese outdoor aquaculture ponds

    Rayner, T. A., Jørgensen, Niels O. G., Blanda, E., Wu, C., Huang, C., Mortensen, J., Hwang, J. & Hansen, B. W., 2015, In: Aquaculture. 441, p. 25-34 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Cloning, purification and characterization of a thermostable beta-galactosidase from Bacillus licheniformis strain KG9

    Bekler, F. M., Stougaard, P., Guven, K., Guven, R. G. & Acer, O., 2015, In: Cellular and Molecular Biology. 61, 3, p. 71-78 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    Competitive adsorption/desorption of tetracycline, oxytetracycline and chlortetracycline on two acid soils: stirred flow chamber experiments

    Fernandez Calviño, D., Bermudez-Couso, A., Arias-Estevez, M., Carlos Novoa-Munoz, J., Fernandez-Sanjurjo, M. J., Alvarez-Rodriguez, E. & Nunez-Delgado, A., 2015, In: Chemosphere. 134, p. 361-366 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    Copper content and distribution in vineyard soils from Betanzos (A Coruña, Spain)

    Gómez-Armesto, A., Carballeira-Díaz, J., Pérez-Rodríguez, P., Fernandez Calviño, D., Arias-Estévez, M., Nóvoa-Muñoz, J. C., Álvarez-Rodríguez, E., Fernández-Sanjurjo, M. J. & Núñez-Delgado, A., 2015, In: Spanish Journal of Soil Science. 5, 1, p. 60-71 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    Copper tolerance mechanisms of Mesorhizobium amorphae and its role in aiding phytostabilization by Robinia pseudoacacia in copper contaminated soil

    Hao, X., Xie, P., Zhu, Y., Taghavi, S., Wei, G. & Rensing, C. G. T., 2015, In: Environmental Science & Technology (Washington). 49, 4, p. 2328-2340 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    Digested wheat gluten inhibits binding between leptin and its receptor

    Jonsson, T., Memon, A. A., Sundquist, K., Sundquist, J., Olsson, S., Nalla, A., Bauer, M. & Linse, S., 2015, In: B M C Biochemistry. 16, 5 p., 3.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    Draft Genome Sequence of Se(IV)-Reducing Bacterium Pseudomonas migulae ES3-33

    Li, Xuan Ji, Kot, W., Wang, D., Zheng, S., Wang, G., Hansen, L. H. & Rensing, C., 2015, In: Genome Announcements. 3, 3, p. 1-2 2 p., e00406-15.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Draft genome sequence of Pseudomonas sp. strain in5 isolated from a Greenlandic disease suppressive soil with potent antimicrobial activity

    Hennessy, Rosanna Catherine, Glaring, M. A., Michelsen, C. F., Olsson, S. & Stougaard, P., 2015, In: Genome Announcements. 3, 6, 1 p., e01251-15.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Draft genome sequences of two protease-producing strains of Arsukibacterium, isolated from two cold and alkaline environments

    Lylloff, J. E., Hansen, L. B. S., Jepsen, M., Hallin, P. F., Sørensen, Søren Johannes, Stougaard, P. & Glaring, M. A., 2015, In: Genome Announcements. 3, 3, 2 p., e00585-15.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    Ecotoxicological assessment of antibiotics: a call for improved consideration of microorganisms

    Brandt, Kristian Koefoed, Amézquita, A., Backhaus, T., Boxall, A., Coors, A., Heberer, T., Lawrence, J. R., Lazorchak, J., Schönfeld, J., Snape, J. R., Zhu, Y. & Topp, E., 2015, In: Environment International. 85, p. 189-205 17 p.

    Research output: Contribution to journalReviewResearchpeer-review

  51. Published

    Effect of crushed mussel shell addition on bacterial growth in acid polluted soils

    Fernandez Calviño, D., Garrido-Rodríguez, B., Arias-Estévez, M., Díaz-Raviña, M., Álvarez-Rodríguez, E., Fernández-Sanjurjo, M. J. & Nuñez-Delgado, A., 2015, In: Applied Soil Ecology. 85, p. 65-68 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. Published

    Expression profiling and functional analyses of BghPTR2, a peptide transporter from Blumeria graminis f. sp hordei

    Droce, A., Holm, K. B., Olsson, S., Frandsen, R. J. N., Sondergaard, T. E., Sørensen, J. L. & Giese, H., 2015, In: Fungal Biology. 119, 7, p. 551-559 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  53. Published

    Fate of arsenate following arsenite oxidation in Agrobacterium tumefaciens GW4

    Wang, Q., Qin, D., Zhang, S., Wang, L., Li, J., Rensing, C. G. T., McDermott, T. R. & Wang, G., 2015, In: Environmental Microbiology. 17, 6, p. 1926-1940 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

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