Section for Plant Glycobiology

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  1. 2014
  2. Published

    Pectin metabolism and assembly in the cell wall of the charophyte green alga Penium margaritaceum

    Domozych, D. S., Sørensen, I., Popper, Z. A., Ochs, J., Andreas, A., Fangel, J. U., Pielach, A., Sacks, C., Brechka, H., Ruisi-Besares, P., Willats, W. G. T. & Rose, J. K. C., 2014, In: Plant Physiology. 165, 1, p. 105-118 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Profiling the main cell wall polysaccharides of grapevine leaves using high-throughput and fractionation methods

    Moore, J. P., Nguema-Ona, E., Fangel, J. U., Willats, W. G. T., Hugo, A. & Vivier, M. A., 2014, In: Carbohydrate Polymers. 99, p. 190-198 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Range of cell-wall alterations enhance saccharification in Brachypodium distachyon mutants

    Marriott, P. E., Sibout, R., Lapierre, C., Fangel, J. U., Willats, W. G. T., Hofte, H., Gómez, L. D. & McQueen-Mason, S. J., 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 40, p. 14601-14606 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Redox Impact on Starch Biosynthetic Enzymes in Arabidopsis thaliana

    Skryhan, K., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  6. Published

    Sea surface temperatures in Disko Bay during the Little Ice Age - caution needs to be exercised before assigning Thalassiosira kushirensis resting spore as a warm-water indicator in palaeoceanographic studies

    Weckstrom, K., Miettinen, A., Caissie, B., Pearce, C., Ellegaard, Marianne, Krawczyk, D. & Witkowski, A., 2014, In: Quaternary Science Reviews. 101, p. 234-237 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Second meal effect on appetite and fermentation of wholegrain rye foods

    Ibrügger, S., Vigsnæs, L. K., Blennow, Andreas, Skuflic, D., Raben, Anne, Lauritzen, Lotte & Kristensen, M. B., 2014, In: Appetite. 80, p. 248-256 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Selection and phenotypic characterization of a core collection of Brachypodium distachyon inbred lines

    Tyler, L., Fangel, J. U., Fagerström, A., Steinwand, M. A., Raab, T. K., Willats, W. G. T. & Vogel, J. P., 2014, In: B M C Plant Biology. 14, 15 p., 25 .

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Site-Directed Mutagenesis of IRX9, IRX9L and IRX14 Proteins Involved in Xylan Biosynthesis: Glycosyltransferase Activity Is Not Required for IRX9 Function in Arabidopsis

    Ren, Y., Hansen, S. F., Ebert, B., Lau, J. & Scheller, H. V., 2014, In: P L o S One. 9, 8, p. 1-9 9 p., e105014.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Stable transformation and reverse genetic analysis of Penium margaritaceum: a platform for studies of charophyte green algae, the immediate ancestors of land plants

    Sørensen, I., Fei, Z., Andreas, A., Willats, W. G. T., Domozych, D. S. & Rose, J. K. C., 2014, In: Plant Journal. 77, 3, p. 339-351 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Starch bioengineering affects cereal grain germination and seedling establishment

    Shaik, S. S., Carciofi, M., Martens, Helle Jakobe, Hebelstrup, K. & Blennow, Andreas, 2014, In: Journal of Experimental Botany. 65, 9, p. 2257-2270

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Temporal changes in physical, chemical and biological sediment parameters in a tropical estuary after mangrove deforestation

    Ellegaard, Marianne, Nguyen, N. T. G., Andersen, Thorbjørn Joest, Michelsen, Anders, Lam Nguyen, N., Hai Doan, N., Kristensen, E., Weckström, K., Phuoc Hoang Son, T. & Lund-Hansen, L. C., 2014, In: Estuarine, Coastal and Shelf Science. 142, p. 32-40 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    The ash dieback crisis: genetic variation in resistance can prove a long-term solution

    McKinney, L. V., Nielsen, Lene Rostgaard, Collinge, David B., Thomsen, Iben Margrete, Hansen, Jon Kehlet & Kjær, Erik Dahl, 2014, In: Plant Pathology. 63, 3, p. 485-499 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    The deposition and characterization of starch in Brachypodium distachyon

    Tanackovic, V., Svensson, J. T., Jensen, S. L., Buléon, A. & Blennow, Andreas, 2014, In: Journal of Experimental Botany. 65, 18, p. 5179-5192 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    The role of the cell wall in plant immunity

    Malinovsky, F. G., Fangel, J. U. & Willats, W. G. T., 2014, In: Frontiers in Plant Science. 5, 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    The structurally effect of surface coated rhamnogalacturonan I on response of the osteoblast-like cell line SaOS-2

    Svava, R., Gurzawska, K., Yihau, Y., Haugshøj, K. B., Dirscherl, K., Levery, S. B., Jørgensen, Niklas Rye, Gotfredsen, Klaus, Damager, I., Ulvskov, Peter & Jørgensen, Bodil, 2014, In: Journal of Biomedical Materials Research. Part A. 102, 6, p. 1961-1971 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    The Arabidopsis cytosolic proteome: the metabolic heart of the cell

    Ito, J., Parsons, H. T. & Heazlewood, J. L., 2014, In: Frontiers in Plant Science. 5, 8 p., 21.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Tracking developmentally regulated post-synthetic processing of homogalacturonan and chitin using reciprocal oligosaccharide probes

    Mravec, Jozef, Kracun, S. K., Rydahl, M. G., Westereng, B., Miart, F., Clausen, M. H., Fangel, J. U., Daugaard, M., Van Cutsem, P., de Fine Licht, Henrik Hjarvard, Höfte, H., Malinovsky, F. G., Domozych, D. S. & Willats, W. G. T., 2014, In: Development. 141, p. 4841-4850 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Transcriptomic profiling to identify genes involved in Fusarium mycotoxin Deoxynivalenol and Zearalenone tolerance in the mycoparasitic fungus Clonostachys rosea

    Kosawang, Chatchai, Karlsson, M., Jensen, Dan Funck, Dilokpimol, A. & Collinge, David B., 2014, In: BMC Genomics. 15, 11 p., 55.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Understanding the relationship between cotton fiber properties and non-cellulosic cell wall polysaccharides

    Rajasundaram, D., Runavot, J., Guo, X., Willats, W. G. T., Meulewaeter, F. & Selbig, J., 2014, In: P L o S One. 9, 11, 11 p., e112168.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. 2013
  22. Published

    The Amborella Genome and the Evolution of Flowering Plants

    Albert, V. A., Barbazuk, W. B., dePamphilis, C. W., Der, J. P., Leebens-Mack, J., Ma, H., Palmer, J. D., Rounsley, S., Sankoff, D., Schuster, S. C., Soltis, D. E., Soltis, P. S., Wessler, S. R., Wing, R. A., Albert, V. A., Ammiraju, J. S. S., Barbazuk, W. B., Chamala, S., Chanderbali, A. S., dePamphilis, C. W. & 129 others, Der, J. P., Determann, R., Leebens-Mack, J., Ma, H., Ralph, P., Rounsley, S., Schuster, S. C., Soltis, D. E., Soltis, P. S., Talag, J., Tomsho, L., Walts, B., Wanke, S., Wing, R. A., Albert, V. A., Barbazuk, W. B., Chamala, S., Chanderbali, A. S., Chang, T., Determann, R., Lan, T., Soltis, D. E., Soltis, P. S., Arikit, S., Axtell, M. J., Ayyampalayam, S., Barbazuk, W. B., Burnette III, J. M., Chamala, S., De Paoli, E., dePamphilis, C. W., Der, J. P., Estill, J. C., Farrell, N. P., Harkess, A., Jiao, Y., Leebens-Mack, J., Liu, K., Mei, W., Meyers, B. C., Shahid, S., Wafula, E., Walts, B., Wessler, S. R., Zhai, J., Zhang, X., Albert, V. A., Carretero-Paulet, L., dePamphilis, C. W., Der, J. P., Jiao, Y., Leebens-Mack, J., Lyons, E., Sankoff, D., Tang, H., Wafula, E., Zheng, C., Albert, V. A., Altman, N. S., Barbazuk, W. B., Carretero-Paulet, L., dePamphilis, C. W., Der, J. P., Estill, J. C., Jiao, Y., Leebens-Mack, J., Liu, K., Mei, W., Wafula, E., Altman, N. S., Arikit, S., Axtell, M. J., Chamala, S., Chanderbali, A. S., Chen, F., Chen, J., Chiang, V., De Paoli, E., dePamphilis, C. W., Der, J. P., Determann, R., Fogliani, B., Guo, C., Harholt, J., Harkess, A., Job, C., Job, D., Kim, S., Kong, H., Leebens-Mack, J., Li, G., Li, L., Liu, J., Ma, H., Meyers, B. C., Park, J., Qi, X., Rajjou, L., Burtet-Sarramegna, V., Sederoff, R., Shahid, S., Soltis, D. E., Soltis, P. S., Sun, Y., Ulvskov, Peter, Villegente, M., Xue, J., Yeh, T., Yu, X., Zhai, J., Acosta, J. J., Albert, V. A., Barbazuk, W. B., Bruenn, R. A., Chamala, S., de Kochko, A., dePamphilis, C. W., Der, J. P., Herrera-Estrella, L. R., Ibarra-Laclette, E., Kirst, M., Leebens-Mack, J., Pissis, S. P., Poncet, V., Schuster, S. C., Soltis, D. E., Soltis, P. S., Tomsho, L. & Project, A. G., 20 Dec 2013, In: Science. 342, 6165, 10 p., 1241089.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Reduced Wall Acetylation Proteins Play Vital and Distinct Roles in Cell Wall O-Acetylation in Arabidopsis

    Manabe, Y., Verhertbruggen, Y., Gille, S., Harholt, J., Chong, S., Pawar, P. M., Mellerowicz, E. J., Tenkanen, M., Cheng, K., Pauly, M. & Scheller, H. V., 1 Nov 2013, In: Plant Physiology. 163, 3, p. 1107-1117 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Classification, Naming and Evolutionary History of Glycosyltransferases from Sequenced Green and Red Algal Genomes

    Ulvskov, Peter, Paiva, D. S., Domozych, D. & Harholt, J., 16 Oct 2013, In: P L o S One. 8, 10, 15 p., e76511.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    A galactosyltransferase acting on arabinogalactan protein glycans is essential for embryo development in Arabidopsis

    Geshi, N., Johansen, J. N., Dilokpimol, A., Rolland, A., Belcram, K., Verger, S., Kotake, T., Tsumuraya, Y., Kaneko, S., Tryfona, T., Dupree, P., Scheller, H. V., Höfte, H. & Mouille, G., 2013, In: Plant Journal. 76, 1, p. 128-137 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    A β-glucuronosyltransferase from Arabidopsis thaliana involved in biosynthesis of type II arabinogalactan has a role in cell elongation during seedling growth

    Knoch, E., Dilokpimol, A., Tryfona, T., Poulsen, C. P., Xiong, G., Harholt, J., Petersen, Bent L, Ulvskov, Peter, Hadi, M. Z., Kotake, T., Tsumuraya, Y., Pauly, M., Dupree, P. & Geshi, N., 2013, In: Plant Journal. 76, 6, p. 1016-1029 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Advanced technologies for plant cell wall evolution and diversity

    Fangel, J. U., 2013, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  28. Published

    Arabinose-rich polymers as an evolutionary strategy to plasticize resurrection plant cell walls against desiccation

    Moore, J. P., Nguema-Ona, E. E., Vicré-Gibouin, M., Sørensen, I., Willats, W. G. T., Driouich, A. & Farrent, J. M., 2013, In: Planta. 237, 3, p. 739-754 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Biochemical and kinetic characterisation of a novel xylooligosaccharide-upregulated GH43 β-d-xylosidase/α-l-arabinofuranosidase (BXA43) from the probiotic Bifidobacterium animalis subsp. lactis BB-12

    Viborg, A. H., Sørensen, K. I., Gilad, O., Steen-Jensen, D. B., Dilokpimol, A., Jacobsen, S. & Svensson, B., 2013, In: A M B Express. 3, 1, p. 56 8 p., 56.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Botanicals, endophytes and plant growth-promoting rhizobacteria (PGPR) to control Black Sigatoka disease of banana in Uganda

    Mortensen, C. N., Collinge, David B., Jørgensen, Hans Jørgen Lyngs, Gumisiriya, C., Kumakech, A., Kateete, S. N. & Okori, P., 2013, Makerere University.

    Research output: Book/Report › Report › Research

  31. Published

    Characterization of pectin nanocoatings at polystyrene and titanium surfaces

    Gurzawska, K. A., Dirscherl, K., Yihua, Y., Chrestensen, I. B., Jørgensen, Bodil, Svava, R., Nielsen, M. W., Jørgensen, Niklas Rye & Gotfredsen, Klaus, 2013, In: Journal of Surface Engineered Materials and Advanced Technology. 3, p. 20-28 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Comparative fermentation of insoluble carbohydrates in an in vitro human feces model spiked with Lactobacillus acidophilus NCFM

    Knudsen, A., van Zanten, G. C., Jensen, S. L., Forssten, S. D., Saarinen, M., Lahtinen, S. J., Bandsholm, O., Svensson, B., Jespersen, Lene & Blennow, Andreas, 2013, In: Starch. 65, 3-4, p. 346-353 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Detoxification of the Fusarium mycotoxin zearalenone is an important trait of Chlonostachys rosea in biocontrol of Fusarium foot rot of barley

    Kosawang, Chatchai, Karlsson, M., Jensen, Birgit, Vélëz, H., Rasmussen, P. H., Collinge, David B. & Jensen, Dan Funck, 2013, Biological control of fungal and bacterial plant pathogens. International Organisation for Biological and Integrated Control (IOBC), p. 133-136 4 p. (IOBC-WPRS Bulletin, Vol. 86).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  34. Published

    Effect of amylose deposition on potato tuber starch granule architecture and dynamics as studied by lintnerization

    Wikman, J., Blennow, Andreas & Bertoft, E., 2013, In: Biopolymers. 99, 1, p. 73-83 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Enzyme affinity to cell types in wheat straw (Triticum aestivum L.) before and after hydrothermal pretreatment

    Hansen, M. A. T., Hidayat, B. J., Mogensen, K. K., Jeppesen, M. D., Jørgensen, Bodil, Johansen, Katja Salomon & Thygesen, Lisbeth Garbrecht, 2013, In: Biotechnology for Biofuels. 6, 54, 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Fitness costs and trade-offs in plant disease

    Brown, J., Andrivon, D., Collinge, David B. & Nicholson, P., 2013, In: Plant Pathology. 62, S1, p. 1 1 p.

    Research output: Contribution to journal › Editorial › Research › peer-review

  37. Published

    Fusarium graminearum and its interactions with cereal heads: studies in the proteomics era

    Yang, F., Jacobsen, S., Jørgensen, Hans Jørgen Lyngs, Collinge, David B., Svensson, B. & Finnie, C. S., 2013, In: Frontiers in Plant Science. 4, 37

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Future cereal starch bioengineering: cereal ancestors encounter gene technology and designer enzymes

    Blennow, Andreas, Jensen, S. L., Shaik, S. S., Skryhan, K., Carciofi, M., Holm, P. B., Hebelstrup, K. & Tanackovic, V., 2013, In: Cereal Chemistry. 90, 4, p. 274-287 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Future prospects for genetically engineering disease-resistant plants

    Chen, Yan-Jun, Lyngkjær, M. F. & Collinge, David B., 2013, Molecular plant immunity. Sessa, G. (ed.). Wiley-Blackwell, p. 251-275 15 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  40. Published

    Hydration properties and phosphorous speciation in native, gelatinized and enzymatically modified potato starch analyzed by solid-state MAS NMR

    Larsen, F. H., Kasprzak, M. M., Lærke, H. N., Knudsen, K. E. B., Pedersen, S., Jørgensen, A. S. & Blennow, Andreas, 2013, In: Carbohydrate Polymers. 97, 2, p. 502-511 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Inactivation of OsIRX10 leads to decreased xylan content in rice culm cell walls and improved biomass saccharification

    Chen, X., Vega-Sánchez, M. E., Verhertbruggen, Y., Chiniquy, D., Canlas, P. E., Fagerström, A., Prak, L., Kristensen, U., Oikawa, A., Chern, M., Zuo, S., Lin, F., Auer, M., Willats, W. G. T., Bartley, L., Harholt, J., Scheller, H. V. & Ronald, P. C., 2013, In: Molecular Plant. 6, 2, p. 570-573 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Influencing cocoa flavour using Pichia kluyveri and Kluyveromyces marxianus in a defined mixed starter culture for cocoa fermentation

    Crafack, M., Mikkelsen, M. B., Saerens, S., Knudsen, M., Blennow, Andreas, Lowor, S., Takrama, J., Swiegers, J. H., Petersen, G. B., Heimdal, H. & Nielsen, Dennis Sandris, 2013, In: International Journal of Food Microbiology. 167, 1, p. 103-116 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Inhibition of cytoplasmic streaming by cytochalasin D is superior to paraformaldehyde fixation for measuring FRET between fluorescent protein-tagged Golgi components

    Poulsen, C. P., Vereb, G., Geshi, N. & Schulz, Alexander, 2013, In: Cytometry. Part A. 83, 9, p. 830-838 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Molecular determinants for cardiovascular TRPC6 channel regulation by Ca2+/calmodulin-dependent kinase II

    Shi, J., Geshi, N., Takahashi, S., Kiyonaka, S., Ichikawa, J., Hu, Y., Mori, Y., Ito, Y. & Inoue, R., 2013, In: Journal of Physiology. 591, 11, p. 2851-2866 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Molecular structure of large-scale extracted ß-glucan from barley and oat: identification of a significantly changed block structure in a high ß-glucan barley mutant

    Mikkelsen, M. S., Jespersen, Birthe P Møller, Larsen, F. H., Blennow, Andreas & Engelsen, Søren Balling, 2013, In: Food Chemistry. 136, 1, p. 130-138 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Overexpression of the grapevine PGIP1 in tobacco results in compositional changes in the leaf arabinoxyloglucan network in the absence of fungal infection

    Nguema-Ona, E., Moore, J. P., Fagerström, A. D., Fangel, J. U., Willats, W. G. T., Hugo, A. & Vivier, M. A., 2013, In: B M C Plant Biology. 13, 15 p., 46.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Oxidative stability and chemical safety of mayonnaise enriched with grape seed extract

    Altunkaya, A., Hedegaard, R. S. V., Harholt, J., Brimer, L., Gôkmen, V. & Skibsted, Leif Horsfelt, 2013, In: Food & Function. 4, 11, p. 1647-1653 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Palatability and chemical safety of apple juice fortified with pomegranate peel extract

    Altunkaya, A., Hedegaard, R. S. V., Harholt, J., Brimer, L., Gökmen, V. & Skibsted, Leif Horsfelt, 2013, In: Food & Function. 4, 10, p. 1468-1473 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Protein-protein interactions in the plant Golgi apparatus, studied with FRET acceptor photobleaching technique

    Poulsen, C. P., 2013, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 208 p.

    Research output: Book/Report › Ph.D. thesis › Research

  50. Published

    Proteomic changes and endophytic micromycota during storage of organically and conventionally grown carrots

    Louarn, S. J. Y., Nawrocki, A., Thorup-Kristensen, Kristian, Lund, O. S., Jensen, O. N., Collinge, David B. & Jensen, Birgit, 2013, In: Postharvest Biology and Technology. 76, p. 26-33 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Proteomic dissection of the Arabidopsis Golgi and trans-Golgi network

    Parsons, H. T., Drakakaki, G. & Heazlewood, J. L., 2013, In: Frontiers in Plant Science. 3, 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Published

    Red beet as a model system for studying vacuolar transport of primary and secondary metabolites

    Shetty, N. P., Jørgensen, Kirsten & Jørgensen, Hans Jørgen Lyngs, 2013, Red beet biotechnology: food and pharmaceutical applications. Neelwarne, B. (ed.). Springer Science+Business Media, p. 75-89 15 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

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