Niels Agerbirk

Niels Agerbirk

Associate Professor

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    ORCID: 0000-0003-4670-8330

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    1. Published

      Essentials in the acquisition, interpretation, and reporting of plant metabolite profiles

      Çiçek, S. S., Mangoni, A., Hanschen, F. S., Agerbirk, Niels & Zidorn, C., 2024, In: Phytochemistry. 220, 16 p., 114004.

      Research output: Contribution to journal › Review › Research › peer-review

    2. Published

      Flowers of Brassica nigra have high glucosinolate levels and are the preferred food of Pieris brassicae caterpillars

      van Loon, J. J. A., Smallegange, R. C., Blatt, S. E., Harvey, J. A., Agerbirk, Niels & Dicke, M., 2006, Glucosinolate biology, chemistry and biochemistry and its application to human health and agriculture. Max Planck Institute for Chemical Ecology, 1 p.

      Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

    3. Published

      Expression patterns, molecular markers and genetic diversity of insect-susceptible and resistant Barbarea genotypes by comparative trnscriptome analysis

      Zhang, X., Liu, T., Wei, X., Qiu, Y., Song, J., Wang, H., Shen, D., Agerbirk, Niels & Li, X., 2015, In: B M C Genomics. 16, 16 p., 486.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. Published

      Successful herbivore attack due to metabolic diversion of a plant chemical defense

      Wittstock, U., Agerbirk, Niels, Stauber, E. J., Olsen, C. E., Hippler, M., Mitchell-Olds, T., Gershenzon, J. & Vogel, H., 2004, In: Proceeding of the National Academy of Science. 101, 14, p. 4859-4864 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      Engineering and optimization of the 2-phenylethylglucosinolate production in Nicotiana benthamiana by combining biosynthetic genes from Barbarea vulgaris and Arabidopsis thaliana

      Wang, Cuiwei, Crocoll, C., Agerbirk, Niels & Halkier, Barbara Ann, 2021, In: Plant Journal. 106, 4, p. 978-992

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      Characterization of Arabidopsis CYP79C1 and CYP79C2 by Glucosinolate Pathway Engineering in Nicotiana benthamiana Shows Substrate Specificity Toward a Range of Aliphatic and Aromatic Amino Acids

      Wang, Cuiwei, Dissing, M. M., Agerbirk, Niels, Crocoll, C. & Halkier, Barbara Ann, 2020, In: Frontiers in Plant Science. 11, 13 p., 57.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      The chemistry of life: theoretical exercises:  DSH-Danish-Swedish Horticulture Science Degree Programme

      Tulinius, G., Bukh, C. & Agerbirk, Niels, 2002, København: Jordbrugsforlaget. 34 p.

      Research output: Book/Report › Book › Education

    8. Published

      Transient abiotic stresses lead to latent defense and reproductive responses over the Brassica rapa life cycle

      Steinbrenner, A. D., Agerbirk, Niels, Orians, C. M. & Chew, F. S., 2012, In: Chemoecology. 22, 4, p. 239-250 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      Flower vs. leaf feeding by Pieris brassicae: glucosinolate-rich flower tissues are preferred and sustain higher growth rate

      Smallegange, R. C., Loon, J. J. A. V., Blatt, S. E., Harvey, J. A., Agerbirk, Niels & Dicke, M., 2007, In: Journal of Chemical Ecology. 33, 10, p. 1831-1844 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      A recycling pathway for cyanogenic glycosides evidenced by the comparative metabolic profiling in three cyanogenic plant species

      Picmanova, M., Neilson, Elizabeth Heather Jakobsen, Motawie, Mohammed Saddik, Olsen, C. E., Agerbirk, Niels, Gray, C. J., Flitsch, S., Meier, S., Silvestro, D., Jørgensen, Kirsten, Sánchez Pérez, R., Møller, Birger Lindberg & Bjarnholt, Nanna, 2015, In: Biochemical Journal. 469, 3, p. 375-389 15 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. Published

      Methyl transfer in glucosinolate biosynthesis mediated by indole glucosinolate O-Methyltransferase 5

      Pfalz, M., Mukhaimar, M., Perreau, F., Kirk, J., Hansen, Cecilie Ida Cetti, Olsen, C. E., Agerbirk, Niels & Kroymann, J., 2016, In: Plant Physiology. 172, 4, p. 2190-2203 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    12. Published

      Characterization of transgenic Arabidopsis thaliana with metabolically engineered high levels of p-hydroxybenzylglucosinolate

      Petersen, Bent L, Andreasson, E., Bak, Søren, Agerbirk, Niels & Halkier, Barbara Ann, 2001, In: Planta. 212, p. 612-618

      Research output: Contribution to journal › Journal article › Research › peer-review

    13. Published

      Hydroxyl and methoxyl derivatives of benzylglucosinolate in Lepidium densiflorum with hydrolysis to isothiocyanates and non-isothiocyanate products: substitution governs product type and mass spectral fragmentation

      Pagnotta, E., Agerbirk, Niels, Olsen, C. E., Ugolini, L., Cinti, S. & Lazzeri, L., 2017, In: Journal of Agricultural and Food Chemistry. 65, 15, p. 3167-3178 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    14. Published

      Biokemiske laboratorieprojekter til studieretningsprojekter for gymnasieelever

      Olsen, S. & Agerbirk, Niels, 2007, Frederiksberg: Institut for Grundvidenskab, Det Biovidenskabelige Fakultet. 38 p.

      Research output: Book/Report › Compendium/lecture notes › Education

    15. Published

      Glucosinolate diversity within a phylogenetic framework of the tribe Cardamineae (Brassicaceae) unraveled with HPLC-MS/MS and NMR-based analytical distinction of 70 desulfoglucosinolates

      Olsen, C. E., Huang, X., Hansen, Cecilie Ida Cetti, Cipollini, D., Ørgaard, Marian, Matthes, A., Geu-Flores, Fernando, Koch, M. A. & Agerbirk, Niels, 2016, In: Phytochemistry. 132, p. 33-56 24 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    16. Published

      Taste detection of the non-volatile isothiocyanate moringin results in deterrence to glucosinolate-adapted insect larvae

      Müller, C., van Loon, J., Ruschioni, S., De Nicola, G. R., Olsen, C. E., Iori, R. & Agerbirk, Niels, 2015, In: Phytochemistry. 118, p. 139-148 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    17. Published

      Lack of sequestration of host plant glucosinolates in Pieris rapae and P. brassicae

      Müller, C., Agerbirk, Niels & Olsen, C. E., 2003, In: Chemoecology. 13, p. 47-54 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    18. Published

      Sequestration of host plant glucosinolates in the defensive hemolymph of the sawfly: Athalia rosae

      Müller, C., Agerbirk, Niels, Olsen, C. E., Boevé, J., Schaffner, U. & Brakefield, P. M., 2001, In: Journal of Chemical Ecology. 27, 12, p. 2505-2516 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    19. Published

      The Role of the Glucosinolate-Myrosinase System in Mediating Greater Resistance of Barbarea verna than B. vulgaris to Mamestra brassicae Larvae

      Mueller, C., Schulz, M., Pagnotta, E., Ugolini, L., Yang, T., Matthes, A., Lazzeri, L. & Agerbirk, Niels, 2018, In: Journal of Chemical Ecology. 44, 12, p. 1190-1205

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. Published

      Development and application of a virus-induced gene silencing protocol for the study of gene function in narrow-leafed lupin

      Mancinotti, Davide, Rodriguez, M. C., Frick, Karen Michiko, Dueholm, B., Jepsen, D. G., Agerbirk, Niels & Geu-Flores, Fernando, 2021, In: Plant Methods. 17, 1, 13 p., 131.

      Research output: Contribution to journal › Journal article › Research › peer-review

    21. Published

      Identification of Clubroot-Resistant Germplasm in a Radish (Raphanus sativus L.) Core Collection

      Ma, Y., Wang, H., Song, J., Yang, W., Jia, H., Agerbirk, Niels, Chen, Y., Li, C., Piao, Y., Li, S. & Zhang, X., 2024, In: Agronomy. 14, 1, 12 p., 157.

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Published

      Aromatic glucosinolate biosynthesis pathway in Barbarea vulgaris and its response to Plutella xylostella infestation

      Liu, T., Zhang, X., Yang, H., Agerbirk, Niels, Qiu, Y., Wang, H., Shen, D., Song, J. & Li, X., 2016, In: Frontiers in Plant Science. 7, 15 p., 83.

      Research output: Contribution to journal › Journal article › Research › peer-review

    23. Published

      A high-density genetic map and QTL mapping of leaf traits and glucosinolates in Barbarea vulgaris

      Liu, T. J., Zhang, Y. J., Agerbirk, Niels, Wang, H. P., Wei, X. C., Song, J. P., He, H. J., Zhao, X. Z., Zhang, X. H. & Li, X. X., 14 May 2019, In: BMC Genomics. 20, 1, p. 1-14 371.

      Research output: Contribution to journal › Journal article › Research › peer-review

    24. Published

      Responses of the flea beetles Phyllotreta nemorum and P. cruciferae to metabolically engineered Arabidopsis thaliana with an altered glucosinolate profile

      Kvist Nielsen, J., Hansen, M. L., Agerbirk, Niels, Petersen, Bent L & Halkier, Barbara Ann, 2001, In: Chemoecology. 11, p. 75-83 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    25. Published

      Ecotypic differentiation of two sympatric chemotypes of Barbarea vulgaris (Brassicaceae) with different biotic resistances

      Heimes, C., Agerbirk, Niels, Sørensen, Helle, van Mölken, T. & Hauser, T. P., 2016, In: Plant Ecology. 217, 9, p. 1055-1068 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    26. Published

      Acceptability of transgenic arabidopsis thaliana with an altered glucosinolate profile to the flea beetles Phyllotreta nemorum and P. cruciferae

      Hansen, M. L., Larsen Petersen, B., Agerbirk, Niels, Halkier, Barbara Ann & Nielsen, J. K., 2001.

      Research output: Contribution to conference › Conference abstract for conference › Research

    27. Published

      Glucosinolate-related glucosides in Alliaria petiolata: sources of variation in the plant and different metabolism in an adapted specialist herbivore, Pieris rapae

      Frisch, T., Agerbirk, Niels, Davis, S., Cipollini, D., Olsen, C. E., Motawie, Mohammed Saddik, Bjarnholt, Nanna & Møller, Birger Lindberg, 2014, In: Journal of Chemical Ecology. 40, 10, p. 1063-1079 17 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    28. Published

      Diversified glucosinolate metabolism: biosynthesis of hydrogen cyanide and of the hydroxynitrile glucoside alliarinoside in relation to sinigrin metabolism in Alliaria petiolata

      Frisch, T., Motawie, Mohammed Saddik, Olsen, C. E., Agerbirk, Niels, Møller, Birger Lindberg & Bjarnholt, Nanna, 2015, In: Frontiers in Plant Science. 6, 16 p., 926.

      Research output: Contribution to journal › Journal article › Research › peer-review

    29. Published

      A tandem array of UDP-glycosyltransferases from the UGT73C subfamily glycosylate sapogenins, forming a spectrum of mono- and bisdesmosidic saponins

      Erthmann, P. Ø., Agerbirk, Niels & Bak, Søren, 2018, In: Plant Molecular Biology. 97, 1-2, p. 37-55 19 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    30. Published

      Polymorphism for novel tetraglycosylated flavonols in an eco-model crucifer, Barbarea vulgaris

      Dalby-Brown, L., Olsen, C. E., Nielsen, J. K. & Agerbirk, Niels, 2011, In: Journal of Agricultural and Food Chemistry. 59, 13, p. 6947-6956 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    31. Published

      Phytoalexins of the crucifer Barbarea vulgaris: Structural profile and correlation with glucosinolate turnover

      Cárdenas, Pablo D., Landtved, J. P., Larsen, S. H., Lindegaard, Nicolai, Wøhlk, S., Jensen, Karen Rysbjerg, Pattison, David, Burow, Meike, Bak, Søren, Crocoll, C. & Agerbirk, Niels, 2023, In: Phytochemistry. 213, 17 p., 113742.

      Research output: Contribution to journal › Journal article › Research › peer-review

    32. Published

      Different geographical distributions of two chemotypes of Barbera vulgaris that differ in resistance to insects and a pathogen

      Christensen, S., Heimes, C., Agerbirk, Niels, Poulsen, V. K., Olsen, C. E. & Hauser, T. P., 2014, In: Journal of Chemical Ecology. 40, 5, p. 491-501 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    33. Published

      Different herbivore responses to two co-occurring chemotypes of the wild crucifer Barbarea vulgaris

      Christensen, S., Enge, S., Jensen, Karen Rysbjerg, Müller, C., Kiær, Lars Pødenphant, Agerbirk, Niels, Heimes, C. & Hauser, T. P., 15 Feb 2019, In: Arthropod-Plant Interactions. 13, 1, p. 19-30 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    34. Published

      The genome sequence of Barbarea vulgaris facilitates the study of ecological biochemistry

      Byrne, S. L., Erthmann, P. Ø., Agerbirk, Niels, Bak, Søren, Hauser, T. P., Nagy, I., Paina, C. & Asp, T., 2017, In: Scientific Reports. 7, 14 p., 40728.

      Research output: Contribution to journal › Journal article › Research › peer-review

    35. Published

      The chemistry of life: laboratory exercises : DSH - Danish-Swedish horticulture science degree programme

      Bukh, C., Tulinius, G. & Agerbirk, Niels, 2002, København: Jordbrugsforlaget. 84 p.

      Research output: Book/Report › Book › Education

    36. Published

      The chemistry of life: laboratory exercises : DSH-Danish-Swedish Horticulture Science Degree Programme

      Bukh, C., Tulinius, G. & Agerbirk, Niels, 2004, 3. ed. København: Samfundslitteratur. 95 p.

      Research output: Book/Report › Book › Education

    37. Published

      The chemistry of life: laboratory exercises: DSH - Danish-Swedish Horticulture Science Degree Programme

      Bukh, C., Aggernæs, G. T. & Agerbirk, Niels, 2003, 2. ed. København: Chemistry Department, The Royal Veterinary and Agricultural University. 95 p.

      Research output: Book/Report › Book › Education

    38. Published

      Glucosinolate structural diversity, identification, chemical synthesis and metabolism in plants

      Blažević, I., Montaut, S., Burčul, F., Olsen, C. E., Burow, Meike, Rollin, P. & Agerbirk, Niels, 2020, In: Phytochemistry. 169, 57 p., 112100.

      Research output: Contribution to journal › Review › Research › peer-review

    39. Published

      Øvelsesvejledning: Biokemi 1

      Bjergegaard, C. & Agerbirk, Niels, 2008, 4 ed. Institut for Grundvidenskab og Miljø, Københavns Universitet.

      Research output: Book/Report › Compendium/lecture notes › Education

    40. Published

      Øvelsesvejledning: Biokemi 1

      Bjergegaard, C. & Agerbirk, Niels, 2010, 6. ed. Institut for Grundvidenskab og Miljø, Københavns Universitet. 125 p.

      Research output: Book/Report › Compendium/lecture notes › Education

    41. Published

      Øvelsesvejledning: Biokemi 1

      Bjergegaard, C. & Agerbirk, Niels, 2009, 5. ed. Institut for Grundvidenskab og Miljø, Københavns Universitet.

      Research output: Book/Report › Compendium/lecture notes › Education

    42. Published

      Øvelsesvejledning: Biokemi 1

      Bjergegaard, C. & Agerbirk, Niels, 2007, 3. ed. København: Institut for Grundvidenskab. 142 p.

      Research output: Book/Report › Compendium/lecture notes › Education

    43. Published

      Kinetic analyses of the transformations of indol-3-ylcarbinol into various indolyls based on micellar electrokinetic capillary chromatography

      Bjergegaard, C., Agerbirk, Niels & Sørensen, H., 1996.

      Research output: Contribution to conference › Poster › Research

    44. Published

      Acylated glucosinolates with diverse acyl groups investigated by high resolution mass spectrometry and infrared multiphoton dissociation

      Bianco, G., Agerbirk, Niels, Losito, I. & Cataldi, T. R. I., 2014, In: Phytochemistry. 100, p. 92-102 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    45. Published

      Kemiske øvelser: for veterinærstuderende

      Bach, E., Larsen, B. D., Jensen, Knud Jørgen, Nielsen, J. K. & Agerbirk, Niels, 2003, 6. ed. København: Samfundslitteratur. 65 p.

      Research output: Book/Report › Book › Education

    46. Published

      The chemistry of life: theoretical exercises: DSH - Danish-Swedish Horticulture Science Degree Programme

      Aggernæs, G. T., Bukh, C. & Agerbirk, Niels, 2003, 2. ed. København: Chemistry Department, The Royal Veterinary and Agricultural University. 50 p.

      Research output: Book/Report › Book › Education

    47. Published

      Erratum: Glucosinolates, flea beetle resistance, and leaf pubescence as taxonomic characters in the genus Barbarea (Brassicaceae) (Phytochemistry (2003) 63 (69-80))

      Agerbirk, Niels, Ørgaard, Marian & Nielsen, J. K., Nov 2003, In: Phytochemistry. 64, 6, p. 1177 1 p.

      Research output: Contribution to journal › Comment/debate › Research › peer-review

    48. Published

      Complex metabolism of aromatic glucosinolates in Pieris rapae caterpillars involving nitrile formation, hydroxylation, demethylation, sulfation, and host plant dependent carboxylic acid formation

      Agerbirk, Niels, Olsen, C. E., Poulsen, E., Jacobsen, Niels & Hansen, Paul Robert, 2010, In: Insect Biochemistry and Molecular Biology. 40, 2, p. 126-137 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    49. Published

      Comparison of glucosinolate diversity in the crucifer tribe Cardamineae and the remaining order Brassicales highlights repetitive evolutionary loss and gain of biosynthetic steps

      Agerbirk, Niels, Hansen, Cecilie Ida Cetti, Kiefer, C., Hauser, T. P., Ørgaard, Marian, Lange, Conny Bruun Asmussen, Cipollini, D. & Koch, M. A., 2021, In: Phytochemistry. 185, 112668.

      Research output: Contribution to journal › Review › Research › peer-review

    50. Published

      Glucosinolate turnover in Brassicales species to an oxazolidin-2-one, formed via the 2-thione and without formation of thioamide

      Agerbirk, Niels, Matthes, A., Erthmann, P. Ø., Ugolini, L., Cinti, S., Lazaridi, E., Nuzillard, J., Mueller, C., Bak, Søren, Rollin, P. & Lazzeri, L., 2018, In: Phytochemistry. 153, p. 79-93

      Research output: Contribution to journal › Journal article › Research › peer-review

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