Phylogenetic analysis of ABCG subfamily proteins in plants: functional clustering and coevolution with ABCGs of pathogens

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Phylogenetic analysis of ABCG subfamily proteins in plants : functional clustering and coevolution with ABCGs of pathogens. / Cho, Chung Hyun; Jang, Sunghoon; Choi, Bae Young; Hong, Daewoong; Choi, Du Seok; Choi, Sera; Kim, Haseong; Han, Seong Kyu; Kim, Sanguk; Kim, Min Sung; Palmgren, Michael; Sohn, Kee Hoon; Yoon, Hwan Su; Lee, Youngsook.

In: Physiologia Plantarum, Vol. 172, No. 3, 2021, p. 1422-1438.

Research output: Contribution to journalJournal articleResearchpeer-review

Harvard

Cho, CH, Jang, S, Choi, BY, Hong, D, Choi, DS, Choi, S, Kim, H, Han, SK, Kim, S, Kim, MS, Palmgren, M, Sohn, KH, Yoon, HS & Lee, Y 2021, 'Phylogenetic analysis of ABCG subfamily proteins in plants: functional clustering and coevolution with ABCGs of pathogens', Physiologia Plantarum, vol. 172, no. 3, pp. 1422-1438. https://doi.org/10.1111/ppl.13052

APA

Cho, C. H., Jang, S., Choi, B. Y., Hong, D., Choi, D. S., Choi, S., Kim, H., Han, S. K., Kim, S., Kim, M. S., Palmgren, M., Sohn, K. H., Yoon, H. S., & Lee, Y. (2021). Phylogenetic analysis of ABCG subfamily proteins in plants: functional clustering and coevolution with ABCGs of pathogens. Physiologia Plantarum, 172(3), 1422-1438. https://doi.org/10.1111/ppl.13052

Vancouver

Cho CH, Jang S, Choi BY, Hong D, Choi DS, Choi S et al. Phylogenetic analysis of ABCG subfamily proteins in plants: functional clustering and coevolution with ABCGs of pathogens. Physiologia Plantarum. 2021;172(3):1422-1438. https://doi.org/10.1111/ppl.13052

Author

Cho, Chung Hyun ; Jang, Sunghoon ; Choi, Bae Young ; Hong, Daewoong ; Choi, Du Seok ; Choi, Sera ; Kim, Haseong ; Han, Seong Kyu ; Kim, Sanguk ; Kim, Min Sung ; Palmgren, Michael ; Sohn, Kee Hoon ; Yoon, Hwan Su ; Lee, Youngsook. / Phylogenetic analysis of ABCG subfamily proteins in plants : functional clustering and coevolution with ABCGs of pathogens. In: Physiologia Plantarum. 2021 ; Vol. 172, No. 3. pp. 1422-1438.

Bibtex

@article{3b134e8b711946a490e053812a049e76,
title = "Phylogenetic analysis of ABCG subfamily proteins in plants: functional clustering and coevolution with ABCGs of pathogens",
abstract = "ABCG subfamily proteins are highly enriched in terrestrial plants. Many of these proteins secrete secondary metabolites that repel or inhibit pathogens. To establish why the ABCG subfamily proteins proliferated extensively during evolution, we constructed phylogenetic trees from a broad range of eukaryotic organisms. ABCG proteins were massively duplicated in land plants and in oomycetes, a group of agronomically important plant pathogens, which prompted us to hypothesize that plant and pathogen ABCGs coevolved. Supporting this hypothesis, full-size ABCGs in host plants (Arabidopsis thaliana and Glycine max) and their pathogens (Hyaloperonospora arabidopsidis and Phytophthora sojae, respectively) had similar divergence times and patterns. Furthermore, generalist pathogens with broad ranges of host plants have diversified more ABCGs than their specialist counterparts. The hypothesis was further tested using an example pair of ABCGs that first diverged during multiplication in a host plant and its pathogen: AtABCG31 of A. thaliana and HpaP802307 of H. arabidopsidis. AtABCG31 expression was activated following infection with H. arabidopsidis, and disrupting AtABCG31 led to increased susceptibility to H. arabidopsidis. Together, our results suggest that ABCG genes in plants and their oomycete pathogens coevolved in an arms race, to extrude secondary metabolites involved in the plant's defense response against pathogens.",
author = "Cho, {Chung Hyun} and Sunghoon Jang and Choi, {Bae Young} and Daewoong Hong and Choi, {Du Seok} and Sera Choi and Haseong Kim and Han, {Seong Kyu} and Sanguk Kim and Kim, {Min Sung} and Michael Palmgren and Sohn, {Kee Hoon} and Yoon, {Hwan Su} and Youngsook Lee",
year = "2021",
doi = "10.1111/ppl.13052",
language = "English",
volume = "172",
pages = "1422--1438",
journal = "Physiologia Plantarum",
issn = "0031-9317",
publisher = "Wiley-Blackwell",
number = "3",

}

RIS

TY - JOUR

T1 - Phylogenetic analysis of ABCG subfamily proteins in plants

T2 - functional clustering and coevolution with ABCGs of pathogens

AU - Cho, Chung Hyun

AU - Jang, Sunghoon

AU - Choi, Bae Young

AU - Hong, Daewoong

AU - Choi, Du Seok

AU - Choi, Sera

AU - Kim, Haseong

AU - Han, Seong Kyu

AU - Kim, Sanguk

AU - Kim, Min Sung

AU - Palmgren, Michael

AU - Sohn, Kee Hoon

AU - Yoon, Hwan Su

AU - Lee, Youngsook

PY - 2021

Y1 - 2021

N2 - ABCG subfamily proteins are highly enriched in terrestrial plants. Many of these proteins secrete secondary metabolites that repel or inhibit pathogens. To establish why the ABCG subfamily proteins proliferated extensively during evolution, we constructed phylogenetic trees from a broad range of eukaryotic organisms. ABCG proteins were massively duplicated in land plants and in oomycetes, a group of agronomically important plant pathogens, which prompted us to hypothesize that plant and pathogen ABCGs coevolved. Supporting this hypothesis, full-size ABCGs in host plants (Arabidopsis thaliana and Glycine max) and their pathogens (Hyaloperonospora arabidopsidis and Phytophthora sojae, respectively) had similar divergence times and patterns. Furthermore, generalist pathogens with broad ranges of host plants have diversified more ABCGs than their specialist counterparts. The hypothesis was further tested using an example pair of ABCGs that first diverged during multiplication in a host plant and its pathogen: AtABCG31 of A. thaliana and HpaP802307 of H. arabidopsidis. AtABCG31 expression was activated following infection with H. arabidopsidis, and disrupting AtABCG31 led to increased susceptibility to H. arabidopsidis. Together, our results suggest that ABCG genes in plants and their oomycete pathogens coevolved in an arms race, to extrude secondary metabolites involved in the plant's defense response against pathogens.

AB - ABCG subfamily proteins are highly enriched in terrestrial plants. Many of these proteins secrete secondary metabolites that repel or inhibit pathogens. To establish why the ABCG subfamily proteins proliferated extensively during evolution, we constructed phylogenetic trees from a broad range of eukaryotic organisms. ABCG proteins were massively duplicated in land plants and in oomycetes, a group of agronomically important plant pathogens, which prompted us to hypothesize that plant and pathogen ABCGs coevolved. Supporting this hypothesis, full-size ABCGs in host plants (Arabidopsis thaliana and Glycine max) and their pathogens (Hyaloperonospora arabidopsidis and Phytophthora sojae, respectively) had similar divergence times and patterns. Furthermore, generalist pathogens with broad ranges of host plants have diversified more ABCGs than their specialist counterparts. The hypothesis was further tested using an example pair of ABCGs that first diverged during multiplication in a host plant and its pathogen: AtABCG31 of A. thaliana and HpaP802307 of H. arabidopsidis. AtABCG31 expression was activated following infection with H. arabidopsidis, and disrupting AtABCG31 led to increased susceptibility to H. arabidopsidis. Together, our results suggest that ABCG genes in plants and their oomycete pathogens coevolved in an arms race, to extrude secondary metabolites involved in the plant's defense response against pathogens.

U2 - 10.1111/ppl.13052

DO - 10.1111/ppl.13052

M3 - Journal article

C2 - 31828796

AN - SCOPUS:85083096715

VL - 172

SP - 1422

EP - 1438

JO - Physiologia Plantarum

JF - Physiologia Plantarum

SN - 0031-9317

IS - 3

ER -

ID: 245000624