Sebastian Marquardt
Associate Professor - Promotion Programme
Section for Molecular Plant Biology
Thorvaldsensvej 40, 1871 Frederiksberg C
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Winter fields antisense RNAs to kick off flowering
Jin, Yu & Marquardt, Sebastian, 2021, In: Genes and Development. 38, 11-12, p. 785-786 2 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Transcriptional read-through of the long non-coding RNA SVALKA governs plant cold acclimation
Kindgren, P. R., Ard, R., Ivanov, M. & Marquardt, Sebastian, 2018, In: Nature Communications. 9, p. 1-11 4561.Research output: Contribution to journal › Journal article › Research › peer-review
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Transcription-driven chromatin repression of Intragenic transcription start sites
Nielsen, M., Ard, R., Leng, Xueyuan, Ivanov, M., Kindgren, P. R., Pelechano, V. & Marquardt, Sebastian, 1 Feb 2019, In: PLOS Genetics. 15, 2, p. 1-33 e1007969.Research output: Contribution to journal › Journal article › Research › peer-review
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Transcript isoform sequencing reveals widespread promoter-proximal transcriptional termination in Arabidopsis
Thomas, Quentin, Ard, R., Liu, J., Li, B., Wang, J., Pelechano, V. & Marquardt, Sebastian, 2020, In: Nature Communications. 11, 1, p. 1-15Research output: Contribution to journal › Journal article › Research › peer-review
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TrancriptomeReconstructoR: data-driven annotation of complex transcriptomes
Ivanov, M., Sandelin, Albin Gustav & Marquardt, Sebastian, 2021, In: BMC Bioinformatics. 22, 15 p., 290.Research output: Contribution to journal › Journal article › Research › peer-review
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The Hda1 histone deacetylase limits divergent non-coding transcription and restricts transcription initiation frequency
Gowthaman, U., Ivanov, M., Schwarz, Isabel Aimèe, Patel, H. P., Müller, N. A., Garcia Pichardo, Desire, Lenstra, T. L. & Marquardt, Sebastian, 2021, In: EMBO Journal. 40, 23, 16 p., 108903.Research output: Contribution to journal › Journal article › Research › peer-review
Targeted 3' processing of antisense transcripts triggers Arabidopsis FLC chromatin silencing
Liu, F., Marquardt, Sebastian, Lister, C., Swiezewski, S. & Dean, C., 2010, In: Science (New York, N.Y.). 327, 5961, p. 94-7 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
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R-loops at microRNA encoding loci promote co-transcriptional processing of pri-miRNAs in plants
Gonzalo, L., Tossolini, I., Gulanicz, T., Cambiagno, D. A., Kasprowicz-Maluski, A., Smolinski, D. J., Mammarella, M. F., Ariel, F. D., Marquardt, Sebastian, Szweykowska-Kulinska, Z., Jarmolowski, A. & Manavella, P. A., 2022, In: Nature Plants. 8, 4, p. 402-418 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Partial loss-of-function alleles reveal a role for GNOM in auxin transport-related, post-embryonic development of Arabidopsis
Geldner, N., Richter, S., Vieten, A., Marquardt, Sebastian, Torres-Ruiz, R. A., Mayer, U. & Jürgens, G., Jan 2004, In: Development (Cambridge, England). 131, 2, p. 389-400 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Organismal benefits of transcription speed control at gene boundaries
Leng, Xueyuan, Ivanov, M., Kindgren, P., Malik, I., Thieffry, A., Brodersen, Peter, Sandelin, Albin Gustav, Kaplan, C. D. & Marquardt, Sebastian, 2020, In: EMBO Reports. 21, 4, 16 p., e49315.Research output: Contribution to journal › Journal article › Research › peer-review
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Novel functions of plant cyclin-dependent kinase inhibitors, ICK1/KRP1, can act non-cell-autonomously and inhibit entry into mitosis
Weinl, C., Marquardt, Sebastian, Kuijt, S. J. H., Nowack, M. K., Jakoby, M. J., Hülskamp, M. & Schnittger, A., Jun 2005, In: Plant Cell. 17, 6, p. 1704-22 19 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Native elongation transcript sequencing reveals temperature dependent dynamics of nascent RNAPII transcription in Arabidopsis
Kindgren, P., Ivanov, M. & Marquardt, Sebastian, 2020, In: Nucleic Acids Symposium Series. 48, 5, p. 2332-2347 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
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LncRNA FLAIL affects alternative splicing and represses flowering in Arabidopsis
Jin, Yu, Ivanov, M., Dittrich, A. N., Nelson, A. D. L. & Marquardt, Sebastian, 2023, In: EMBO Journal. 42, 11, 21 p., e110921.Research output: Contribution to journal › Journal article › Research › peer-review
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Light-Dependent Translation Change of Arabidopsis psbA Correlates with RNA Structure Alterations at the Translation Initiation Region
Gawroński, P., Enroth, Christel Hougård, Kindgren, P., Marquardt, Sebastian, Karpiński, S., Leister, D., Jensen, Poul Erik, Vinther, Jeppe & Scharff, L. B., 2021, In: Cells. 10, 2, 22 p., 322.Research output: Contribution to journal › Journal article › Research › peer-review
Kinetic competition between RNA Polymerase II and Sen1-dependent transcription termination
Hazelbaker, D. Z., Marquardt, Sebastian, Wlotzka, W. & Buratowski, S., 2013, In: Molecular Cell. 49, 1, p. 55-66 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Histone chaperone ASF1 mediates H3.3-H4 deposition in Arabidopsis
Zhong, Z., Wang, Y., Wang, M., Yang, F., Thomas, Quentin, Xue, Y., Zhang, Y., Liu, W., Jami-Alahmadi, Y., Xu, L., Feng, S., Marquardt, Sebastian, Wohlschlegel, J. A., Ausin, I. & Jacobsen, S. E., 2022, In: Nature Communications. 13, 15 p., 6970.Research output: Contribution to journal › Journal article › Research › peer-review
Functional consequences of splicing of the antisense transcript COOLAIR on FLC transcription
Marquardt, Sebastian, Raitskin, O., Wu, Z., Liu, F., Sun, Q. & Dean, C., 2014, In: Molecular Cell. 54, 1, p. 156-165 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Functional Variation in the Non-Coding Genome: Molecular Implications for Food Security
Gullotta, Giorgio, Korte, A. & Marquardt, Sebastian, 2023, In: Journal of Experimental Botany. 74, 7, p. 2338–2351 14 p.Research output: Contribution to journal › Review › Research › peer-review
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From Single Cells to Flowers – Biological Complexity Driving Plant Reproductive Development
Schwarz, Isabel Aimèe, Neumann, M., Vega, R., Xu, X., Cornaro, L., Colombo, L., Vernoux, T., Xu, J., Marquardt, Sebastian & Kaufmann, K., 2021, Preprints.org.Research output: Working paper › Preprint › Research
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Emerging properties and functional consequences of noncoding transcription
Ard, R., Allshire, R. C. & Marquardt, Sebastian, 2017, In: Genetics (Print). 207, 2, p. 357-367 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Efficient termination of nuclear lncRNA transcription promotes mitochondrial genome maintenance
du Mee, D. J. M., Ivanov, M., Parker, J. P., Buratowski, S. & Marquardt, Sebastian, 5 Mar 2018, In: eLife. 7, e31989.Research output: Contribution to journal › Journal article › Research › peer-review
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Dual sgRNA-based Targeted Deletion of Large Genomic Regions and Isolation of Heritable Cas9-free Mutants in Arabidopsis
Jin, Yu & Marquardt, Sebastian, 2020, In: Bio-protocol. 10, 20, 17 p., 3796.Research output: Contribution to journal › Journal article › Research › peer-review
Distinct RNA degradation pathways and 3' extensions of yeast non-coding RNA species
Marquardt, Sebastian, Hazelbaker, D. Z. & Buratowski, S., May 2011, In: Transcription. 2, 3, p. 145-154 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DNA Processing in the Context of Noncoding Transcription
Gowthaman, U., Garcia Pichardo, Desire, Jin, Yu, Schwarz, Isabel Aimèe & Marquardt, Sebastian, 2020, In: Trends in Biochemical Sciences. 45, 12, p. 1009-1021Research output: Contribution to journal › Journal article › Research › peer-review
Cullin 4-ring finger-ligase plays a key role in the control of endoreplication cycles in Arabidopsis trichomes
Roodbarkelari, F., Bramsiepe, J., Weinl, C., Marquardt, Sebastian, Novák, B., Jakoby, M. J., Lechner, E., Genschik, P. & Schnittger, A., 2010, In: Proceedings of the National Academy of Sciences of the United States of America. 107, 34, p. 15275-15280 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 122741632
Most downloads
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332
downloads
Transcription-driven chromatin repression of Intragenic transcription start sites
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
280
downloads
Transcriptional read-through of the long non-coding RNA SVALKA governs plant cold acclimation
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
154
downloads
Organismal benefits of transcription speed control at gene boundaries
Research output: Contribution to journal › Journal article › Research › peer-review
Published