Sebastian Marquardt

Sebastian Marquardt

Associate Professor - Promotion Programme

ORCID: 0000-0003-1709-2717

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  1. Published

    Efficient termination of nuclear lncRNA transcription promotes mitochondrial genome maintenance

    du Mee, D. J. M., Ivanov, M., Parker, J. P., Buratowski, S. & Marquardt, Sebastian, 5 Mar 2018, In: eLife. 7, e31989.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Histone chaperone ASF1 mediates H3.3-H4 deposition in Arabidopsis

    Zhong, Z., Wang, Y., Wang, M., Yang, F., Thomas, Quentin, Xue, Y., Zhang, Y., Liu, W., Jami-Alahmadi, Y., Xu, L., Feng, S., Marquardt, Sebastian, Wohlschlegel, J. A., Ausin, I. & Jacobsen, S. E., 2022, In: Nature Communications. 13, 15 p., 6970.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Novel functions of plant cyclin-dependent kinase inhibitors, ICK1/KRP1, can act non-cell-autonomously and inhibit entry into mitosis

    Weinl, C., Marquardt, Sebastian, Kuijt, S. J. H., Nowack, M. K., Jakoby, M. J., Hülskamp, M. & Schnittger, A., Jun 2005, In: Plant Cell. 17, 6, p. 1704-22 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Transcript isoform sequencing reveals widespread promoter-proximal transcriptional termination in Arabidopsis

    Thomas, Quentin, Ard, R., Liu, J., Li, B., Wang, J., Pelechano, V. & Marquardt, Sebastian, 2020, In: Nature Communications. 11, 1, p. 1-15

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    From Single Cells to Flowers – Biological Complexity Driving Plant Reproductive Development

    Schwarz, Isabel Aimèe, Neumann, M., Vega, R., Xu, X., Cornaro, L., Colombo, L., Vernoux, T., Xu, J., Marquardt, Sebastian & Kaufmann, K., 2021, Preprints.org.

    Research output: Working paper › Preprint › Research

  6. Cullin 4-ring finger-ligase plays a key role in the control of endoreplication cycles in Arabidopsis trichomes

    Roodbarkelari, F., Bramsiepe, J., Weinl, C., Marquardt, Sebastian, Novák, B., Jakoby, M. J., Lechner, E., Genschik, P. & Schnittger, A., 2010, In: Proceedings of the National Academy of Sciences of the United States of America. 107, 34, p. 15275-15280 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Transcription-driven chromatin repression of Intragenic transcription start sites

    Nielsen, M., Ard, R., Leng, Xueyuan, Ivanov, M., Kindgren, P. R., Pelechano, V. & Marquardt, Sebastian, 1 Feb 2019, In: PLOS Genetics. 15, 2, p. 1-33 e1007969.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. A chromatin-based mechanism for limiting divergent noncoding transcription

    Marquardt, Sebastian, Escalante-Chong, R., Pho, N., Wang, J., Churchman, L. S., Springer, M. & Buratowski, S., 2014, In: Cell. 157, 7, p. 1712-23 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Additional targets of the Arabidopsis autonomous pathway members, FCA and FY

    Marquardt, Sebastian, Boss, P. K., Hadfield, J. & Dean, C., 2006, In: Journal of Experimental Botany. Flowering Newsletter. 57, 13, p. 3379-86 8 p.

    Research output: Contribution to journal › Review › Research › peer-review

  10. Published

    A ribose world: current status and future challenges of plant RNA biology

    Marquardt, Sebastian & Manavella, P. A., 2023, In: Journal of Experimental Botany. 74, 7, p. 2203-2207 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Distinct RNA degradation pathways and 3' extensions of yeast non-coding RNA species

    Marquardt, Sebastian, Hazelbaker, D. Z. & Buratowski, S., May 2011, In: Transcription. 2, 3, p. 145-154 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Functional consequences of splicing of the antisense transcript COOLAIR on FLC transcription

    Marquardt, Sebastian, Raitskin, O., Wu, Z., Liu, F., Sun, Q. & Dean, C., 2014, In: Molecular Cell. 54, 1, p. 156-165 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Cotranscriptional RNA processing and modification in plants

    Marquardt, Sebastian, Petrillo, E. & Manavella, P. A., 2023, In: The Plant Cell. 35, 6, p. 1654-1670

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Altered interactions within FY/AtCPSF complexes required for Arabidopsis FCA-mediated chromatin silencing

    Manzano, D., Marquardt, Sebastian, Jones, A. M. E., Bäurle, I., Liu, F. & Dean, C., 2009, In: Proceedings of the National Academy of Sciences of the United States of America. 106, 21, p. 8772-7 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Targeted 3' processing of antisense transcripts triggers Arabidopsis FLC chromatin silencing

    Liu, F., Marquardt, Sebastian, Lister, C., Swiezewski, S. & Dean, C., 2010, In: Science (New York, N.Y.). 327, 5961, p. 94-7 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    A G(enomic)P(ositioning)S(ystem) for Plant RNAPII Transcription

    Leng, Xueyuan, Thomas, Quentin, Rasmussen, S. H. & Marquardt, Sebastian, 2020, In: Trends in Plant Science. 25, 8, p. 744-764

    Research output: Contribution to journal › Review › Research › peer-review

  17. Published

    Organismal benefits of transcription speed control at gene boundaries

    Leng, Xueyuan, Ivanov, M., Kindgren, P., Malik, I., Thieffry, A., Brodersen, Peter, Sandelin, Albin Gustav, Kaplan, C. D. & Marquardt, Sebastian, 2020, In: EMBO Reports. 21, 4, 16 p., e49315.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Transcriptional read-through of the long non-coding RNA SVALKA governs plant cold acclimation

    Kindgren, P. R., Ard, R., Ivanov, M. & Marquardt, Sebastian, 2018, In: Nature Communications. 9, p. 1-11 4561.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Native elongation transcript sequencing reveals temperature dependent dynamics of nascent RNAPII transcription in Arabidopsis

    Kindgren, P., Ivanov, M. & Marquardt, Sebastian, 2020, In: Nucleic Acids Symposium Series. 48, 5, p. 2332-2347 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Dual sgRNA-based Targeted Deletion of Large Genomic Regions and Isolation of Heritable Cas9-free Mutants in Arabidopsis

    Jin, Yu & Marquardt, Sebastian, 2020, In: Bio-protocol. 10, 20, 17 p., 3796.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    LncRNA FLAIL affects alternative splicing and represses flowering in Arabidopsis

    Jin, Yu, Ivanov, M., Dittrich, A. N., Nelson, A. D. L. & Marquardt, Sebastian, 2023, In: EMBO Journal. 42, 11, 21 p., e110921.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Winter fields antisense RNAs to kick off flowering

    Jin, Yu & Marquardt, Sebastian, 2021, In: Genes and Development. 38, 11-12, p. 785-786 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    TrancriptomeReconstructoR: data-driven annotation of complex transcriptomes

    Ivanov, M., Sandelin, Albin Gustav & Marquardt, Sebastian, 2021, In: BMC Bioinformatics. 22, 15 p., 290.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Kinetic competition between RNA Polymerase II and Sen1-dependent transcription termination

    Hazelbaker, D. Z., Marquardt, Sebastian, Wlotzka, W. & Buratowski, S., 2013, In: Molecular Cell. 49, 1, p. 55-66 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Functional Variation in the Non-Coding Genome: Molecular Implications for Food Security

    Gullotta, Giorgio, Korte, A. & Marquardt, Sebastian, 2023, In: Journal of Experimental Botany. 74, 7, p. 2338–2351 14 p.

    Research output: Contribution to journal › Review › Research › peer-review

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