Niels Agerbirk

Niels Agerbirk

Associate Professor

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    ORCID: 0000-0003-4670-8330

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    1. Published

      1,4-Dimethoxyglucobrassicin in Barbarea and 4-Hydroxyglucobrassicin in Arabidopsis and Brassica

      Agerbirk, Niels, Petersen, Bent L, Olsen, C. E., Halkier, Barbara Ann & Kvist Nielsen, J., 2001, In: Journal of Agricultural and Food Chemistry. 49, 3, p. 1502-1507 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    2. Published

      Sinapis phylogeny and evolution of glucosinolates and specific nitrile degrading enzymes

      Agerbirk, Niels, Warwick, S. I., Hansen, Paul Robert & Olsen, C. E., 2008, In: Phytochemistry. 69, 17, p. 2937-2949 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      A common pathway for metabolism of 4-hydroxybenzylglucosinolate in Pieris and Anthocaris (Lepidoptera: Pieridae)

      Agerbirk, Niels, Müller, C., Olsen, C. E. & Chew, F. S., 2006, In: Biochemical Systematics and Ecology. 34, 3, p. 189-198 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. Published

      A high-density genetic map and QTL mapping of leaf traits and glucosinolates in Barbarea vulgaris

      Liu, T. J., Zhang, Y. J., Agerbirk, Niels, Wang, H. P., Wei, X. C., Song, J. P., He, H. J., Zhao, X. Z., Zhang, X. H. & Li, X. X., 14 May 2019, In: BMC Genomics. 20, 1, p. 1-14 371.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      A recycling pathway for cyanogenic glycosides evidenced by the comparative metabolic profiling in three cyanogenic plant species

      Picmanova, M., Neilson, Elizabeth Heather Jakobsen, Motawie, Mohammed Saddik, Olsen, C. E., Agerbirk, Niels, Gray, C. J., Flitsch, S., Meier, S., Silvestro, D., Jørgensen, Kirsten, Sánchez Pérez, R., Møller, Birger Lindberg & Bjarnholt, Nanna, 2015, In: Biochemical Journal. 469, 3, p. 375-389 15 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      A tandem array of UDP-glycosyltransferases from the UGT73C subfamily glycosylate sapogenins, forming a spectrum of mono- and bisdesmosidic saponins

      Erthmann, P. Ø., Agerbirk, Niels & Bak, Søren, 2018, In: Plant Molecular Biology. 97, 1-2, p. 37-55 19 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      A ¤saponin correlated with variable resistance of Barbarea vulgaris to the diamondback moth Plutella xylostella

      Agerbirk, Niels, Olsen, C. E., Bibby, B. M., Frandsen, H. O., Brown, L. D., Nielsen, J. K. & Renwick, J. A. A., 2003, In: Journal of Chemical Ecology. 29, 6, p. 1417-1433 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. Published

      Acceptability of transgenic arabidopsis thaliana with an altered glucosinolate profile to the flea beetles Phyllotreta nemorum and P. cruciferae

      Hansen, M. L., Larsen Petersen, B., Agerbirk, Niels, Halkier, Barbara Ann & Nielsen, J. K., 2001.

      Research output: Contribution to conference › Conference abstract for conference › Research

    9. Published

      Acylated glucosinolates with diverse acyl groups investigated by high resolution mass spectrometry and infrared multiphoton dissociation

      Bianco, G., Agerbirk, Niels, Losito, I. & Cataldi, T. R. I., 2014, In: Phytochemistry. 100, p. 92-102 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      Analysis of degradation products of indole glucosinolates by capillary electrophoresis

      Agerbirk, Niels & Sørensen, H., 1997, In: G.C.I.R.C. bulletin. 13, p. 80-83 4 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. Published

      Ancient biosynthesis in an oil crop: Glucosinulate profiles in Limnanthes alba and its relatives (Limnanthaceae, Brassicales)

      Agerbirk, Niels, Pattison, David, Mandáková, T., Lysak, M. A., Montaut, S. & Stærk, Dan, 2022, In: Journal of Agricultural and Food Chemistry. 70, p. 1134-1147

      Research output: Contribution to journal › Journal article › Research › peer-review

    12. Published

      Aromatic glucosinolate biosynthesis pathway in Barbarea vulgaris and its response to Plutella xylostella infestation

      Liu, T., Zhang, X., Yang, H., Agerbirk, Niels, Qiu, Y., Wang, H., Shen, D., Song, J. & Li, X., 2016, In: Frontiers in Plant Science. 7, 15 p., 83.

      Research output: Contribution to journal › Journal article › Research › peer-review

    13. Published

      Aurora-larvens korte liv fulgt i en vindueskarm: nogle iagttagelser af larvens adfærd og udvikling

      Agerbirk, Niels & Jørgensen, Kirsten, 2008, In: Lepidoptera. 9, 6, p. 176-180 5 p.

      Research output: Contribution to journal › Journal article › Research

    14. Published

      Biochemical strategies for control of cabbage whites (Pieris spp.) and the diamondback moth

      Agerbirk, Niels & Olsen, C. E., 2003. 1 p.

      Research output: Contribution to conference › Paper › Research

    15. Published

      Biokemiske laboratorieprojekter til studieretningsprojekter for gymnasieelever

      Olsen, S. & Agerbirk, Niels, 2007, Frederiksberg: Institut for Grundvidenskab, Det Biovidenskabelige Fakultet. 38 p.

      Research output: Book/Report › Compendium/lecture notes › Education

    16. Published

      Characterization of Arabidopsis CYP79C1 and CYP79C2 by Glucosinolate Pathway Engineering in Nicotiana benthamiana Shows Substrate Specificity Toward a Range of Aliphatic and Aromatic Amino Acids

      Wang, Cuiwei, Dissing, M. M., Agerbirk, Niels, Crocoll, C. & Halkier, Barbara Ann, 2020, In: Frontiers in Plant Science. 11, 13 p., 57.

      Research output: Contribution to journal › Journal article › Research › peer-review

    17. Published

      Characterization of transgenic Arabidopsis thaliana with metabolically engineered high levels of p-hydroxybenzylglucosinolate

      Petersen, Bent L, Andreasson, E., Bak, Søren, Agerbirk, Niels & Halkier, Barbara Ann, 2001, In: Planta. 212, p. 612-618

      Research output: Contribution to journal › Journal article › Research › peer-review

    18. Published

      Comparison of glucosinolate diversity in the crucifer tribe Cardamineae and the remaining order Brassicales highlights repetitive evolutionary loss and gain of biosynthetic steps

      Agerbirk, Niels, Hansen, Cecilie Ida Cetti, Kiefer, C., Hauser, T. P., Ørgaard, Marian, Lange, Conny Bruun Asmussen, Cipollini, D. & Koch, M. A., 2021, In: Phytochemistry. 185, 112668.

      Research output: Contribution to journal › Review › Research › peer-review

    19. Published

      Compendium for the chemistry of life

      Agerbirk, Niels, 2005, 1. ed. ed. Copenhagen: Center for Skov, Landskab og Planlægning/Københavns Universitet. 10 p.

      Research output: Book/Report › Compendium/lecture notes › Education

    20. Published

      Complex metabolism of aromatic glucosinolates in Pieris rapae caterpillars involving nitrile formation, hydroxylation, demethylation, sulfation, and host plant dependent carboxylic acid formation

      Agerbirk, Niels, Olsen, C. E., Poulsen, E., Jacobsen, Niels & Hansen, Paul Robert, 2010, In: Insect Biochemistry and Molecular Biology. 40, 2, p. 126-137 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    21. Published

      Derivatization of isothiocyanates and their reactive adducts for chromatographic analysis

      Agerbirk, Niels, De Nicola, G. R., Olsen, C. E., Mueller, C. & Iori, R., 2015, In: Phytochemistry. 118, p. 109-115 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Published

      Development and application of a virus-induced gene silencing protocol for the study of gene function in narrow-leafed lupin

      Mancinotti, Davide, Rodriguez, M. C., Frick, Karen Michiko, Dueholm, B., Jepsen, D. G., Agerbirk, Niels & Geu-Flores, Fernando, 2021, In: Plant Methods. 17, 1, 13 p., 131.

      Research output: Contribution to journal › Journal article › Research › peer-review

    23. Published

      Different geographical distributions of two chemotypes of Barbera vulgaris that differ in resistance to insects and a pathogen

      Christensen, S., Heimes, C., Agerbirk, Niels, Poulsen, V. K., Olsen, C. E. & Hauser, T. P., 2014, In: Journal of Chemical Ecology. 40, 5, p. 491-501 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    24. Published

      Different herbivore responses to two co-occurring chemotypes of the wild crucifer Barbarea vulgaris

      Christensen, S., Enge, S., Jensen, Karen Rysbjerg, Müller, C., Kiær, Lars Pødenphant, Agerbirk, Niels, Heimes, C. & Hauser, T. P., 15 Feb 2019, In: Arthropod-Plant Interactions. 13, 1, p. 19-30 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    25. Published

      Diversified glucosinolate metabolism: biosynthesis of hydrogen cyanide and of the hydroxynitrile glucoside alliarinoside in relation to sinigrin metabolism in Alliaria petiolata

      Frisch, T., Motawie, Mohammed Saddik, Olsen, C. E., Agerbirk, Niels, Møller, Birger Lindberg & Bjarnholt, Nanna, 2015, In: Frontiers in Plant Science. 6, 16 p., 926.

      Research output: Contribution to journal › Journal article › Research › peer-review

    26. Published

      Ecotypic differentiation of two sympatric chemotypes of Barbarea vulgaris (Brassicaceae) with different biotic resistances

      Heimes, C., Agerbirk, Niels, Sørensen, Helle, van Mölken, T. & Hauser, T. P., 2016, In: Plant Ecology. 217, 9, p. 1055-1068 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    27. Published

      En biokemisk arv fra en fælles stamfar til hvidsværmerslægterne Pieris og Anthocaris

      Agerbirk, Niels, 2006, In: Lepidoptera. 9, 1, p. 11-15 5 p.

      Research output: Contribution to journal › Journal article › Communication

    28. Published

      Engineering and optimization of the 2-phenylethylglucosinolate production in Nicotiana benthamiana by combining biosynthetic genes from Barbarea vulgaris and Arabidopsis thaliana

      Wang, Cuiwei, Crocoll, C., Agerbirk, Niels & Halkier, Barbara Ann, 2021, In: Plant Journal. 106, 4, p. 978-992

      Research output: Contribution to journal › Journal article › Research › peer-review

    29. Published

      Erratum: Glucosinolates, flea beetle resistance, and leaf pubescence as taxonomic characters in the genus Barbarea (Brassicaceae) (Phytochemistry (2003) 63 (69-80))

      Agerbirk, Niels, Ørgaard, Marian & Nielsen, J. K., Nov 2003, In: Phytochemistry. 64, 6, p. 1177 1 p.

      Research output: Contribution to journal › Comment/debate › Research › peer-review

    30. Published

      Essentials in the acquisition, interpretation, and reporting of plant metabolite profiles

      Çiçek, S. S., Mangoni, A., Hanschen, F. S., Agerbirk, Niels & Zidorn, C., 2024, In: Phytochemistry. 220, 16 p., 114004.

      Research output: Contribution to journal › Review › Research › peer-review

    31. Published

      Evolution of glucosinolates in Sinapis & Brassica

      Agerbirk, Niels, Warwick, S. I. & Olsen, C. E., 2008.

      Research output: Contribution to conference › Poster › Research

    32. Published

      Exercises in enzymology and experimental biochemistry: accuracy and precision in enzymology, activity coefficients in enzymology, macromolecule-ligand dissociation constants

      Agerbirk, Niels, 2008, Department of Natural Sciences, University of Copenhagen. 34 p.

      Research output: Book/Report › Compendium/lecture notes › Education

    33. Published

      Expression patterns, molecular markers and genetic diversity of insect-susceptible and resistant Barbarea genotypes by comparative trnscriptome analysis

      Zhang, X., Liu, T., Wei, X., Qiu, Y., Song, J., Wang, H., Shen, D., Agerbirk, Niels & Li, X., 2015, In: B M C Genomics. 16, 16 p., 486.

      Research output: Contribution to journal › Journal article › Research › peer-review

    34. Published

      Flower vs. leaf feeding by Pieris brassicae: glucosinolate-rich flower tissues are preferred and sustain higher growth rate

      Smallegange, R. C., Loon, J. J. A. V., Blatt, S. E., Harvey, J. A., Agerbirk, Niels & Dicke, M., 2007, In: Journal of Chemical Ecology. 33, 10, p. 1831-1844 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    35. Published

      Flowers of Brassica nigra have high glucosinolate levels and are the preferred food of Pieris brassicae caterpillars

      van Loon, J. J. A., Smallegange, R. C., Blatt, S. E., Harvey, J. A., Agerbirk, Niels & Dicke, M., 2006, Glucosinolate biology, chemistry and biochemistry and its application to human health and agriculture. Max Planck Institute for Chemical Ecology, 1 p.

      Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

    36. Published

      Glucosinolate diversity within a phylogenetic framework of the tribe Cardamineae (Brassicaceae) unraveled with HPLC-MS/MS and NMR-based analytical distinction of 70 desulfoglucosinolates

      Olsen, C. E., Huang, X., Hansen, Cecilie Ida Cetti, Cipollini, D., Ørgaard, Marian, Matthes, A., Geu-Flores, Fernando, Koch, M. A. & Agerbirk, Niels, 2016, In: Phytochemistry. 132, p. 33-56 24 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    37. Published

      Glucosinolate hydrolysis products in the crucifer Barbarea vulgaris include a thiazolidine-2-one from a specific phenolic isomer as well as oxazolidine-2-thiones

      Agerbirk, Niels & Olsen, C. E., 2015, In: Phytochemistry. 115, p. 143-151 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    38. Published

      Glucosinolate profiles and phylogeny in Barbarea compared to other tribe Cardamineae (Brassicaceae) and Reseda (Resedaceae), based on a library of ion trap HPLC-MS/MS data of reference desulfoglucosinolates

      Agerbirk, Niels, Hansen, Cecilie Ida Cetti, Olsen, C. E., Kiefer, C., Hauser, T. P., Christensen, S., Jensen, Karen Rysbjerg, Ørgaard, Marian, Pattison, David, Lange, Conny Bruun Asmussen, Cipollini, D. & Koch, M. A., 2021, In: Phytochemistry. 185, 112658.

      Research output: Contribution to journal › Journal article › Research › peer-review

    39. Published

      Glucosinolate structural diversity, identification, chemical synthesis and metabolism in plants

      Blažević, I., Montaut, S., Burčul, F., Olsen, C. E., Burow, Meike, Rollin, P. & Agerbirk, Niels, 2020, In: Phytochemistry. 169, 57 p., 112100.

      Research output: Contribution to journal › Review › Research › peer-review

    40. Published

      Glucosinolate structures in evolution

      Agerbirk, Niels & Olsen, C. E., 2012, In: Phytochemistry. 77, p. 16-45 30 p.

      Research output: Contribution to journal › Review › Research › peer-review

    41. Published

      Glucosinolate turnover in Brassicales species to an oxazolidin-2-one, formed via the 2-thione and without formation of thioamide

      Agerbirk, Niels, Matthes, A., Erthmann, P. Ø., Ugolini, L., Cinti, S., Lazaridi, E., Nuzillard, J., Mueller, C., Bak, Søren, Rollin, P. & Lazzeri, L., 2018, In: Phytochemistry. 153, p. 79-93

      Research output: Contribution to journal › Journal article › Research › peer-review

    42. Published

      Glucosinolate-related glucosides in Alliaria petiolata: sources of variation in the plant and different metabolism in an adapted specialist herbivore, Pieris rapae

      Frisch, T., Agerbirk, Niels, Davis, S., Cipollini, D., Olsen, C. E., Motawie, Mohammed Saddik, Bjarnholt, Nanna & Møller, Birger Lindberg, 2014, In: Journal of Chemical Ecology. 40, 10, p. 1063-1079 17 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    43. Published

      Glucosinolates,flea beetle resistance, and leaf pubescence as taxonomic characters in the Barbarea (Brassicaceae)

      Agerbirk, Niels, Ørgaard, Marian & Nielsen, J. K., 2003, In: Phytochemistry. 63, p. 69-80 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    44. Published

      Host plant-dependent metabolism of 4-hydroxybenzylglucosinolate in Pieris rapae: substrate specificity and effects of genetic modification and plant nitrile hydratase

      Agerbirk, Niels, Olsen, C. E., Topbjerg, H. B. & Sørensen, J. C., 2007, In: Insect Biochemistry and Molecular Biology. 37, 11, p. 1119-1130 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    45. Published

      Hvorfor kålorme kan lide kål

      Agerbirk, Niels, 2004, In: Det Levende Universitet. 13, p. 6-7 2 p.

      Research output: Contribution to journal › Journal article › Communication

    46. Published

      Hydroxyl and methoxyl derivatives of benzylglucosinolate in Lepidium densiflorum with hydrolysis to isothiocyanates and non-isothiocyanate products: substitution governs product type and mass spectral fragmentation

      Pagnotta, E., Agerbirk, Niels, Olsen, C. E., Ugolini, L., Cinti, S. & Lazzeri, L., 2017, In: Journal of Agricultural and Food Chemistry. 65, 15, p. 3167-3178 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    47. Published

      Identification of Clubroot-Resistant Germplasm in a Radish (Raphanus sativus L.) Core Collection

      Ma, Y., Wang, H., Song, J., Yang, W., Jia, H., Agerbirk, Niels, Chen, Y., Li, C., Piao, Y., Li, S. & Zhang, X., 2024, In: Agronomy. 14, 1, 12 p., 157.

      Research output: Contribution to journal › Journal article › Research › peer-review

    48. Published

      Immunogenic compounds from coupling of glucosinolate degradation products to protein carriers investigated by HPCE

      Agerbirk, Niels, Frøkiær, H., Sørensen, H. & Sørensen, S., 1995. 56 p.

      Research output: Contribution to conference › Paper › Research

    49. Published

      Indole glucosinolate breakdown and its biological effects

      Agerbirk, Niels, De Vos, M., Kim, J. H. & Jander, G., 2009, In: Phytochemistry Reviews. 8, 1, p. 101-120 20 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    50. Published

      Initial and final products, nitriles, and ascorbigens produced in myrosinase-catalyzed hydrolysis of indole glucosinolates

      Agerbirk, Niels, Olsen, C. E. & Sørensen, H., 1998, In: Journal of Agricultural and Food Chemistry. 46, 4, p. 1563-1571 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

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