Mette Haubjerg Nicolaisen

Mette Haubjerg Nicolaisen

Associate Professor


  1. 2023
  2. Published

    Activity of root-knot nematodes associated with composition of a nematode-attached microbiome and the surrounding soil microbiota

    Topalovic, Olivera, Bak, Frederik, Santos, S., Sikder, M. M., Sapkota, R., Ekelund, Flemming, Nicolaisen, Mette Haubjerg & Vestergård, M., 2023, In: FEMS Microbiology Ecology. 99, 9, 11 p., fiad091.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Complete Genome Sequence of Sphingopyxis sp. Strain PET50, a Potential Polyethylene Terephthalate (PET)-Degrading Bacterium Isolated from Compost

    Lago-Maciel, A., Nielsen, Tue Kjærgaard, Jensen, K., Nicolaisen, Mette Haubjerg & Hennessy, Rosanna Catherine, 2023, In: Microbiology Resource Announcements. 12, 1, 2 p., e0097022.

    Research output: Contribution to journalJournal articleResearch

  4. Published

    Differential impacts of sewage sludge and biochar on phosphorus-related processes: An imaging study of the rhizosphere

    Bornø, Marie Louise, Zervas, A., Bak, Frederik, Merl, T., Koren, K., Nicolaisen, Mette Haubjerg, Jensen, Lars Stoumann & Müller-Stöver, Dorette Sophie, 2023, In: Science of the Total Environment. 905, 13 p., 166888.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Draft Genome Sequences of Phytase Active Endophytic and Epiphytic Erwinia gerundensis Isolated from Wheat (Triticum aestivum) Seeds

    Sølve, Jonathan, Nielsen, Tue Kjærgaard, Nicolaisen, Mette Haubjerg & Bak, Frederik, 2023, In: Microbiology Resource Announcements. 12, 1, 3 p., e0107322.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Four novel Curtobacterium phages isolated from environmental samples

    Alanin, K. W. S., Olsen, Nikoline S., Djurhuus, Amaru Miranda, Carstens, Alexander Byth, Nielsen, Tue Kjærgaard, Rothgardt, M. M., Russel, A. M., Wagner, N., Lametsch, Rene, Bak, Frederik, Hennessy, Rosanna Catherine, Nicolaisen, Mette Haubjerg, Hansen, Lars Hestbjerg & Kot, Witold, 2023, In: Archives of Virology. 168, 3

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Genetic rearrangements in Pseudomonas amygdali pathovar aesculi shape coronatine plasmids

    Nielsen, Tue Kjærgaard, Winther-Have, Caroline Sophie W, Thomsen, Iben Margrete, Jackson, R. W., Rabiey, M., Hennessy, Rosanna Catherine, Bak, Frederik, Kot, Witold, Nicolaisen, Mette Haubjerg, Carstens, Alexander Byth & Hansen, Lars Hestbjerg, 2023, In: Infection, Genetics and Evolution. 113, 10 p., 105486.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published
  9. 2022
  10. Published

    Back to our roots: exploring the role of root morphology as a mediator of beneficial plant–microbe interactions

    Herms, Courtney Horn, Hennessy, Rosanna Catherine, Bak, Frederik, Dresbøll, Dorte Bodin & Nicolaisen, Mette Haubjerg, 2022, In: Environmental Microbiology. 24, 8, p. 3264-3272

    Research output: Contribution to journalReviewResearchpeer-review

  11. Published

    Cellulose amendment promotes P solubilization by Penicillium aculeatum in non-sterilized soil

    Gómez-Muñoz, B., Efthymiou, A., Dubey, M., Sølve, Jonathan, Nicolaisen, Mette Haubjerg, Jensen, Dan Funck, Nybroe, O. & Larsen, J., 2022, In: Fungal Biology. 126, 5, p. 356-365 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Deep-rooted perennial crops differ in capacity to stabilize C inputs in deep soil layers

    Peixoto, L., Olesen, J. E., Elsgaard, L., Lønne Enggrob, K., C. Banfield, C., Dippold, M. A., Nicolaisen, Mette Haubjerg, Bak, Frederik, Zang, H., Dresbøll, Dorte Bodin, Thorup-Kristensen, Kristian & Rasmussen, J., 2022, In: Scientific Reports. 12, 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Deep-rooted plant species recruit distinct bacterial communities in subsoil than in topsoil

    Bak, Frederik, Lyhne-Kjærbye, A., Tardif, S., Dresbøll, Dorte Bodin, Nybroe, O. & Nicolaisen, Mette Haubjerg, 2022, In: Phytobiomes Journal. 6, 3, p. 236-246 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Diversity and Structure of Bacterial Communities in Different Rhizocompartments (Rhizoplane, Rhizosphere, and Bulk) at Flag Leaf Emergence in Four Winter Wheat Varieties

    Zervas, A., Ellegaard-Jensen, L., Hennessy, Rosanna Catherine, Bak, Frederik, Guan, Ying, Herms, Courtney Horn, Molina Zamudio, Kitzia Yashvelt, Thybo Ganzhorn, D., Müller-Stöver, Dorette Sophie, Ahmad, J., Grunden, A., Jacobsen, C. S. & Nicolaisen, Mette Haubjerg, 2022, In: Microbiology resource announcements. 11, 5, 3 p., e0022222.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Microbial Diversity in Four Rhizocompartments (Bulk Soil, Rhizosphere, Rhizoplane, and Endosphere) of Four Winter Wheat Varieties at the Fully Emerged Flag Leaf Growth Stage

    Ahmad, J., Zervas, A., Ellegaard-Jensen, L., Hennessy, Rosanna Catherine, Carbone, I., Cornish, V., Müller-Stöver, Dorette Sophie, Grunden, A., Jacobsen, C. S. & Nicolaisen, Mette Haubjerg, 2022, In: Microbiology Resource Announcements. 11, 11, 4 p., e0066322.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Succession of the wheat seed-associated microbiome as affected by soil fertility level and introduction of Penicillium and Bacillus inoculants in the field

    Nunes, I., Hansen, Veronika, Bak, Frederik, Bonnichsen, L., Su, J., Hao, X., Raymond, Nelly Sophie, Nicolaisen, Mette Haubjerg, Jensen, Lars Stoumann & Nybroe, O., 2022, In: FEMS Microbiology Ecology. 98, 3, 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    The cytokinin-producing plant beneficial bacterium Pseudomonas fluorescens G20-18 primes tomato (Solanum lycopersicum) for enhanced drought stress responses

    Mekureyaw, M. F., Pandey, Chandana, Hennessy, Rosanna Catherine, Nicolaisen, Mette Haubjerg, Liu, Fulai, Nybroe, O. & Roitsch, Thomas Georg, 2022, In: Journal of Plant Physiology. 270, 15 p., 153629.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. 2021
  19. Published

    A novel microcosm to identify inherently competitive microorganisms with the ability to mineralize phytate in solum

    Pittroff, S. M., Olsson, S., Doolette, A., Greiner, R., Richardson, A. E. & Nicolaisen, Mette Haubjerg, 2021, In: Soil Ecology Letters. 3, p. 367-382

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    Complete Genome Sequence of Paenibacillus sp. Strain 37, a Plant Growth-Promoting Bacterium Isolated from the Rhizosphere of Abies nordmanniana (Nordmann Fir)

    Garcia-Lemos, A. M., Hennessy, Rosanna Catherine, Nielsen, Tue Kjærgaard, Hansen, Lars Hestbjerg & Nicolaisen, Mette Haubjerg, 2021, In: Microbiology Resource Announcements. 10, 8, 2 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Complete Genome Sequence of a Novel Dyadobacter sp. Strain, NIV53, Isolated from 2-Meter Deep Subsurface Sediment

    Bak, Frederik, Henriksen, Alexander Pil, Nielsen, Tue Kjærgaard & Nicolaisen, Mette Haubjerg, 2021, In: Microbiology resource announcements. 10, 44, 2 p., e0075421.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Complete Genome Sequence of the Cytokinin-Producing Biocontrol Strain Pseudomonas fluorescens G20-18

    Nielsen, Tue Kjærgaard, Mekureyaw, M. F., Hansen, Lars Hestbjerg, Nicolaisen, Mette Haubjerg, Roitsch, Thomas Georg & Hennessy, Rosanna Catherine, 2021, In: Microbiology Resource Announcements. 10, 30, 2 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Root distribution in intercropping systems–a comparison of DNA based methods and visual distinction of roots

    Hassan, A., Dresbøll, Dorte Bodin, Rasmussen, Camilla Ruø, Lyhne-Kjærbye, A., Nicolaisen, Mette Haubjerg, Stokholm, M. S., Lund, O. S. & Thorup-Kristensen, Kristian, 2021, In: Archives of Agronomy and Soil Science. 67, 1, p. 15-28

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. 2020
  25. Published

    Different Effects of Soil Fertilization on Bacterial Community Composition in the Penicillium canescens Hyphosphere and in Bulk Soil

    Zhang, Y., Hao, X., Garcia-Lemos, A. M., Nunes, I., Nicolaisen, Mette Haubjerg & Nybroe, O., 2020, In: Applied and Environmental Microbiology. 86, 10, 16 p., ARTN e02969-19.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Digging Deeper for Agricultural Resources, the Value of Deep Rooting

    Thorup-Kristensen, Kristian, Halberg, N., Nicolaisen, Mette Haubjerg, Olesen, J. E., Crews, T. E., Hinsinger, P., Kirkegaard, J., Pierret, A. & Dresbøll, Dorte Bodin, 2020, In: Trends in Plant Science. 25, 4, p. 406-417

    Research output: Contribution to journalReviewResearchpeer-review

  27. Published

    Effects of Intra- and Interspecific Plant Density on Rhizosphere Bacterial Communities

    Cavalieri, Andrea, Bak, Frederik, Garcia-Lemos, A. M., Weiner, Jacob, Nicolaisen, Mette Haubjerg & Nybroe, O., 2020, In: Frontiers in Microbiology. 11, 14 p., 1045.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Published

    Exposing Deep Roots: A Rhizobox Laboratory

    Thorup-Kristensen, Kristian, Halberg, N., Nicolaisen, Mette Haubjerg, Olesen, J. E. & Dresbøll, Dorte Bodin, 2020, In: Trends in Plant Science. 25, 4, p. 418-419

    Research output: Contribution to journalJournal articleResearch

  29. Published

    Identification of Root-Associated Bacteria That Influence Plant Physiology, Increase Seed Germination, or Promote Growth of the Christmas Tree Species Abies nordmanniana

    Garcia-Lemos, A. M., Grosskinsky, D. K., Akhtar, S. S., Nicolaisen, Mette Haubjerg, Roitsch, Thomas Georg, Nybroe, O. & Veierskov, Bjarke, 2020, In: Frontiers in Microbiology. 11, 15 p., 566613.

    Research output: Contribution to journalJournal articleResearchpeer-review

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