Section for Plant and Soil Sciences

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  1. Published

    Transitioning towards commercial upland agriculture: A comparative study in Northern Lao PDR

    Hepp, C. M., Bruun, Thilde Bech & de Neergaard, Andreas, Apr 2019, In: NJAS - Wageningen Journal of Life Sciences. 88, p. 57-65

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Short-term fallow in extensive upland shifting cultivation systems of Northern Lao PDR: Its role in soil fertility restoration

    Hepp, C. M., de Neergaard, Andreas & Bruun, Thilde Bech, 2018, In: Land Degradation & Development. 29, 9, p. 2911-2919 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    FROM LAND TO RICHES: THE SHIFTING ROLE OF LAND AS UPLAND LIVELIHOODS COMMERCIALIZE IN LAO P.D.R.

    Hepp, C. M., 2017, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  4. Published

    Bricks out of the wall: polysaccharide extramural functions

    Herburger, K., Głazowska, S. & Mravec, Jozef, 2022, In: Trends in Plant Science. 27, 12, p. 1231-1241 11 p.

    Research output: Contribution to journal › Review › Research › peer-review

  5. Published

    Miljø

    Hermansen, J. E., Munkholm, L., Bruus, M., Eriksen, J., Poulsen, H. D., Kronvang, B., Bak, J. L., Dalgaard, T., Kristensen, H. L., Rasmussen, A., Adamsen, A. P., Hansen, B., Brüsch, W., Thorling, L., Magid, Jakob, Rasmussen, S. K. & Jensen, Lars Stoumann, 2015, Økologiens bidrag til samfundsgoder: Vidensyntese 2015. Jespersen, L. M. (ed.). ICROFS, p. 107-167 61 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  6. Published

    Green biomass - protein production through bio-refining

    Hermansen, J. E., Jørgensen, U., Lærke, P. E., Manevski, K., Boelt, B., Jensen, S. K., Weisbjerg, M. R., Dalsgaard, T. K., Danielsen, M., Asp, T., Ambye-Jensen, M., Sørensen, C. A. G., Jensen, M. V., Gylling, M., Lindedam, J., Lübeck, M. & Fog, E., 2017, DCA - Danish Centre for Food and Agriculture. 72 p. (DCA report; No. 093).

    Research output: Book/Report › Report › Commissioned

  7. Published

    Potential for optimized production and use of rapeseed biodiesel. Based on a comprehensive real-time LCA case study in Denmark with multiple pathways

    Herrmann, I. T., Jørgensen, A., Bruun, Sander & Hauschild, M. Z., 2013, In: International Journal of Life Cycle Assessment. 18, 2, p. 418-430 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Genomic prediction unifies animal and plant breeding programs to form platforms for biological discovery

    Hickey, J. M., Chiurugwi, T., Mackay, I., Powell, W., Eggen, A., Kilian, A., Jones, C., Canales, C., Grattapaglia, D., Bassi, F., Atlin, G., Gorjanc, G., Dawson, I., Rabbi, I., Ribaut, J-M., Rutkoski, J., Benzi, J., Lightner, J., Mwacharo, J., Parmentier, J. & 15 others, Robbins, K., Skot, L., Wolfe, M., Rouard, M., Clark, M., Amer, P., Gardiner, P., Hendre, P., Mrode, R., Sivasankar, S., Rasmussen, S. K., Groh, S., Jackson, V., Thomas, W. & Beyene, Y., 2017, In: Nature Genetics. 49, 9, p. 1297-1303 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    High fire frequency reduces soil fertility underneath woody plant canopies of Mediterranean ecosystems

    Hinojosa, M. B., Albert-Belda, E., Gómez-Munoz, B. & Moreno, J. M., 2021, In: Science of the Total Environment. 752, 14 p., 141877.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    High levels of genetic and genotypic diversity in field populations of the barley pathogen Ramularia collo-cygni

    Hjortshøj, R. L., Ravnshøj, A. R., Nyman, M., Orabi, J., Backes, G. M., Pinnschmidt, H., Havis, N., Stougaard, J. & Stukenbrock, E. H., 2013, In: European Journal of Plant Pathology. 136, 1, p. 51-60 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Gene Replacement in Arabidopsis Reveals Manganese Transport as an Ancient Feature of Human, Plant and Cyanobacterial UPF0016 Proteins

    Hoecker, N., Hennecke, Y., Schrott, S., Marino, G., Schmidt, Sidsel Birkelund, Leister, D. & Schneider, A., 2021, In: Frontiers in Plant Science. 12, 15 p., 697848.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Three differentially expressed basic peroxidases from wound-lignifying Asparagus officinalis

    Holm, Kirsten, Andreasen, P. H., Eckloff, R. M. G., Kristensen, B. K. & Rasmussen, S. K., 1 Oct 2003, In: Journal of Experimental Botany. 54, 391, p. 2275-2284 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Heterologous microProtein expression identifies LITTLE NINJA, a dominant regulator of jasmonic acid signaling

    Hong, S., Sun, B., Straub, D., Blaakmeer, A., Mineri, L., Koch, J., Brinch-Pedersen, H., Holme, I. B., Burow, Meike, Jørgensen, Hans Jørgen Lyngs, Mar Alba, M. & Wenkel, Stephan, 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 42, p. 26197-26205 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Organization and transcription of B1 hordein genes in high lysine mutants of barley

    Hopp, H. E., Rasmussen, S. K. & Brandt, A., 1 May 1983, In: Carlsberg Research Communications. 48, 3, p. 201-216 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Stakeholder perceptions of manure treatment technologies in Denmark, Italy, the Netherlands and Spain

    Hou, Y., Velthof, G. L., Case, S., Oelofse, M., Grignani, C., Balsari, P., Zavattaro, L., Gioelli, F., Bernal, M. P., Fangueiro, D., Trindade, H., Jensen, Lars Stoumann & Oenema, O., 20 Jan 2018, In: Journal of Cleaner Production. 172, p. 1620-1630 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Prediction of biochemical methane potential of urban organic waste using Fourier transform mid-infrared photoacoustic spectroscopy and multivariate analysis

    Huang, J., Bekiaris, G., Fitamo, T., Scheutz, C. & Bruun, Sander, 2021, In: Science of the Total Environment. 790, 147959.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Characterization of digestate composting stability using fluorescence EEM spectroscopy combining with PARAFAC

    Huang, J., Han, L. & Huang, G., 1 May 2019, In: Waste Management and Research. 37, 5, p. 486-494

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Application of Fourier transform mid-infrared photoacoustic spectroscopy for rapid assessment of phosphorus availability in digestates and digestate-amended soils

    Huang, J., Glæsner, N., Triolo, J. M., Bekiaris, G., Bruun, Sander & Liu, F., 2022, In: Science of the Total Environment. 832, 155040.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Identifying the fingerprint of permanganate oxidizable carbon as a measure of labile soil organic carbon using Fourier transform mid-infrared photoacoustic spectroscopy

    Huang, J., Rinnan, Åsmund, Bruun, Thilde Bech, Engedal, Tine & Bruun, Sander, 2021, In: European Journal of Soil Science. 72, 4, p. 1831-1841

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Characterisation of soil and organic wastes using Fourier transform infrared photoacoustic spectroscopy (FTIR-PAS) and multivariate analysis

    Huang, J., 2021, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 123 p.

    Research output: Book/Report › Ph.D. thesis › Research

  21. Published

    Effective strategies to diagnose and correct manganese deficiency in cereals

    Husted, Søren, Schmidt, Sidsel Birkelund, Pedas, P. R., Jensen, Poul Erik, Laursen, Kristian Holst & Schjoerring, Jan K., 2017, Proceedings Book: XVIII International Plant Nutrition Colloquium with Boron and Manganese Satellite Meetings. Carstensen, A., Laursen, K. H. & Schjoerring, J. K. (eds.). University of Copenhagen, p. 939-940 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  22. Published

    Bioimaging and molecular speciation analysis of essential plant nutrients

    Husted, Søren, Schmidt, Sidsel Birkelund, Hansen, Thomas Hesselhøj, Chen, A. & Persson, Daniel Pergament, 2017, Proceedings Book: XVIII International Plant Nutrition Colloquium with Boron and Manganese Satellite Meetings. Carstensen, A., Laursen, K. H. & Schjoerring, J. K. (eds.). University of Copenhagen, p. 105-106 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  23. Published

    What is missing to advance foliar fertilization using nanotechnology?

    Husted, Søren, Minutello, Francesco, Pinna, Andrea, Tougaard, Stine Le, Møs, Kicki Pauline & Kopittke, P. M., 2023, In: Trends in Plant Science. 28, 1, p. 90-105 16 p.

    Research output: Contribution to journal › Review › Research › peer-review

  24. Published

    Modelling the potential of slurry management technologies to reduce the constraints of environmental legislation on pig production

    Hutchings, N. J., ten Hoeve, Marieke, Jensen, R., Bruun, Sander & Fjerbæk Søtoft, L., 2013, In: Journal of Environmental Management. 130, p. 447-456 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Emerging Methods for Biological Control of Barley Diseases Including the Role of Endophytes

    Høyer, A. K., Jørgensen, Hans Jørgen Lyngs, Jensen, Birgit, Murphy, B. R. & Hodkinson, T. R., 2019, Endophytes for a Growing World. Hodkinson, T. R., Doohan, F. M., Saunders, M. J. & Murphy, B. R. (eds.). Cambridge University Press, p. 93-119 27 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  26. Published

    Fungal Endophytes Isolated from Elymus repens, a Wild Relative of Barley, Have Potential for Biological Control of Fusarium culmorum and Pyrenophora teres in Barley

    Høyer, A. K., Jørgensen, Hans Jørgen Lyngs, Hodkinson, T. R. & Jensen, Birgit, 2022, In: Pathogens. 11, 14 p., 1097.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Endophytic colonisation of tomato plants by the biological control agent Clonostachys rosea

    Høyer, A. K., Jørgensen, Hans Jørgen Lyngs, Amby, Daniel Buchvaldt & Jensen, Birgit, 2016, Biological and integrated control of plant pathogens. International Organisation for Biological and Integrated Control (IOBC), p. 101-106 6 p. (IOBC-WPRS Bulletin, Vol. 115).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  28. Published

    Gasification biochar has limited effects on functional and structural diversity of soil microbial communities in a temperate agroecosystem

    Imparato, V., Hansen, Veronika, Santos, S., Nielsen, Tue Kjærgaard, Giagnoni, L., Hauggaard-Nielsen, H., Johansen, A., Renella, G. & Winding, A., 2016, In: Soil Biology & Biochemistry. 99, p. 128-136 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Dissolution kinetics of pyroaurite-type layered double hydroxide doped with Zn: perspectives for pH controlled micronutrient release

    Imran, A., López Rayo, S., Magid, Jakob & Hansen, Hans Chr. Bruun, 2016, In: Applied Clay Science. 123, p. 56-63 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Partial Root Zone Drying Irrigation Improves Water Use Efficiency but Compromise the Yield and Quality of Cotton Crop

    Iqbal, R., Raza, M. A. S., Rashid, Muhammad Adil, Toleikiene, M., Ayaz, M., Mustafa, F., Ahmed, M. Z., Hyder, S., Rahman, M. H., Ahmad, S., Aslam, M. U. & Haider, I., 2021, In: Communications in Soil Science and Plant Analysis. 52, 13, p. 1558-1573 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Quantifying the impacts of climate change on wheat phenology, yield, and evapotranspiration under irrigated and rainfed conditions

    Ishaque, W., Osman, R., Hafiza, B. S., Malghani, Saadatullah, Zhao, B., Xu, M. & Ata-Ul-Karim, S. T., 2023, In: Agricultural Water Management. 275, 11 p., 108017.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Overexpression of the AtSHI gene in poinsettia, Euphorbia pulcherrima, results in compact plants

    Islam, M. A., Lütken, Henrik Vlk, Haugslien, S., Blystad, D., Torre, S., Rolcik, J., Rasmussen, S. K., Olsen, J. E. & Clarke, J. L., 2013, In: P L o S One. 8, 1, 10 p., e53377.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    The effective mitigation of greenhouse gas emissions from rice paddies without compromising yield by early-season drainage

    Islam, S. F., van Groenigen, J. W., Jensen, Lars Stoumann, Sander, B. O. & de Neergaard, Andreas, 15 Jan 2018, In: Science of the Total Environment. 612, p. 1329-1339 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Reducing greenhouse gas emissions from rice production systems - towards adaptation of more water-efficient and Climate Smart Agricultural practices

    Islam, S. F., 2021, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 206 p.

    Research output: Book/Report › Ph.D. thesis › Research

  35. Published

    Reducing greenhouse gas emissions and grain arsenic and lead levels without compromising yield in organically produced rice

    Islam, S. F., de Neergaard, Andreas, Sander, B. O., Jensen, Lars Stoumann, Wassmann, R. & Van Groenigen, J. W., 2020, In: Agriculture, Ecosystems & Environment. 295, 16 p., 106922.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Mitigation of greenhouse gas emissions and reduced irrigation water use in rice production through water-saving irrigation scheduling, reduced tillage and fertiliser application strategies

    Islam, S. F., Sander, B. O., Quilty, J. R., de Neergaard, Andreas, Van Groenigen, J. W. & Jensen, Lars Stoumann, 2020, In: Science of the Total Environment. 739, 15 p., 140215.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Urban allotment gardens for the biomonitoring of atmospheric trace element pollution

    Izquierdo-Díaz, M., Holm, Peter Engelund, Barrio-Parra, F., De Miguel, E., Lekfeldt, J. D. S. & Magid, Jakob, 1 Mar 2019, In: Journal of Environmental Quality. 48, 2, p. 518-525

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Assessment of lettuces grown in urban areas for human consumption and as bioindicators of atmospheric pollution

    Izquierdo-Díaz, M., Hansen, Veronika, Barrio-Parra, F., De Miguel, E., You, Y. & Magid, Jakob, 2023, In: Ecotoxicology and Environmental Safety. 256, 10 p., 114883.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    The use of AFLP markers to elucidate relationships within Cryptocoryne (Araceae)

    Jacobsen, Niels, Bastmeijer, J., Christensen, C., Idei, T., Lange, Conny Bruun Asmussen, Orabi, J., Sookchaloem, D., Toneatto, F. & Ørgaard, Marian, 2015, In: Aroideana. 38E, 1, p. 186-193 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Hormetic responses in arbuscular mycorrhizal fungi

    Jakobsen, Iver, Murmann, L. M. & Rosendahl, Søren, 2021, In: Soil Biology & Biochemistry. 159, 6 p., 108299.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Plant growth responses to elevated atmospheric CO2 are increased by phosphorus sufficiency but not by arbuscular mycorrhizas

    Jakobsen, Iver, Smith, S. E., Smith, F. A., Watts-Williams, S. J., Clausen, S. S. & Grønlund, M., 2016, In: Journal of Experimental Botany. 67, 21, p. 6173-6186 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Nutrient dynamics in arbuscular mycorrhizal networks

    Jakobsen, Iver & Hammer, E. C., 2015, Mycorrhizal Networks. Horton, R. T. (ed.). Springer Netherlands, p. 91-131 41 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  43. Published

    Clonostachys rosea reduces spot blotch in barley by inhibiting pre-penetration growth and sporulation of Bipolaris sorokiniana without inducing resistance

    Jensen, Birgit, Lübeck, P. S. & Jørgensen, Hans Jørgen Lyngs, 2016, In: Pest Management Science. 72, 12, p. 2231-2239 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Relationship between fungal endophytes and plant disease: C9.3-3

    Jensen, Birgit, Collinge, David B. & Jørgensen, Hans Jørgen Lyngs, 2023, p. 280. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  45. Published

    Differential influence of Bacillus subtilis strains on Arabidopsis root architecture through common and distinct plant hormonal pathways

    Jensen, Camilla Niketa Gadomska, Pang, J. K. Y., Hahn, C. M., Gottardi, M., Husted, Søren, Moelbak, L., Kovács, Á. T., Fimognari, L. & Schulz, Alexander, 2024, In: Plant Science. 339, 12 p., 111936.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Relating soil C and organic matter fractions to soil structural stability

    Jensen, J. L., Schjønning, P., Watts, C. W., Christensen, B. T., Peltre, C. & Munkholm, L. J., 1 Mar 2019, In: Geoderma. 337, p. 834-843 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Økonomiske vurderinger i forhold til værdikæden for Gul Bioraffinering

    Jensen, Jørgen Dejgård, Gylling, M. & Jørgensen, H., 2018, Institut for Fødevare- og Ressourceøkonomi, Københavns Universitet. 11 p. (IFRO Dokumentation; No. 2018/6).

    Research output: Book/Report › Report › Research

  48. Published

    Animal manure fertiliser value, crop utilisation and soil quality impacts

    Jensen, Lars Stoumann, 2013, Animal manure recycling: treatment and management. Sommer, S. G., Christensen, M. L., Schmidt, T. & Jensen, L. S. (eds.). Wiley, p. 295-328 34 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  49. Published

    Animal manure residue upgrading and nutrient recovery in biofertilisers

    Jensen, Lars Stoumann, 2013, Animal manure recycling: treatment and management. Sommer, S. G., Christensen, M. L., Schmidt, T. & Jensen, L. S. (eds.). Wiley, p. 271-294

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  50. Published

    Manure organic matter – characteristics and microbial transformations

    Jensen, Lars Stoumann & Sommer, S. G., 2013, Animal manure recycling: treatment and management. Sommer, S. G., Christensen, M. L., Schmidt, T. & Jensen, L. S. (eds.). Wiley, p. 67-90

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

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