Section for Plant and Soil Sciences

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  1. Published

    Searching for novel fungal biological control agents for plant disease control among endophytes

    Collinge, David B., Jørgensen, Hans Jørgen Lyngs, Latz, Meike, Manzotti, A., Ntana, F., Rojas Tayo, E. C. & Jensen, Birgit, 2019, Endophytes for a growing world. Hodkinson, T., Doohan, F., Saunders, M. & Murphy, B. (eds.). Cambridge University Press, p. 25-51 17 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  2. Published

    From BCA discovery in cereals to biological control of Fusarium head blight

    Collinge, David B., Khairoullina, A., Jørgensen, Hans Jørgen Lyngs & Jensen, Birgit, 2023, p. 58-59. 1 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  3. Published

    The status and prospects for biotechnological approaches for attaining sustainable disease resistance

    Collinge, David B., Mullins, E., Jensen, Birgit & Jørgensen, Hans Jørgen Lyngs, 2016, Plant pathogen resistance biotechnology. Collinge, D. B. (ed.). Wiley-Blackwell, p. 1-20 20 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  4. Published

    Phosphorus availability on many organically managed farms in Europe

    Cooper, J., Reed, E. Y., Hortenhuber, S., Lindenthal, T., Loes, A., Mader, P., Magid, Jakob, Oberson, A., Kolbe, H. & Moeller, K., 2018, In: Nutrient Cycling in Agroecosystems. 110, 2, p. 227-239

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Contrasting effects of nicotianamine synthase knockdown on zinc and nickel tolerance and accumulation in the zinc/cadmium hyperaccumulator Arabidopsis halleri

    Cornu, J., Deinlein, U., Hoereth, S., Braun, M., Schmidt, H., Weber, M., Persson, Daniel Pergament, Husted, Søren, Schjoerring, Jan K. & Clemens, S., 2015, In: New Phytologist. 206, 2, p. 738-750 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Choosing co-substrates to supplement biogas production from animal slurry - a life cycle assessment of the environmental consequences

    Croxatto Vega, G. C., ten Hoeve, Marieke, Birkved, M., Sommer, S. G. & Bruun, Sander, 2014, In: Bioresource Technology. 171, p. 410-420 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    The root external mycelium of mycorrhizal fungi has a key role in plant nutrition but is suppressed by the soil microbiota

    Cruz Paredes, C., Watts-Williams, S. J., Battini, F., Joner, E. J., Svenningsen, N. B., Dela Cruz, Majbrit, Christensen, Jan H., Nybroe, O. & Jakobsen, Iver, 2017, Proceedings Book: XVIII International Plant Nutrition Colloquium with Boron and Manganese Satellite Meetings. Carstensen, A., Laursen, K. H. & Schjoerring, J. K. (eds.). University of Copenhagen, p. 116-117 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  8. Published

    Suppression of arbuscular mycorrhizal fungal activity in a diverse collection of non-cultivated soils

    Cruz Paredes, C., Svenningsen, N. B., Nybroe, O., Kjøller, Rasmus, Frøslev, Tobias Guldberg & Jakobsen, Iver, Mar 2019, In: FEMS Microbiology Ecology. 95, 3, p. 1-10 fiz020.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Isotope Labeling to Study Phosphorus Uptake in the Arbuscular Mycorrhizal Symbiosis

    Cruz-Paredes, C. & Gavito, M. E., 2020, Arbuscular mycorrhizal fungi: Methods and protocols. N. F. & L. L. (eds.). Humana Press, p. 213-222 10 p. (Methods in Molecular Biology, Vol. 2146).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  10. Published

    Disentangling the abiotic and biotic components of AMF suppressive soils

    Cruz-Paredes, C., Diera, T., Davey, M., Rieckmann, Maria Monrad, Christensen, P., Dela Cruz, Majbrit, Laursen, Kristian Holst, Joner, E. J., Christensen, Jan H., Nybroe, O. & Jakobsen, Iver, 2021, In: Soil Biology and Biochemistry. 159, 11 p., 108305.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Different sensitivity of a panel of Rhizophagus isolates to AMF-suppressive soils

    Cruz-Paredes, C., Jakobsen, Iver & Nybroe, O., 2020, In: Applied Soil Ecology. 155, 5 p., 103662.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Factors affecting process temperature and biogas production in small-scale rural biogas digesters in winter in northern Vietnam

    Cuong, P. H., Vu, C. C., Sommer, S. G. & Bruun, Sander, 2014, In: Asian-Australasian Journal of Animal Sciences. 27, 7, p. 1050-1056 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Brief oxygenation events in locally anoxic oceans during the Cambrian solves the animal breathing paradox

    Dahl, Tais Wittchen, Siggaard-Andersen, Marie-Louise, Schovsbo, E. H., Persson, Daniel Pergament, Husted, Søren, Hougård, Iben Winther, Dickson, A. J., Kjær, Kurt H. & Nielsen, Arne Thorshøj, 2019, In: Scientific Reports. 9, 9 p., 11669.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    High-throughput method for amino acid analysis of green biomass by single quadrupole MS detection

    Dahl-Lassen, R., van Hecke, J. J. J., Jørgensen, H. & Schjoerring, Jan K., 2017, Proceedings Book: XVIII International Plant Nutrition Colloquium with Boron and Manganese Satellite Meetings. Carstensen, A., Laursen, K. H. & Schjoerring, J. K. (eds.). University of Copenhagen, p. 833-834 2 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  15. Published

    High-throughput analysis of amino acids in plant materials by single quadrupole mass spectrometry

    Dahl-Lassen, R., van Hecke, J. J. J., Jørgensen, H., Bukh, C., Andersen, B. & Schjoerring, Jan K., 2018, In: Plant Methods. 14, 9 p., 8.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Policies for agricultural nitrogen management-trends, challenges and prospects for improved efficiency in Denmark

    Dalgaard, T., Hansen, B., Hasler, B., Hertel, O., Hutchings, N. J., Jacobsen, Brian H., Jensen, Lars Stoumann, Kronvang, B., Olesen, J. E., Schjoerring, Jan K., Kristensen, I. S., Graversgaard, M., Termansen, M. & Vejre, Henrik, 2014, In: Environmental Research Letters. 9, 11, 115002.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    DNMARK: Danish Nitrogen Mitigation Assessment: Research and Know-how for a Sustainable, Low-Nitrogen Food Production

    Dalgaard, T., Brock, S., Hansen, B., Hasler, B., Hertel, O., Hutchings, N. J., Jacobsen, Brian H., Jensen, Lars Stoumann, Kjeldsen, C., Kronvang, B., Olesen, J. E., Schjoerring, Jan K., Sigsgaard, T., Graversgaard, M., Hashemi, F., Turner, K., Vejre, Henrik, de Vries, W. & Wiborg, I. A., 2020, Just Enough Nitrogen: Perspectives on how to get there for regions with too much and too little nitrogen. Sutton, M. A., Mason, K. E., Bleeker, A., Hicks, W. K., Masso, C., Raghuram, N., Reis, S. & Bekunda, M. (eds.). Springer, p. 363-376 14 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  18. Published

    Solution scenarios and the effect of top down versus bottom up N mitigation measures: Experiences from the Danish Nitrogen Assessment

    Dalgaard, T., Brock, S., Børgesen, C. D., Graversgaard, M., Hansen, B., Hasler, B., Hertel, O., Hutchings, N. J., Jacobsen, B., Jensen, Lars Stoumann, Kjeldsen, C., Olesen, J. E., Schjoerring, Jan K., Sigsgaard, T., Andersen, Peter Stubkjær, Termansen, Mette, Vejre, Henrik, Odgaard, M. V., de Vries, W. & Wiborg, I., 2016. 4 p.

    Research output: Contribution to conference › Conference abstract for conference › Research

  19. Published

    Suppression of XopQ–XopX-induced immune responses of rice by the type III effector XopG

    Deb, S., Gokulan, C. G., Nathawat, R., Patel, H. K. & Sonti, R. V., 2022, In: Molecular Plant Pathology. 23, 5, p. 634-648

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    TILLING in plant disease control: applications and perspectives

    Desiderio, F., Torp, A. M., Vale, G. & Rasmussen, S. K., 2016, Plant pathogen resistance biotechnology. Collinge, D. B. (ed.). Wiley-Blackwell, p. 365-384 20 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  21. Published

    Genetic diversity and structure found in samples of Eritrean bread wheat

    Desta, Z. A., Orabi, J., Jahoor, A. & Backes, G., 2014, In: Plant Genetic Resources. 12, 1, p. 151-155 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Temporal and Spatial Patterns of Zinc and Iron Accumulation during Barley (Hordeum vulgare L.) Grain Development

    Detterbeck, A., Pongrac, P., Persson, Daniel Pergament, Vogel-Mikus, K., Kelemen, M., Vavpetic, P., Pelicon, P., Arcon, I., Husted, Søren, Schjoerring, Jan K. & Clemens, S., 2020, In: Journal of Agricultural and Food Chemistry. 68, 44, p. 12229-12240 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    The search for candidate genes associated with natural variation of grain Zn accumulation in barley

    Detterbeck, A., Nagel, M., Rensch, S., Weber, M., Börner, A., Persson, Daniel Pergament, Schjoerring, Jan K., Christov, V. & Clemens, S., 2 Jul 2019, In: Biochemical Journal. 476, 13, p. 1889-1909

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Leaf morphology and stable isotope ratios of carbon and nitrogen in Acacia senegal (L.) Wild trees vary with climate at the geographic origin and ploidy level

    Diatta, O., Kjær, Erik Dahl, Diallo, A. M., Nielsen, Lene Rostgaard, Novak, V., Sanogo, D., Laursen, Kristian Holst, Hansen, Jon Kehlet & Ræbild, Anders, 2022, In: Trees. 36, p. 295-312 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Physiochemical properties of rice with contrasting resistant starch content

    Ding, Y., Huang, J., Zhang, N., Rasmussen, S. K., Wu, D. & Shu, X., Sep 2019, In: Journal of Cereal Science. 89, p. 1-7 102815.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Surface properties correlate to the digestibility of hydrothermally pretreated lignocellulosic Poaceae biomass feedstocks

    Djajadi, Demi Tristan, Hansen, A. R., Jensen, A., Thygesen, Lisbeth Garbrecht, Pinelo, M., Meyer, A. S. & Jørgensen, H., 2017, In: Biotechnology for Biofuels. 10, 49, 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Lignosulfonate properties and reaction conditions enhance precipitation and affect ensuing quality of proteins from green biomass juice for monogastric animal feed

    Djajadi, Demi Tristan, Beatriz Brenelli de Paiva, L., Franco, T. T., Thygesen, Lisbeth Garbrecht & Jørgensen, H., 2022, In: Animal Feed Science and Technology. 285, 12 p., 115212.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Foliar application of zinc sulphate and zinc EDTA to wheat leaves: differences in mobility, distribution, and speciation

    Doolette, C. L., Read, T., Li, C., Scheckel, K. G., Donner, E., Kopittke, P. M., Schjoerring, Jan K. & Lombi, E., 2018, In: Journal of Experimental Botany. 69, 18, p. 4469-4481 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Genome-wide re-sequencing reveals the adaptive potential of European ash (Fraxinus excelsior)

    Doonan, J., Budde, K. B., Lobo, A., Kosawang, C., Verbylaite, R., Pliura, A., Ulaszewski, B., Thomas, K., Konrad, H., Jørgensen, H. J. L., Seegmüller, S., Liziniewicz, M., Cleary, M., Nemesio-Gorriz, M., Fussi, B., Kirisits, T., Gilbert, M. T. P., Martin, M., Heuertz, M., Kjær, E. D. & 1 others, Nielsen, L. R., 2022, 7th IUFRO International Workshop on the Genetics of Tree-Parasite Interactions in Forestry: Book of abstracts: GTPI 2022. IUFRO, p. 49 1 p.

    Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

  30. Published

    Transcriptome profiling of Fraxinus excelsior genotypes infested by emerald ash borer

    Doonan, James, Kosawang, Chatchai, Eisenring, M., Ladd, T., Roe, A. D., Budde, K. B., Jørgensen, Hans Jørgen Lyngs, Queloz, V., Nielsen, Lene Rostgaard & Gossner, M. M., 2023, In: Scientific data. 10, 680, 7 p., 680.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Unconventional extracellular vesicle secretion in plant immunity against filamentous pathogens

    Doukoudaki, Paraskevi, 2023, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 129 p.

    Research output: Book/Report › Ph.D. thesis › Research

  32. Published

    Osmotic Stress Alleviation in Saccharomyces cerevisiae for High Ethanol Fermentations with Different Wort Substrates

    Douradinho, R., Sica, Pietro, Tonoli, F., Mattos, E., Oliveira, M., Pinto, A., Mota, L., Faria, T., Costa, V. F., Leite, G., Arthur, V., Coelho, S. & Baptista, A., 2023, In: Stresses. 3, 4, p. 813-826

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Chloroplast magnesium transporters play essential but differential roles in maintaining magnesium homeostasis

    Dukic, E., van Maldegem, K. A., Shaikh, K. M., Fukuda, K., Töpel, M., Solymosi, K., Hellsten, J., Hansen, Thomas Hesselhøj, Husted, Søren, Higgins, J., Sano, S., Ishijima, S. & Spetea, C., 2023, In: Frontiers in Plant Science. 14, 17 p., 1221436.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    K+ and Cl− channels/transporters independently fine-tune photosynthesis in plants

    Dukic, E., Herdean, A., Cheregi, O., Sharma, A., Nziengui, H., Dmitruk, D., Solymosi, K., Pribil, Mathias & Spetea, C., 2019, In: Scientific Reports. 9, p. 1-12 8639.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Greenhouse gas emissions from passive composting of manure and digestate with crop residues and biochar on small-scale livestock farms in Vietnam

    Duong, Q. V., de Neergaard, Andreas, Toan Duc Tran, Huong Thi Thu Hoang, Van Thi Khanh Vu & Jensen, Lars Stoumann, 2015, In: Environmental Technology. 36, 23, p. 2924-2935 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Greenhouse Gas Emissions from Manure Management Chains on Smallholder Livestock Farms with and without Biogas

    Duong, Q. V., 2014, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 213 p.

    Research output: Book/Report › Ph.D. thesis › Research

  37. Published

    Response of bacterial communities to the application of sewage sludge biochar and Penicillium aculeatum in rhizosphere and bulk soil of wheat

    Efthymiou, A., Nunes, I., Jensen, Birgit & Jakobsen, Iver, 2023, In: Applied Soil Ecology. 190, 10 p., 104986.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Augmentation of the phosphorus fertilizer value of biochar by inoculation of wheat with selected Penicillium strains

    Efthymiou, A., Grønlund, M., Müller-Stöver, Dorette Sophie & Jakobsen, Iver, 2018, In: Soil Biology and Biochemistry. 116, p. 139-147 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    The roles of mycorrhiza and Penicillium inoculants in phosphorus uptake by biochar-amended wheat

    Efthymiou, A., Jensen, Birgit & Jakobsen, Iver, 2018, In: Soil Biology & Biochemistry. 127, p. 168-177

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Combined application of biochar and phosphate-solubilizing Penicillium spp. in wheat: effects on plant and soil microorganisms

    Efthymiou, K., 2018, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  41. Published

    Exploring the Role of Zinc in Maize (Zea Mays L.) through Soil and Foliar Application

    Ehsanullah, Tariq, Azeem, Randhawa, M. A., Anjum, S. A., Nadeem, M. & Naeem, M., 2015, In: Universal Journal of Agricultural Research. 3, 3, p. 69-75

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    The plastid envelope chloroplast manganese transporter1 is essential for manganese homeostasis in Arabidopsis

    Eisenhut, M., Hoecker, N., Schmidt, Sidsel Birkelund, Basgaran, R. M., Flachbart, S., Jahns, P., Eser, T., Geimer, S., Husted, Søren, Webers, A. P. M., Leister, D. & Schneider, A., 2018, In: Molecular Plant. 11, 7, p. 955-969 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Optimization of storage conditions for adequate shelf-life of 'Pesta' formulation of Fusarium oxysporum 'Foxy 2', a potential mycoherbicide for Striga: Effects of temperature, granule size and water activity

    Elzein, A., Kroschel, J. & Müller-Stöver, Dorette Sophie, Sep 2004, In: Biocontrol Science and Technology. 14, 6, p. 545-559

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Effects of inoculum type and propagule concentration on shelf life of Pesta formulations containing Fusarium oxysporum Foxy 2, a potential mycoherbicide agent for Striga spp.

    Elzein, A., Kroschel, J. & Müller-Stöver, Dorette Sophie, Jun 2004, In: Biological Control. 30, 2, p. 203-211

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Soil organic carbon input and stabilization from cover crops

    Engedal, Tine, 2024, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 143 p.

    Research output: Book/Report › Ph.D. thesis › Research

  46. Published

    Cover crop root morphology rather than quality controls the fate of root and rhizodeposition C into distinct soil C pools

    Engedal, Tine, Magid, Jakob, Hansen, Veronika, Rasmussen, J., Sørensen, Helle & Jensen, Lars Stoumann, 2023, In: Global Change Biology. 29, 19, p. 5677-5690 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Legume-based cover crop mixtures can overcome trade-offs between C inputs, soil mineral N depletion and residual yield effects

    Engedal, Tine, Karlsson, M., Andersen, Maria Skovgaard, Rasmussen, J., Thorup-Kristensen, Kristian, Jensen, Lars Stoumann, Magid, Jakob & Hansen, Veronika, 2023, In: Agriculture, Ecosystems and Environment. 349, 12 p., 108408.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Expression, receptor binding, and biophysical characterization of guinea pig insulin desB30: a monomeric insulin variant

    Engholm, E., Hansen, Thomas Hesselhøj, Johansson, E., Strauss, H. M., Vinther, T. N., Jensen, Knud Jørgen, Hubálek, F. & Kjeldsen, T. B., 2015, In: ChemBioChem. 16, 6, p. 954-958 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Characterization of two genes encoding metal tolerance proteins from Beta vulgaris subspecies maritima that confers manganese tolerance in yeast

    Erbasol, I., Bozdag, G. O., Koc, A., Pedas, P. & Karakaya, H. C., 2013, In: BioMetals. 26, 5, p. 795-804 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    The slippery slope of cisgenesis

    Eriksson, U. D., Stymne, S. & Schjoerring, Jan K., 2014, In: Nature Biotechnology. 32, 1 p., 727.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

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