Section for Molecular Plant Biology

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  1. 2024
  2. Published

    An UMAMIT-GTR transporter cascade controls glucosinolate seed loading in Arabidopsis

    Sanden, Niels Christian Holm, Kanstrup, Christa, Crocoll, C., Schulz, Alexander, Nour-Eldin, Hussam Hassan, Halkier, Barbara Ann & Xu, Deyang, 2024, In: Nature Plants. 10, p. 172-179

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Inverse pH Gradient-Assay for Facile Characterization of Proton-Antiporters in Xenopus Oocytes

    Belew, Zeinu Mussa, Kanstrup, Christa, Hua, C., Crocoll, C. & Nour-Eldin, Hussam Hassan, 2024, In: Membranes. 14, 2, 11 p., 39.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. 2023
  5. Published

    A ribose world: current status and future challenges of plant RNA biology

    Marquardt, Sebastian & Manavella, P. A., 2023, In: Journal of Experimental Botany. 74, 7, p. 2203-2207 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    An ancient metabolite damage-repair system sustains photosynthesis in plants

    Leister, D., Sharma, A., Kerber, N., Nägele, T., Reiter, B., Pasch, V., Beeh, S., Jahns, P., Barbato, R., Pribil, Mathias & Rühle, T., 2023, In: Nature Communications. 14, 12 p., 3023.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Approaches and determinants to sustainably improve crop production

    Gojon, A., Nussaume, L., Luu, D. T., Murchie, E. H., Baekelandt, A., Saltenis, Vandasue, Cohan, J., Desnos, T., Inze, D., Ferguson, J. N., Guiderdonni, E., Krapp, A., Lankhorst, R. K., Maurel, C., Rouached, H., Parry, M. A. J., Pribil, Mathias, Scharff, L. B. & Nacry, P., 2023, In: Food and Energy Security. 12, 1, 23 p., e369.

    Research output: Contribution to journal › Review › Research › peer-review

  8. Published

    Artificial Fluorescent Glucosinolates (F-GSLs) Are Transported by the Glucosinolate Transporters GTR1/2/3

    Kanstrup, Christa, Jimidar, C. C., Tomas, J., Cutolo, G., Crocoll, C., Schuler, M., Klahn, P., Tatibouët, A. & Nour-Eldin, Hussam Hassan, 2023, In: International Journal of Molecular Sciences. 24, 2, 26 p., 920.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Biotechnological detoxification: an unchanging source-sink balance strategy for crop improvement

    Liu, Y., Nour-Eldin, Hussam Hassan, Zhang, L., Li, Z., Fernie, A. R. & Ren, M., 2023, In: Trends in Plant Science. 28, 2, p. 135-138

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Comparison of pharmacokinetic study profiles of insulin in rat plasma through conventional sampling and microsampling by micro-LC-MS/MS

    Troché, Gaudry Bruno, Søeborg, T., Bödvarsdottir, T. B., Bjelke, M. & Nielsen, Nikoline Juul, 2023, In: Bioanalysis. 15, 5, p. 283-294 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Cotranscriptional RNA processing and modification in plants

    Marquardt, Sebastian, Petrillo, E. & Manavella, P. A., 2023, In: The Plant Cell. 35, 6, p. 1654-1670

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    CropBooster-P: Towards a roadmap for plant research to future-proof crops in Europe

    Baekelandt, A., Saltenis, Vandasue, Pribil, Mathias, Nacry, P., Harbinson, J., Rolland, N., Wilhelm, R., Davies, J., Inze, D., Parry, M. A. J. & Lankhorst, R. K., 2023, In: Food and Energy Security. 12, 1, 9 p., e428.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Defense priming in cabbage (Brassica oleracea) by insect-pathogenic fungi

    Qing, Y., Ourry, Morgane, Burow, Meike, Meyling, Nicolai Vitt & Hauser, T. P., 2023, In: Arthropod-Plant Interactions. 17, p. 275-287

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Effects of lithium on morpho-physiological and ionomic traits in Cannabis sativa L. microshoots under in vitro conditions

    Zacchini, M., Gullotta, Giorgio, D'Onofrio, G., Bertolotto, P., Massimi, L. & Pietrini, F., 2023, In: Plant Cell, Tissue and Organ Culture. 155, p. 873-882

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Epidermal bladder cells as a herbivore defense mechanism

    Moog, Max William, Yang, X., Bendtsen, Amalie Kofoed, Dong, L., Crocoll, C., Imamura, T., Mori, M., Cushman, J. C., Kant, M. R. & Palmgren, Michael, 2023, In: Current Biology. 33, 21, p. 4662-4673.e6 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Exploiting photosynthesis-driven P450 activity to produce indican in tobacco chloroplasts

    Mellor, Silas Busck, Behrendorff, J. B. Y. H., Ipsen, J. O., Crocoll, C., Laursen, Tomas, Gillam, E. M. J. & Pribil, Mathias, 2023, In: Frontiers in Plant Science. 13, 17 p., 1049177.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Export of defensive glucosinolates is key for their accumulation in seeds

    Xu, Deyang, Sanden, Niels Christian Holm, Hansen, Line Lykke, Belew, Zeinu Mussa, Madsen, S. R., Meyer, L., Jørgensen, M. E., Hunziker, P., Veres, D., Crocoll, C., Schulz, Alexander, Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2023, In: Nature. 617, p. 132-138

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Functional Variation in the Non-Coding Genome: Molecular Implications for Food Security

    Gullotta, Giorgio, Korte, A. & Marquardt, Sebastian, 2023, In: Journal of Experimental Botany. 74, 7, p. 2338–2351 14 p.

    Research output: Contribution to journal › Review › Research › peer-review

  19. Published

    GET-Mediated Export of Defensive Glucosinolates is Key for Seed Accumulation

    Xu, Deyang, Sanden, Niels Christian Holm, Hansen, Line Lykke, Belew, Zeinu Mussa, Madsen, S. R., Meyer, L., Jørgensen, M. E., Hunziker, P., Veres, D., Crocoll, C., Schulz, Alexander, Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2023.

    Research output: Contribution to conference › Conference abstract for conference › Research

  20. Published

    Gibberellin and abscisic acid transporters facilitate endodermal suberin formation in Arabidopsis

    Binenbaum, J., Wulff, N., Camut, L., Kiradjiev, K., Anfang, M., Tal, I., Vasuki, H., Zhang, Y., Sakvarelidze-Achard, L., Davière, J. M., Ripper, D., Carrera, E., Manasherova, E., Ben Yaakov, S., Lazary, S., Hua, C., Novak, V., Crocoll, C., Weinstain, R., Cohen, H. & 6 others, Ragni, L., Aharoni, A., Band, L. R., Achard, P., Nour-Eldin, Hussam Hassan & Shani, E., 2023, In: Nature Plants. 9, 5, p. 785-802 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Glucosinolate Catabolism Maintains Glucosinolate Profiles and Transport in Sulfur-Starved Arabidopsis

    Zhang, L., Kawaguchi, R., Enomoto, T., Nishida, S., Burow, Meike & Maruyama-nakashita, A., 2023, In: Plant and Cell Physiology. 64, 12, p. 1534-1550

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Heterologous expression of PtAAS1 reveals the metabolic potential of the common plant metabolite phenylacetaldehyde for auxin synthesis in planta

    Günther, Jan, Halitschke, R., Gershenzon, J. & Burow, Meike, 2023, In: Physiologia Plantarum. 175, 6, 10 p., e14078.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Identification of key amino acid residues in AtUMAMIT29 for transport of glucosinolates

    Meyer, L., Crocoll, C., Halkier, Barbara Ann, Mirza, Osman Asghar & Xu, Deyang, 2023, In: Frontiers in Plant Science. 14, 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Improving crop yield potential: Underlying biological processes and future prospects

    Burgess, A. J., Masclaux-Daubresse, C., Strittmatter, G., Weber, A. P. M., Taylor, S. H., Harbinson, J., Yin, X., Long, S., Paul, M. J., Westhoff, P., Loreto, F., Ceriotti, A., Saltenis, V. L. R., Pribil, M., Nacry, P., Scharff, L. B., Jensen, P. E., Muller, B., Cohan, J. P., Foulkes, J. & 9 others, Rogowsky, P., Debaeke, P., Meyer, C., Nelissen, H., Inzé, D., Klein Lankhorst, R., Parry, M. A. J., Murchie, E. H. & Baekelandt, A., 2023, In: Food and Energy Security. 12, 1, 29 p.

    Research output: Contribution to journal › Review › Research › peer-review

  25. Published

    LncRNA FLAIL affects alternative splicing and represses flowering in Arabidopsis

    Jin, Yu, Ivanov, M., Dittrich, A. N., Nelson, A. D. L. & Marquardt, Sebastian, 2023, In: EMBO Journal. 42, 11, 21 p., e110921.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Multi-Knock—a multi-targeted genome-scale CRISPR toolbox to overcome functional redundancy in plants

    Hu, Y., Patra, P., Pisanty, O., Shafir, A., Belew, Z. M., Binenbaum, J., Ben Yaakov, S., Shi, B., Charrier, L., Hyams, G., Zhang, Y., Trabulsky, M., Caldararu, O., Weiss, D., Crocoll, C., Avni, A., Vernoux, T., Geisler, M., Nour-Eldin, H. H., Mayrose, I. & 1 others, Shani, E., 2023, In: Nature Plants. 9, 4, p. 572-587 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Paving the way towards future-proofing our crops

    Baekelandt, A., Saltenis, V. L. R., Nacry, P., Malyska, A., Cornelissen, M., Nanda, A. K., Nair, A., Rogowsky, P., Pauwels, L., Muller, B., Collén, J., Blomme, J., Pribil, M., Scharff, L. B., Davies, J., Wilhelm, R., Rolland, N., Harbinson, J., Boerjan, W., Murchie, E. H. & 7 others, Burgess, A. J., Cohan, J. P., Debaeke, P., Thomine, S., Inzé, D., Lankhorst, R. K. & Parry, M. A. J., 2023, In: Food and Energy Security. 12, 3, 19 p., e441.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Phytoalexins of the crucifer Barbarea vulgaris: Structural profile and correlation with glucosinolate turnover

    Cárdenas, Pablo D., Landtved, J. P., Larsen, S. H., Lindegaard, Nicolai, Wøhlk, S., Jensen, Karen Rysbjerg, Pattison, David, Burow, Meike, Bak, Søren, Crocoll, C. & Agerbirk, Niels, 2023, In: Phytochemistry. 213, 17 p., 113742.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Polygenic pathogen networks influence transcriptional plasticity in the Arabidopsis-Botrytis pathosystem

    Krishnan, Parvathy, Caseys, C., Soltis, N., Zhang, W., Burow, Meike & Kliebenstein, D. J., 2023, In: Genetics. 224, 3

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    SWEET11b transports both sugar and cytokinin in developing barley grains

    Radchuk, V., Belew, Z. M., Gündel, A., Mayer, S., Hilo, A., Hensel, G., Sharma, R., Neumann, K., Ortleb, S., Wagner, S., Muszynska, A., Crocoll, C., Xu, D., Hoffie, I., Kumlehn, J., Fuchs, J., Peleke, F. F., Szymanski, J. J., Rolletschek, H., Nour-Eldin, H. H. & 1 others, Borisjuk, L., 2023, In: The Plant Cell. 35, 6, p. 2186-2207 22 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Self-Assembly of Nanofilaments in Cyanobacteria for Protein Co-localization

    Zedler, J. A. Z., Schirmacher, A. M., Russo, D. A., Hodgson, L., Gundersen, E., Matthes, A., Frank, S., Verkade, P. & Jensen, Poul Erik, 2023, In: ACS Nano. 17, 24, p. 25279-25290 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Systematic engineering pinpoints a versatile strategy for the expression of functional cytochrome P450 enzymes in Escherichia coli cell factories

    Poborsky, Michal, Crocoll, C., Motawie, Mohammed Saddik & Halkier, Barbara Ann, 2023, In: Microbial Cell Factories. 22, 10 p., 219.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    The aerial epidermis is a major site of quinolizidine alkaloid biosynthesis in narrow-leafed lupin

    Frick, Karen Michiko, Lorensen, Marcus Daniel B B, Esteban, E., Pasha, A., Schulz, Alexander, Provart, N. J., Janfelt, Christian, Nour-Eldin, Hussam Hassan & Geu-Flores, Fernando, 2023, bioRxiv, 18 p.

    Research output: Working paper › Preprint › Research

  34. Published

    Trichoderma harzianum Peptaibols Stimulate Plant Plasma Membrane H+-ATPase Activity

    Bjørk, Peter Klemmed, Johansen, Nicolai Tidemand, Havshøi, N. W., Rasmussen, S. A., Ipsen, J. Ø., Isbrandt, T., Larsen, T. O. & Fuglsang, Anja Thoe, 2023, In: ACS Omega. 8, 38, p. 34928-34937 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. 2022
  36. Published

    Harnessing beneficial microbes from Danish natural soils to biostimulate plant nutrition

    Xu, Deyang, Dethier, L. & Halkier, Barbara Ann, 13 Nov 2022.

    Research output: Contribution to conference › Conference abstract for conference › Research

  37. Published

    A fungal lytic polysaccharide monooxygenase is required for cell wall integrity, thermotolerance, and virulence of the fungal human pathogen Cryptococcus neoformans

    Probst, C., Hallas-Møller, Magnus, Ipsen, J. Ø., Brooks, J. T., Andersen, Karsten Wiberg, Haon, M., Berrin, J., Martens, Helle Jakobe, Nichols, C. B., Johansen, Katja Salomon & Alspaugh, J. A., 2022, bioRxiv, 70 p.

    Research output: Working paper › Preprint › Research

  38. Published

    A plant balancing act: Meshing new and existing metabolic pathways towards an optimized system

    Angelovici, R. & Kliebenstein, D., 2022, In: Current Opinion in Plant Biology. 66, 102173.

    Research output: Contribution to journal › Review › Research › peer-review

  39. Published

    ATP hydrolytic activity of purified Spf1p correlate with micellar lipid fluidity and is dependent on conserved residues in transmembrane helix M1

    Ipsen, J. Ø. & Sørensen, D. M., 2022, In: PLoS ONE. 17, 10, 18 p., e0274908.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Aphid Species and Feeding Location on Canola Influences the Impact of Glucosinolates on a Native Lady Beetle Predator

    Cibils-Stewart, X., Kliebenstein, D. J., Li, B., Giles, K., McCornack, B. P. & Nechols, J., 2022, In: Environmental Entomology. 51, 1, p. 52-62 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Clopyralid applied to winter oilseed rape (Brassica napus L.) contaminates the food products nectar, honey and pollen

    Hansted, L., Crocoll, C., Bitarafan, Z. & Andreasen, Christian, 2022, In: Food Control. 140, 7 p., 109124.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Comparison of Genome and Plasmid-Based Engineering of Multigene Benzylglucosinolate Pathway in Saccharomyces cerevisiae

    Wang, Cuiwei, Poborsky, Michal, Crocoll, C., Nødvig, C. S., Mortensen, U. H. & Halkier, Barbara Ann, 2022, In: Applied and Environmental Microbiology. 88, 22, 15 p., e00978-22.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Cyanogenesis in the Sorghum Genus: From Genotype to Phenotype

    Cowan, M., Møller, Birger Lindberg, Norton, S., Knudsen, C., Crocoll, C., Furtado, A., Henry, R., Blomstedt, C. & Gleadow, R. M., 2022, In: Genes. 13, 17 p., 140.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Cytosolic phosphofructokinases are important for sugar homeostasis in leaves of Arabidopsis thaliana

    Perby, L. K., Richter, S., Weber, K., Hieber, A. J., Hess, N., Crocoll, C., Mogensen, Helle Kildal, Pribil, Mathias, Burow, Meike, Nielsen, T. H. & Mustroph, A., 2022, In: Annals of Botany. 129, 1, p. 37-52

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Elucidation of the structure-function relationship in the Nitrate and Peptide Transporter Family

    Kanstrup, Christa, 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 189 p.

    Research output: Book/Report › Ph.D. thesis › Research

  46. Published

    Engineering Escherichia coli towards production of plant specialized metabolites

    Poborsky, Michal, 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 129 p.

    Research output: Book/Report › Ph.D. thesis › Research

  47. Published

    Epigenetic Impact on Plant Plasticity

    Aller, Emma Sofie Timm, 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 175 p.

    Research output: Book/Report › Ph.D. thesis › Research

  48. Published

    Expanding the toolbox for Synthetic Biology by plant-derived modules: From protein expression regulation to protein scaffolding

    Borràs I Gas, G., 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 131 p.

    Research output: Book/Report › Ph.D. thesis › Research

  49. Published

    FIONA1-mediated methylation of the 3'UTR of FLC affects FLC transcript levels and flowering in Arabidopsis

    Sun, B., Bhati, K. K., Song, P., Edwards, Ashleigh Katrina, Petri, Louise, Kruusvee, Valdeko, Blaakmeer, A., Dolde, U., Rodrigues, V., Straub, D., Yang, J., Jia, G. & Wenkel, Stephan, 2022, In: PLOS Genetics. 18, 9, 22 p., e1010386.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Genetic variation underlying differential ammonium and nitrate responses in Arabidopsis thaliana

    Katz, E., Knapp, A., Lensink, M., Keller, C. K., Stefani, J., Li, J., Shane, E., Tuermer-Lee, K., Bloom, A. J. & Kliebenstein, D. J., 2022, In: The Plant Cell. 34, 12, p. 4696-4713

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Gibberellin and abscisic acid transporters facilitate endodermal suberin formation in Arabidopsis

    Binenbaum, J., Wulff, N., Camut, L., Kiradjiev, K., Tal, I., Vasuki, H., Anfang, M., Zhang, Y., Sakvarelidze-Achard, L., Davière, J., Ripper, D., Bergua, E., Nour-Eldin, Hussam Hassan & Shani, E., 2022.

    Research output: Working paper › Preprint › Research

  52. Published

    Heterologous expression of PtAAS1reveals the metabolic potential of the common plant metabolite phenylacetaldehyde for auxin synthesis in planta

    Günther, Jan, Halitschke, R., Gershenzon, J. & Burow, Meike, 2022, bioRxiv.

    Research output: Working paper › Preprint › Research

  53. Published

    Histone chaperone ASF1 mediates H3.3-H4 deposition in Arabidopsis

    Zhong, Z., Wang, Y., Wang, M., Yang, F., Thomas, Quentin, Xue, Y., Zhang, Y., Liu, W., Jami-Alahmadi, Y., Xu, L., Feng, S., Marquardt, Sebastian, Wohlschlegel, J. A., Ausin, I. & Jacobsen, S. E., 2022, In: Nature Communications. 13, 15 p., 6970.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Identification of new proteins in mature sieve elements

    Sanden, Niels Christian Holm & Schulz, Alexander, 2022, In: Physiologia Plantarum. 174, 1, e13634.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Loss of a pyridoxal-phosphate phosphatase rescues Arabidopsis lacking an endoplasmic reticulum ATP carrier

    Altensell, J., Wartenberg, R., Haferkamp, I., Hassler, S., Scherer, V., Steensma, P., Fitzpatrick, T. B., Sharma, A., Sandoval-Ibanez, O., Pribil, Mathias, Lehmann, M., Leister, D., Kleine, T. & Neuhaus, H. E., 2022, In: Plant Physiology. 189, 1, p. 49-65 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    Parasitic plant small RNA analyses unveil parasite-specific signatures of microRNA retention, loss, and gain

    Zangishei, Z., Annacondia López, María Luz, Gundlach, H., Didriksen, A., Bruckmüller, J., Salari, H., Krause, K. & Martinez, G., 2022, In: Plant Physiology. 190, 2, p. 1242-1259

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Plant Responses Underlying Timely Specialized Metabolites Induction of Brassica Crops

    Doghri, M., Rodríguez, V. M., Kliebenstein, D. J. & Francisco, M., 2022, In: Frontiers in Plant Science. 12, 11 p., 807710.

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    Prospects to improve the nutritional quality of crops. Food and Energy Security

    Scharff, L., Saltenis, V. L. R., Jensen, P. E., Baekelandt, A., Burgess, A. J., Burow, M., Ceriotti, A., Cohan, J-P., Geu-Flores, F., Halkier, B. A., Haslam, R. P., Inzé, D., Lankhorst, R. K., Murchie, E., Napier, J. A., Nacry, P., Parry, M. A. J., Santino, A., Scarano, A., Sparvoli, F. & 2 others, Wilhelm, R. & Pribil, Mathias, 2022, In: Food and Energy Security. 11, 1, 14 p., e327.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    Protonation State of an Important Histidine from High Resolution Structures of Lytic Polysaccharide Monooxygenases

    Banerjee, S., Muderspach, Sebastian Jannick, Tandrup, T., Frandsen, Kristian Erik Høpfner, Singh, R. K., Ipsen, J. O., Hernandez Rollan, Cristina, Nørholm, M. H. H., Bjerrum, Morten Jannik, Johansen, Katja Salomon & Lo Leggio, Leila, 2022, In: Biomolecules. 12, 2, 15 p., 194.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    R-loops at microRNA encoding loci promote co-transcriptional processing of pri-miRNAs in plants

    Gonzalo, L., Tossolini, I., Gulanicz, T., Cambiagno, D. A., Kasprowicz-Maluski, A., Smolinski, D. J., Mammarella, M. F., Ariel, F. D., Marquardt, Sebastian, Szweykowska-Kulinska, Z., Jarmolowski, A. & Manavella, P. A., 2022, In: Nature Plants. 8, 4, p. 402-418 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Structural Insights into the Substrate Transport Mechanisms in GTR Transporters through Ensemble Docking

    Peña‐Varas, C., Kanstrup, Christa, Vergara‐jaque, A., González‐avendaño, M., Crocoll, C., Mirza, Osman Asghar, Dreyer, I., Nour-Eldin, Hussam Hassan & Ramírez, D., 2022, In: International Journal of Molecular Sciences. 23, 3, 20 p., 1595.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Structure-guided engineering of key amino acids in UGT85B1 controlling substrate and stereo-specificity in aromatic cyanogenic glucoside biosynthesis

    Del Giudice, R., Putkaradze, N., dos Santos, B. M., Hansen, Cecilie Ida Cetti, Crocoll, C., Motawie, Mohammed Saddik, Fredslund, F., Laursen, Tomas & Welner, D. H., 2022, In: Plant Journal. 111, 6, p. 1539-1549

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    The Circadian Clock Gene Circuit Controls Protein and Phosphoprotein Rhythms in Arabidopsis thaliana

    Krahmer, J., Hindle, M., Perby, L. K., Mogensen, Helle Kildal, Nielsen, T. H., Halliday, K. J., van Ooijen, G., Le Bihan, T. & Millar, A. J., 2022, In: Molecular and Cellular Proteomics. 21, 1, 20 p., 100172.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    The biological function and regulation of non-coding transcription originating from bi-directional promoters

    du Mee, D. J. M., 2022, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 170 p.

    Research output: Book/Report › Ph.D. thesis › Research

  65. Published

    The ease and complexity of identifying and using specialized metabolites for crop engineering

    Muhich, A. J., Agosto-Ramos, A. & Kliebenstein, D. J., 2022, In: Emerging topics in life sciences. 6, p. 153-162 10 p.

    Research output: Contribution to journal › Review › Research › peer-review

  66. Published

    The emerging role of the nitrate and peptide transporter family: NPF in plant specialized metabolism

    Kanstrup, Christa & Nour-Eldin, Hussam Hassan, 2022, In: Current Opinion in Plant Biology. 68, 10 p., 102243.

    Research output: Contribution to journal › Review › Research › peer-review

  67. Published

    The ins and outs of transporters at plasma membrane and tonoplast in plant specialized metabolism: [Correction]

    Xu, Deyang & Halkier, Barbara Ann, 2022, In: Natural Product Reports. 39, 7, p. 1483-1491

    Research output: Contribution to journal › Review › Research › peer-review

  68. Published

    Transport engineering in microbial cell factories producing plant-specialized metabolites

    Belew, Zeinu Mussa, Poborsky, Michal, Nour-Eldin, Hussam Hassan & Halkier, Barbara Ann, 2022, In: Current Opinion in Green and Sustainable Chemistry. 33, 100576.

    Research output: Contribution to journal › Review › Research › peer-review

  69. 2021
  70. Published

    Arabidopsis thaliana transcription factors MYB28 and MYB29 shape ammonium stress responses by regulating Fe homeostasis

    Coleto, I., Bejarano, I., Marin-Pena, A. J., Medina, J., Rioja, C., Burow, Meike & Marino, D., 2021, In: New Phytologist. 229, 2, p. 1021-1035 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    A Novel CYP2C-Haplotype Associated With Ultrarapid Metabolism of Escitalopram

    Bråten, L. S., Haslemo, T., Jukic, M. M., Ivanov, M., Ingelman-Sundberg, M., Molden, E. & Kringen, M. K., 2021, In: Clinical Pharmacology and Therapeutics. 110, 3, p. 786-793

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    A genome-scale TF–DNA interaction network of transcriptional regulation of Arabidopsis primary and specialized metabolism

    Tang, M., Li, B., Zhou, X., Bolt, T., Li, J. J., Cruz, N., Gaudinier, A., Ngo, R., Clark-Wiest, C., Kliebenstein, D. J. & Brady, S. M., 2021, In: Molecular Systems Biology. 17, 11, 19 p., e10625.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    A microProtein repressor complex in the shoot meristem controls the transition to flowering

    Rodrigues, V. L., Dolde, U., Sun, B., Blaakmeer, A., Straub, D., Eguen, T., Botterweg-Paredes, E., Hong, S., Graeff, M., Li, M. W., Gendron, J. M. & Wenkel, Stephan, 2021, In: Plant Physiology. 187, 1, p. 187-202 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    A study of the spatial distribution patterns of airborne polycyclic aromatic hydrocarbons in crowberry (Empetrum nigrum) in Ilulissat, Greenland

    Kronik, Oskar Munk, Prothmann, J., Troché, Gaudry Bruno, Svensmark, Bo, Nielsen, Nikoline Juul & Christensen, Jan H., 2021, In: Environmental Science and Pollution Research. 28, p. 23133-23142

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    ABA homeostasis and long-distance translocation are redundantly regulated by ABCG ABA importers

    Zhang, Y., Kilambi, H. V., Liu, J., Bar, H., Lazary, S., Egbaria, A., Ripper, D., Charrier, L., Belew, Zeinu Mussa, Wulff, N., Damodaran, S., Nour-Eldin, Hussam Hassan, Aharoni, A., Ragni, L., Strader, L., Sade, N., Weinstain, R., Geisler, M. & Shani, E., 2021, In: Science Advances. 7, 43, 18 p., eabf6069.

    Research output: Contribution to journal › Journal article › Research › peer-review

  76. Published

    Ancient origin of fucosylated xyloglucan in charophycean green algae

    Mikkelsen, M. D., Harholt, J., Westereng, B., Domozych, D., Fry, S. C., Johansen, I. E., Fangel, J. U., Łężyk, M., Feng, T., Nancke, L., Mikkelsen, J. D., Willats, W. G. T. & Ulvskov, Peter, 2021, In: Communications Biology . 4, 12 p., 754.

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Bioengineering potato plants to produce benzylglucosinolate for improved broad-spectrum pest and disease resistance

    González-Romero, M. E., Rivera, C., Cancino, K., Geu-Flores, Fernando, Cosio, E. G., Ghislain, M. & Halkier, Barbara Ann, 2021, In: Transgenic Research. 30, p. 649-660 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Biotechnology for Tomorrow's World: Scenarios to Guide Directions for Future Innovation

    Cornelissen, M., Małyska, A., Nanda, A. K., Lankhorst, R. K., Parry, M. A. J., Saltenis, Vandasue, Pribil, Mathias, Nacry, P., Inzé, D. & Baekelandt, A., 2021, In: Trends in Biotechnology. 39, 5, p. 438-444

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Published

    CIA2 and CIA2-LIKE are required for optimal photosynthesis and stress responses in Arabidopsis thaliana

    Gawroński, P., Burdiak, P., Scharff, L. B., Mielecki, J., Górecka, M., Zaborowska, M., Leister, D., Waszczak, C. & Karpiński, S., 2021, In: Plant Journal. 105, 3, p. 619-638

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Colorimetric LPMO assay with direct implication for cellulolytic activity

    Brander, Søren, Lausten, S., Ipsen, J., Falkenberg, K. B., Bertelsen, A. B., Nørholm, M. H. H., Østergaard, L. H. & Johansen, Katja Salomon, 2021, In: Biotechnology for Biofuels. 14, 1, 13 p., 51.

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    Copper binding and reactivity at the histidine brace motif: insights from mutational analysis of the Pseudomonas fluorescens copper chaperone CopC

    Ipsen, J. Ø., Hernández‐Rollán, C., Muderspach, Sebastian Jannick, Brander, Søren, Bertelsen, A. B., Jensen, Poul Erik, Nørholm, M. H. H., Lo Leggio, Leila, Johansen, Katja Salomon & Ferguson, S. (ed.), 2021, In: FEBS Letters. 595, 12, p. 1708-1720 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Curvature thylakoid 1 proteins modulate prolamellar body morphology and promote organized thylakoid biogenesis in Arabidopsis thaliana

    Sandoval-Ibáñez, O., Sharma, A., Bykowski, M., Borràs-Gas, G., Behrendorff, J. B. Y. H., Mellor, Silas Busck, Qvortrup, Klaus, Verdonk, J. C., Bock, R., Kowalewska, Ł. & Pribil, Mathias, 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 42, 10 p., e2113934118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    Engineering and optimization of the 2-phenylethylglucosinolate production in Nicotiana benthamiana by combining biosynthetic genes from Barbarea vulgaris and Arabidopsis thaliana

    Wang, Cuiwei, Crocoll, C., Agerbirk, Niels & Halkier, Barbara Ann, 2021, In: Plant Journal. 106, 4, p. 978-992

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    Evolution of A bHLH Interaction Motif

    Millard, P. S., Kragelund, Birthe Brandt & Burow, Meike, 2021, In: International Journal of Molecular Sciences. 22, 1, 18 p., 447.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Fine mapping identifies NAD-ME1 as a candidate underlying a major locus controlling temporal variation in primary and specialized metabolism in Arabidopsis

    Francisco, M., Kliebenstein, D. J., Rodríguez, V. M., Soengas, P., Abilleira, R. & Cartea, M. E., 2021, In: Plant Journal. 106, 2, p. 454-467

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    From Single Cells to Flowers – Biological Complexity Driving Plant Reproductive Development

    Schwarz, Isabel Aimèe, Neumann, M., Vega, R., Xu, X., Cornaro, L., Colombo, L., Vernoux, T., Xu, J., Marquardt, Sebastian & Kaufmann, K., 2021, Preprints.org.

    Research output: Working paper › Preprint › Research

  87. Published

    Functional Significance of Conserved Cysteines in the Extracellular Loops of the ATP Binding Cassette Transporter Pdr11p

    Stanchev, L. D., Marek, M., Xian, F., Klöhn, M., Silvestro, D., Dittmar, G., Lopez Marques, Rosa Laura & Pomorski, Thomas Guenther, 2021, In: Journal of Fungi. 7, 1, 16 p., 2.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Genetic variation, environment and demography intersect to shape Arabidopsis defense metabolite variation across Europe

    Katz, E., Li, J. J., Jaegle, B., Ashkenazy, H., Abrahams, S. R., Bagaza, C., Holden, S., Pires, C. J., Angelovici, R. & Kliebenstein, D. J., 2021, In: eLife. 10, 25 p., e67784.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Genome size evolution is associated with climate seasonality and glucosinolates, but not life history, soil nutrients or range size, across a clade of mustards

    Cacho, N. I., McIntyre, P. J., Kliebenstein, D. J. & Strauss, S. Y., 2021, In: Annals of Botany. 127, 7, p. 887-902 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Herbivore feeding preference corroborates optimal defense theory for specialized metabolites within plants

    Hunziker, P., Lambertz, S. K., Weber, K., Crocoll, C., Halkier, Barbara Ann & Schulz, Alexander, 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 47, e2111977118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  91. Published

    Induction and Priming of Plant Defense by Root-Associated Insect-Pathogenic Fungi

    Cachapa, J. C., Meyling, Nicolai Vitt, Burow, Meike & Hauser, T. P., 2021, In: Journal of Chemical Ecology. 47, p. 112-122 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Inhibition of Lytic Polysaccharide Monooxygenases by Plant Extracts

    Tokin, Radina, 2021, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 156 p.

    Research output: Book/Report › Ph.D. thesis › Research

  93. Published

    Inhibition of lpmos by fermented persimmon juice

    Tokin, Radina, Ipsen, J. Ø., Poojary, Mahesha Manjunatha, Jensen, Poul Erik, Olsson, L. & Johansen, Katja Salomon, 2021, In: Biomolecules. 11, 12, 12 p., 1890.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Inhibition of lytic polysaccharide monooxygenase by natural plant extracts

    Tokin, Radina, Frandsen, Kristian Erik Høpfner, Ipsen, J. Ø., Lo Leggio, Leila, Poojary, Mahesha Manjunatha, Berrin, J., Grisel, S., Brander, Søren, Jensen, Poul Erik & Johansen, Katja Salomon, 2021, In: New Phytologist. 232, 3, p. 1337–1349 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    Light-Dependent Translation Change of Arabidopsis psbA Correlates with RNA Structure Alterations at the Translation Initiation Region

    Gawroński, P., Enroth, Christel Hougård, Kindgren, P., Marquardt, Sebastian, Karpiński, S., Leister, D., Jensen, Poul Erik, Vinther, Jeppe & Scharff, L. B., 2021, In: Cells. 10, 2, 22 p., 322.

    Research output: Contribution to journal › Journal article › Research › peer-review

  96. Published

    LyGo: A Platform for Rapid Screening of Lytic Polysaccharide Monooxygenase Production

    Hernández-rollán, C., Falkenberg, K. B., Rennig, M., Bertelsen, A. B., Ipsen, J. Ø., Brander, Søren, Daley, D. O., Johansen, Katja Salomon & Nørholm, M. H. H., 2021, In: A C S Synthetic Biology. 10, 4, p. 897-906 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    Lytic polysaccharide monooxygenases and other histidine-brace copper proteins: structure, oxygen activation and biotechnological applications

    Ipsen, J., Hallas-Møller, Magnus, Brander, Søren, Lo Leggio, Leila & Johansen, Katja Salomon, 2021, In: Biochemical Society Transactions. 49, 1, p. 531-540 10 p.

    Research output: Contribution to journal › Review › Research › peer-review

  98. Published

    Modulating the activities of chloroplasts and mitochondria promotes ATP production and plant growth

    Voon, C. P., Law, Y., Guan, X., Lim, S., Xu, Z., Chu, W., Zhang, R., Sun, F., Labs, M., Pribil, Mathias, Leister, D., Hronková, M., Kubásek, J., Cui, Y., Jiang, L., Tsuyama, M., Gardeström, P., Tikkanen, M. & Lim, B. L., 2021, 27 p. (bioRxiv).

    Research output: Working paper › Preprint › Research

  99. Published

    Molecular rules and functional roles of noncoding transcription

    Gowthaman, U., 2021, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen. 175 p.

    Research output: Book/Report › Ph.D. thesis › Research

  100. Published

    On the Histidine Brace in Redox Enzymes and Chaperones

    Ipsen, J. Ø., 2021, Department of Geosciences and Natural Resource Management, Faculty of Science, University of Copenhagen. 209 p.

    Research output: Book/Report › Ph.D. thesis › Research

  101. Published

    PSC-db: A Structured and Searchable 3D-Database for Plant Secondary Compounds

    Valdes-Jimenez, A., Pena-Varas, C., Borrego-Munoz, P., Arrue, L., Alegria-Arcos, M., Nour-Eldin, Hussam Hassan, Dreyer, I., Nunez-Vivanco, G. & Ramirez, D., 2021, In: Molecules. 26, 4, 10 p., 1124.

    Research output: Contribution to journal › Journal article › Research › peer-review

  102. Published

    PTR2/POT/NPF transporters: what makes them tick?

    Prabhala, B. K., Rahman, M., Nour-Eldin, Hussam Hassan, Jørgensen, Flemming Steen & Mirza, Osman Asghar, 2021, In: Advances in Protein Chemistry and Structural Biology. 123, p. 219-240 22 p.

    Research output: Contribution to journal › Review › Research › peer-review

  103. Published

    Quantitative interactions: The disease outcome of Botrytis cinerea across the plant kingdom

    Caseys, C., Shi, G., Soltis, N., Gwinner, R., Corwin, J., Atwell, S. & Kliebenstein, D. J., 2021, In: G3: Genes, Genomes, Genetics. 11, 8, 15 p., jkab175.

    Research output: Contribution to journal › Review › Research › peer-review

  104. Published

    Root-type ferredoxin-NADP+ oxidoreductase isoforms in Arabidopsis thaliana: Expression patterns, location and stress responses

    Grabsztunowicz, M., Rantala, M., Ivanauskaite, A., Blomster, T., Koskela, M. M., Vuorinen, K., Tyystjarvi, E., Burow, Meike, Overmyer, K., Mahonen, A. P. & Mulo, P., 2021, In: Plant, Cell and Environment. 44, 2, p. 548-558 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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