Niels Agerbirk

Niels Agerbirk

Associate Professor

Member of:

    ORCID: 0000-0003-4670-8330

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    1 - 50 out of 87Page size: 50
    1. 2024
    2. Published

      Essentials in the acquisition, interpretation, and reporting of plant metabolite profiles

      Çiçek, S. S., Mangoni, A., Hanschen, F. S., Agerbirk, Niels & Zidorn, C., 2024, In: Phytochemistry. 220, 16 p., 114004.

      Research output: Contribution to journal › Review › Research › peer-review

    3. Published

      Identification of Clubroot-Resistant Germplasm in a Radish (Raphanus sativus L.) Core Collection

      Ma, Y., Wang, H., Song, J., Yang, W., Jia, H., Agerbirk, Niels, Chen, Y., Li, C., Piao, Y., Li, S. & Zhang, X., 2024, In: Agronomy. 14, 1, 12 p., 157.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. 2023
    5. Published

      Phytoalexins of the crucifer Barbarea vulgaris: Structural profile and correlation with glucosinolate turnover

      Cárdenas, Pablo D., Landtved, J. P., Larsen, S. H., Lindegaard, Nicolai, Wøhlk, S., Jensen, Karen Rysbjerg, Pattison, David, Burow, Meike, Bak, Søren, Crocoll, C. & Agerbirk, Niels, 2023, In: Phytochemistry. 213, 17 p., 113742.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. 2022
    7. Published

      Ancient biosynthesis in an oil crop: Glucosinulate profiles in Limnanthes alba and its relatives (Limnanthaceae, Brassicales)

      Agerbirk, Niels, Pattison, David, Mandáková, T., Lysak, M. A., Montaut, S. & Stærk, Dan, 2022, In: Journal of Agricultural and Food Chemistry. 70, p. 1134-1147

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. 2021
    9. Published

      Comparison of glucosinolate diversity in the crucifer tribe Cardamineae and the remaining order Brassicales highlights repetitive evolutionary loss and gain of biosynthetic steps

      Agerbirk, Niels, Hansen, Cecilie Ida Cetti, Kiefer, C., Hauser, T. P., Ørgaard, Marian, Lange, Conny Bruun Asmussen, Cipollini, D. & Koch, M. A., 2021, In: Phytochemistry. 185, 112668.

      Research output: Contribution to journal › Review › Research › peer-review

    10. Published

      Development and application of a virus-induced gene silencing protocol for the study of gene function in narrow-leafed lupin

      Mancinotti, Davide, Rodriguez, M. C., Frick, Karen Michiko, Dueholm, B., Jepsen, D. G., Agerbirk, Niels & Geu-Flores, Fernando, 2021, In: Plant Methods. 17, 1, 13 p., 131.

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. Published

      Engineering and optimization of the 2-phenylethylglucosinolate production in Nicotiana benthamiana by combining biosynthetic genes from Barbarea vulgaris and Arabidopsis thaliana

      Wang, Cuiwei, Crocoll, C., Agerbirk, Niels & Halkier, Barbara Ann, 2021, In: Plant Journal. 106, 4, p. 978-992

      Research output: Contribution to journal › Journal article › Research › peer-review

    12. Published

      Glucosinolate profiles and phylogeny in Barbarea compared to other tribe Cardamineae (Brassicaceae) and Reseda (Resedaceae), based on a library of ion trap HPLC-MS/MS data of reference desulfoglucosinolates

      Agerbirk, Niels, Hansen, Cecilie Ida Cetti, Olsen, C. E., Kiefer, C., Hauser, T. P., Christensen, S., Jensen, Karen Rysbjerg, Ørgaard, Marian, Pattison, David, Lange, Conny Bruun Asmussen, Cipollini, D. & Koch, M. A., 2021, In: Phytochemistry. 185, 112658.

      Research output: Contribution to journal › Journal article › Research › peer-review

    13. 2020
    14. Published

      Characterization of Arabidopsis CYP79C1 and CYP79C2 by Glucosinolate Pathway Engineering in Nicotiana benthamiana Shows Substrate Specificity Toward a Range of Aliphatic and Aromatic Amino Acids

      Wang, Cuiwei, Dissing, M. M., Agerbirk, Niels, Crocoll, C. & Halkier, Barbara Ann, 2020, In: Frontiers in Plant Science. 11, 13 p., 57.

      Research output: Contribution to journal › Journal article › Research › peer-review

    15. Published

      Glucosinolate structural diversity, identification, chemical synthesis and metabolism in plants

      Blažević, I., Montaut, S., Burčul, F., Olsen, C. E., Burow, Meike, Rollin, P. & Agerbirk, Niels, 2020, In: Phytochemistry. 169, 57 p., 112100.

      Research output: Contribution to journal › Review › Research › peer-review

    16. Published

      Making use of surplus sugar

      Agerbirk, Niels, 2020, In: Nature Chemical Biology. 16, 12, p. 1283-1284 2 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    17. 2019
    18. Published

      A high-density genetic map and QTL mapping of leaf traits and glucosinolates in Barbarea vulgaris

      Liu, T. J., Zhang, Y. J., Agerbirk, Niels, Wang, H. P., Wei, X. C., Song, J. P., He, H. J., Zhao, X. Z., Zhang, X. H. & Li, X. X., 14 May 2019, In: BMC Genomics. 20, 1, p. 1-14 371.

      Research output: Contribution to journal › Journal article › Research › peer-review

    19. Published

      Different herbivore responses to two co-occurring chemotypes of the wild crucifer Barbarea vulgaris

      Christensen, S., Enge, S., Jensen, Karen Rysbjerg, Müller, C., Kiær, Lars Pødenphant, Agerbirk, Niels, Heimes, C. & Hauser, T. P., 15 Feb 2019, In: Arthropod-Plant Interactions. 13, 1, p. 19-30 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. 2018
    21. Published

      A tandem array of UDP-glycosyltransferases from the UGT73C subfamily glycosylate sapogenins, forming a spectrum of mono- and bisdesmosidic saponins

      Erthmann, P. Ø., Agerbirk, Niels & Bak, Søren, 2018, In: Plant Molecular Biology. 97, 1-2, p. 37-55 19 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Published

      Glucosinolate turnover in Brassicales species to an oxazolidin-2-one, formed via the 2-thione and without formation of thioamide

      Agerbirk, Niels, Matthes, A., Erthmann, P. Ø., Ugolini, L., Cinti, S., Lazaridi, E., Nuzillard, J., Mueller, C., Bak, Søren, Rollin, P. & Lazzeri, L., 2018, In: Phytochemistry. 153, p. 79-93

      Research output: Contribution to journal › Journal article › Research › peer-review

    23. Published

      The Role of the Glucosinolate-Myrosinase System in Mediating Greater Resistance of Barbarea verna than B. vulgaris to Mamestra brassicae Larvae

      Mueller, C., Schulz, M., Pagnotta, E., Ugolini, L., Yang, T., Matthes, A., Lazzeri, L. & Agerbirk, Niels, 2018, In: Journal of Chemical Ecology. 44, 12, p. 1190-1205

      Research output: Contribution to journal › Journal article › Research › peer-review

    24. 2017
    25. Published

      Hydroxyl and methoxyl derivatives of benzylglucosinolate in Lepidium densiflorum with hydrolysis to isothiocyanates and non-isothiocyanate products: substitution governs product type and mass spectral fragmentation

      Pagnotta, E., Agerbirk, Niels, Olsen, C. E., Ugolini, L., Cinti, S. & Lazzeri, L., 2017, In: Journal of Agricultural and Food Chemistry. 65, 15, p. 3167-3178 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    26. Published

      The genome sequence of Barbarea vulgaris facilitates the study of ecological biochemistry

      Byrne, S. L., Erthmann, P. Ø., Agerbirk, Niels, Bak, Søren, Hauser, T. P., Nagy, I., Paina, C. & Asp, T., 2017, In: Scientific Reports. 7, 14 p., 40728.

      Research output: Contribution to journal › Journal article › Research › peer-review

    27. 2016
    28. Published

      Aromatic glucosinolate biosynthesis pathway in Barbarea vulgaris and its response to Plutella xylostella infestation

      Liu, T., Zhang, X., Yang, H., Agerbirk, Niels, Qiu, Y., Wang, H., Shen, D., Song, J. & Li, X., 2016, In: Frontiers in Plant Science. 7, 15 p., 83.

      Research output: Contribution to journal › Journal article › Research › peer-review

    29. Published

      Ecotypic differentiation of two sympatric chemotypes of Barbarea vulgaris (Brassicaceae) with different biotic resistances

      Heimes, C., Agerbirk, Niels, Sørensen, Helle, van Mölken, T. & Hauser, T. P., 2016, In: Plant Ecology. 217, 9, p. 1055-1068 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    30. Published

      Glucosinolate diversity within a phylogenetic framework of the tribe Cardamineae (Brassicaceae) unraveled with HPLC-MS/MS and NMR-based analytical distinction of 70 desulfoglucosinolates

      Olsen, C. E., Huang, X., Hansen, Cecilie Ida Cetti, Cipollini, D., Ørgaard, Marian, Matthes, A., Geu-Flores, Fernando, Koch, M. A. & Agerbirk, Niels, 2016, In: Phytochemistry. 132, p. 33-56 24 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    31. Published

      Methyl transfer in glucosinolate biosynthesis mediated by indole glucosinolate O-Methyltransferase 5

      Pfalz, M., Mukhaimar, M., Perreau, F., Kirk, J., Hansen, Cecilie Ida Cetti, Olsen, C. E., Agerbirk, Niels & Kroymann, J., 2016, In: Plant Physiology. 172, 4, p. 2190-2203 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    32. 2015
    33. Published

      A recycling pathway for cyanogenic glycosides evidenced by the comparative metabolic profiling in three cyanogenic plant species

      Picmanova, M., Neilson, Elizabeth Heather Jakobsen, Motawie, Mohammed Saddik, Olsen, C. E., Agerbirk, Niels, Gray, C. J., Flitsch, S., Meier, S., Silvestro, D., Jørgensen, Kirsten, Sánchez Pérez, R., Møller, Birger Lindberg & Bjarnholt, Nanna, 2015, In: Biochemical Journal. 469, 3, p. 375-389 15 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    34. Published

      Derivatization of isothiocyanates and their reactive adducts for chromatographic analysis

      Agerbirk, Niels, De Nicola, G. R., Olsen, C. E., Mueller, C. & Iori, R., 2015, In: Phytochemistry. 118, p. 109-115 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    35. Published

      Diversified glucosinolate metabolism: biosynthesis of hydrogen cyanide and of the hydroxynitrile glucoside alliarinoside in relation to sinigrin metabolism in Alliaria petiolata

      Frisch, T., Motawie, Mohammed Saddik, Olsen, C. E., Agerbirk, Niels, Møller, Birger Lindberg & Bjarnholt, Nanna, 2015, In: Frontiers in Plant Science. 6, 16 p., 926.

      Research output: Contribution to journal › Journal article › Research › peer-review

    36. Published

      Expression patterns, molecular markers and genetic diversity of insect-susceptible and resistant Barbarea genotypes by comparative trnscriptome analysis

      Zhang, X., Liu, T., Wei, X., Qiu, Y., Song, J., Wang, H., Shen, D., Agerbirk, Niels & Li, X., 2015, In: B M C Genomics. 16, 16 p., 486.

      Research output: Contribution to journal › Journal article › Research › peer-review

    37. Published

      Glucosinolate hydrolysis products in the crucifer Barbarea vulgaris include a thiazolidine-2-one from a specific phenolic isomer as well as oxazolidine-2-thiones

      Agerbirk, Niels & Olsen, C. E., 2015, In: Phytochemistry. 115, p. 143-151 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    38. Published

      Multiple hydroxyphenethyl glucosinolate isomers and their tandem mass spectrometric destinction in a geographically structured polymorphism in the crucifer Barbarea vulgaris

      Agerbirk, Niels, Olsen, C. E., Heimes, C., Christensen, S., Bak, Søren & Hauser, T. P., 2015, In: Phytochemistry. 115, p. 130-142 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    39. Published

      Taste detection of the non-volatile isothiocyanate moringin results in deterrence to glucosinolate-adapted insect larvae

      Müller, C., van Loon, J., Ruschioni, S., De Nicola, G. R., Olsen, C. E., Iori, R. & Agerbirk, Niels, 2015, In: Phytochemistry. 118, p. 139-148 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    40. 2014
    41. Published

      Acylated glucosinolates with diverse acyl groups investigated by high resolution mass spectrometry and infrared multiphoton dissociation

      Bianco, G., Agerbirk, Niels, Losito, I. & Cataldi, T. R. I., 2014, In: Phytochemistry. 100, p. 92-102 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    42. Published

      Different geographical distributions of two chemotypes of Barbera vulgaris that differ in resistance to insects and a pathogen

      Christensen, S., Heimes, C., Agerbirk, Niels, Poulsen, V. K., Olsen, C. E. & Hauser, T. P., 2014, In: Journal of Chemical Ecology. 40, 5, p. 491-501 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    43. Published

      Glucosinolate-related glucosides in Alliaria petiolata: sources of variation in the plant and different metabolism in an adapted specialist herbivore, Pieris rapae

      Frisch, T., Agerbirk, Niels, Davis, S., Cipollini, D., Olsen, C. E., Motawie, Mohammed Saddik, Bjarnholt, Nanna & Møller, Birger Lindberg, 2014, In: Journal of Chemical Ecology. 40, 10, p. 1063-1079 17 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    44. Published

      Specific glucosinolate analysis reveals variable levels of epimeric glucobarbarins, dietary precursors of 5-phenyloxazolidine-2-thiones, in watercress types with contrasting chromosime numbers

      Agerbirk, Niels, Olsen, C. E., Cipollini, D., Ørgaard, Marian, Linde-Laursen, I. & Chew, F. S., 2014, In: Journal of Agricultural and Food Chemistry. 62, 39, p. 9586-9596 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    45. Published

      Øvelsesvejledning Biokemi 1

      Agerbirk, Niels & Bjergegaard, C., 2014, 10 ed. Institut for Fødevarevidenskab, Det Natur- og Biovidenskabelige Fakultet, Københavns Universitet.

      Research output: Book/Report › Compendium/lecture notes › Education

    46. 2012
    47. Published

      Glucosinolate structures in evolution

      Agerbirk, Niels & Olsen, C. E., 2012, In: Phytochemistry. 77, p. 16-45 30 p.

      Research output: Contribution to journal › Review › Research › peer-review

    48. Published

      Transient abiotic stresses lead to latent defense and reproductive responses over the Brassica rapa life cycle

      Steinbrenner, A. D., Agerbirk, Niels, Orians, C. M. & Chew, F. S., 2012, In: Chemoecology. 22, 4, p. 239-250 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    49. 2011
    50. Published

      Isoferuloyl derivatives of five seed glucosinolates in the crucifer genus Barbarea

      Agerbirk, Niels & Olsen, C. E., 2011, In: Phytochemistry. 72, p. 610-623 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    51. Published

      Polymorphism for novel tetraglycosylated flavonols in an eco-model crucifer, Barbarea vulgaris

      Dalby-Brown, L., Olsen, C. E., Nielsen, J. K. & Agerbirk, Niels, 2011, In: Journal of Agricultural and Food Chemistry. 59, 13, p. 6947-6956 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    52. Published

      Øvelsesvejledning: Biokemi 1

      Agerbirk, Niels & Bjergegaard, C., 2011, 7. ed. Institut for Grundvidenskab og Miljø, Københavns Universitet. 130 p.

      Research output: Book/Report › Compendium/lecture notes › Education

    53. 2010
    54. Published

      Complex metabolism of aromatic glucosinolates in Pieris rapae caterpillars involving nitrile formation, hydroxylation, demethylation, sulfation, and host plant dependent carboxylic acid formation

      Agerbirk, Niels, Olsen, C. E., Poulsen, E., Jacobsen, Niels & Hansen, Paul Robert, 2010, In: Insect Biochemistry and Molecular Biology. 40, 2, p. 126-137 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    55. Published

      Leaf and floral parts feeding by orange tip butterfly larvae depends on larval position but not on glucosinolate profile or nitrogen level

      Agerbirk, Niels, Chew, F. S., Olsen, C. E. & Jørgensen, Kirsten, 2010, In: Journal of Chemical Ecology. 36, 12, p. 1335-1345 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    56. Published

      Variable glucosinolate profiles of Cardamine pratensis (Brassicaceae) with equal chromosome numbers

      Agerbirk, Niels, Olsen, C. E., Chew, F. S. & Ørgaard, Marian, 2010, In: Journal of Agricultural and Food Chemistry. 58, 8, p. 4693-4700 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    57. Published

      Øvelsesvejledning: Biokemi 1

      Bjergegaard, C. & Agerbirk, Niels, 2010, 6. ed. Institut for Grundvidenskab og Miljø, Københavns Universitet. 125 p.

      Research output: Book/Report › Compendium/lecture notes › Education

    58. 2009
    59. Published

      Indole glucosinolate breakdown and its biological effects

      Agerbirk, Niels, De Vos, M., Kim, J. H. & Jander, G., 2009, In: Phytochemistry Reviews. 8, 1, p. 101-120 20 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    60. Published

      Øvelsesvejledning: Biokemi 1

      Bjergegaard, C. & Agerbirk, Niels, 2009, 5. ed. Institut for Grundvidenskab og Miljø, Københavns Universitet.

      Research output: Book/Report › Compendium/lecture notes › Education

    61. 2008
    62. Published

      Sinapis phylogeny and evolution of glucosinolates and specific nitrile degrading enzymes

      Agerbirk, Niels, Warwick, S. I., Hansen, Paul Robert & Olsen, C. E., 2008, In: Phytochemistry. 69, 17, p. 2937-2949 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    63. Published

      Aurora-larvens korte liv fulgt i en vindueskarm: nogle iagttagelser af larvens adfærd og udvikling

      Agerbirk, Niels & Jørgensen, Kirsten, 2008, In: Lepidoptera. 9, 6, p. 176-180 5 p.

      Research output: Contribution to journal › Journal article › Research

    64. Published

      Evolution of glucosinolates in Sinapis & Brassica

      Agerbirk, Niels, Warwick, S. I. & Olsen, C. E., 2008.

      Research output: Contribution to conference › Poster › Research

    65. Published

      Exercises in enzymology and experimental biochemistry: accuracy and precision in enzymology, activity coefficients in enzymology, macromolecule-ligand dissociation constants

      Agerbirk, Niels, 2008, Department of Natural Sciences, University of Copenhagen. 34 p.

      Research output: Book/Report › Compendium/lecture notes › Education

    66. Published

      Øvelsesvejledning: Biokemi 1

      Bjergegaard, C. & Agerbirk, Niels, 2008, 4 ed. Institut for Grundvidenskab og Miljø, Københavns Universitet.

      Research output: Book/Report › Compendium/lecture notes › Education

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